Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rattus_20norvegicus_20[refseq_20GCF_5F000001895.5_202014-07-01] 955 sequences; 2,870,184,193 total letters Query= NC_015049.1 Length=124335 Score E Sequences producing significant alignments: (Bits) Value seq301 96.9 3e-15 seq774 86.0 5e-12 >seq301 Length=56205956 Score = 96.9 bits (106), Expect = 3e-15 Identities = 166/241 (69%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || ||||| ||||| | | ||| || | | | || Sbjct 1816552 CCTCATGCTCCACATGGCATGTGTATTTCTGCTCCTCTCCAGAAGGCACCACCACAGATG 1816611 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || | || |||| ||||| || ||| | | | Sbjct 1816612 CCCACTTCTGGAAGGTTCCATCCCCTGAAGGCTTGGTCTCCACAAGCTCCATGTCCTGGG 1816671 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| |||| ||| ||||| ||||| |||||||| || Sbjct 1816672 TCAGGTCCTCCCCATTCAACTGCCAGGTTAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 1816731 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTGTG 588 ||||||| | || || || | || |||||| ||| || |||||| || ||| || Sbjct 1816732 CCCAACACCTCAGGGTGACATCACCTTCAGGTCTTGGGTGAAGGGTCACATGTGCCTTTG 1816791 Query 589 G 589 | Sbjct 1816792 G 1816792 Score = 96.9 bits (106), Expect = 3e-15 Identities = 166/241 (69%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||||| ||| | || || || || ||||| || | ||| || ||| | || Sbjct 4932886 CCTCATGTTCCACAAGGCATGTGTAATTCTGCTCCTTCCCAGGAGGCACCACTACAGATG 4932945 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| ||||| || ||| | | | Sbjct 4932946 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATGTCCTGGG 4933005 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 4933006 TCAGGTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 4933065 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTGTG 588 |||| || | || || || | || |||||| | | || |||||| || ||| || Sbjct 4933066 CCCAGCACCTCAGGGTGACATCACCTTCAGGTCTGGGGTGAAGGGTCACATGTGCCTTTG 4933125 Query 589 G 589 | Sbjct 4933126 G 4933126 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | |||| | || || ||||| ||||| | | ||| || | | | || Sbjct 3249159 CCTCATGCTCTACACGGCATGTGTATTTCTGCTCCTCTCCAGAAGGCACCACCACAGATG 3249100 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| ||||| || ||| | | | Sbjct 3249099 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATTTCCTGGG 3249040 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 3249039 TCAGGTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 3248980 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGT 560 |||| || | ||||| || | || |||||| Sbjct 3248979 CCCAGCACCTCAGTGTGACATCACCTTCAGGT 3248948 Score = 93.3 bits (102), Expect = 3e-14 Identities = 179/260 (69%), Gaps = 8/260 (3%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | |||||||| || ||||| ||||| | | ||| || | | | || Sbjct 2078157 CCTCATGGTACACATGACAAGTGTATTTCTGCTCCTCCCCAGAAGGCACCACCACAGATG 2078098 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| ||||| || ||| | | | Sbjct 2078097 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATGTCCTGTG 2078038 Query 469 TCAGTTGCT-CTGCTC-----CCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAG- 521 |||||| || || ||| || ||||| || | ||| ||||| ||||| |||||| Sbjct 2078037 TCAGTTCCTCCTCCTCCTCCTCCTCCTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGT 2077978 Query 522 CCAGTGGCCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGA 581 |||| ||||||||| | || || | | || |||||| | | || |||||| || Sbjct 2077977 CCAG-GGCCCAACACCTCAGGGTGGCATCACCTTCAGGTCTGGGGTGATGGGTCACATGT 2077919 Query 582 ACCTGTGGAGAAACTAAAGA 601 || ||| | | || |||| Sbjct 2077918 GTCTTTGGGGGATCTGAAGA 2077899 Score = 93.3 bits (102), Expect = 3e-14 Identities = 165/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || || || |||| | | ||| ||| | | |||| Sbjct 3177988 CCTCATGCTCCACATGGCATGTGTACTTCAGCTCCTCCCCAGAAGGCACTACCACAGCTG 3177929 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| ||||| || ||| | | | Sbjct 3177928 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATGTCCTGGG 3177869 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 3177868 TCAGGTCCTCCCCATTCAATTGCCAGGTCAAGGTGATGTCAGCAGGGTAGAAGCCCAGGG 3177809 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTGTG 588 |||| || | || || || | || |||||| | | || |||||| || ||| || Sbjct 3177808 CCCAGCACCTCAGGGTGACATCACCTTCAGGTCTGGGGTGAAGGGTCACATGTGCCTTTG 3177749 Query 589 G 589 | Sbjct 3177748 G 3177748 Score = 91.5 bits (100), Expect = 1e-13 Identities = 166/243 (68%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | |||| | || || || || ||||| || |||||| | | | || Sbjct 3232551 CCTCATGCTCTACACGGCATGTGTACTTCTGCTCCTTCCCAAGAGGTACCACCACAGATG 3232492 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| ||||| || ||| | | | Sbjct 3232491 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATGTCCTGGG 3232432 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 3232431 TCAGGTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 3232372 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTGTG 588 |||| || | || || || | || |||||| | | || | |||||| ||||| Sbjct 3232371 CCCAGCACCTCAGGGTCACATCACCTTCAGGTCTGGGGTGGCATGTCACGGTTGTCTGTG 3232312 Query 589 GAG 591 ||| Sbjct 3232311 GAG 3232309 Score = 87.8 bits (96), Expect = 1e-12 Identities = 164/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || ||||| ||||| || ||| || | | | || Sbjct 2541191 CCTCATGCTCCACATGGCATGTGTATTTTTGCTCCTTCCCAAGAGGCACCACCACAGATG 2541250 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| ||||| || ||| | | | Sbjct 2541251 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATGTCCTGGG 2541310 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| || | | | ||||| ||||| |||||||| || Sbjct 2541311 TCAGGTCCTCCCCATTCAACTGCCAGGTCAGGATGATGTCAGCAGGGTAGAAGCCCAGGG 2541370 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTGTG 588 |||| || | || || || | || |||||| | | || |||||| || ||| || Sbjct 2541371 CCCAGCACCTCAGGGTGACATCACCTTCAGGTCTGGGGTGAAGGGTCACATGTGCCTTTG 2541430 Query 589 G 589 | Sbjct 2541431 G 2541431 Score = 87.8 bits (96), Expect = 1e-12 Identities = 164/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||| | || || || || ||||| || ||| || | | |||| Sbjct 2705170 CCTCATGCTCCACAAGGCATGTGTAATTCTGCTCCTTCCCAAGAGGCACCACCACAGCTG 2705229 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| ||||| || ||| | | | Sbjct 2705230 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATGTCCTGGG 2705289 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 2705290 TCAGGTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 2705349 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTGTG 588 |||| || | || || || | || |||||| | | || |||||| || ||| || Sbjct 2705350 CCCAGCACCTCAGGGTGACATCACCTTCAGGTCTGGGGTGAAGGGTCACATGTGCCTTTG 2705409 Query 589 G 589 | Sbjct 2705410 G 2705410 Score = 87.8 bits (96), Expect = 1e-12 Identities = 164/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || || || ||||| || | ||| || | | | || Sbjct 4675486 CCTCATGCTCCACATGGCATGTGTAATTCTGCTCCTTCCCAGAAGGCACCACCACAGATG 4675545 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| ||||| || ||| | | | Sbjct 4675546 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATGTCCTGGG 4675605 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 4675606 TCAGGTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 4675665 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTGTG 588 |||| || | || || || | || ||| || | | || |||||| || ||| || Sbjct 4675666 CCCAGCACCTCAGGGTCACATCACCTTCATGTCTGGGGTGAAGGGTCACATGTGCCTTTG 4675725 Query 589 G 589 | Sbjct 4675726 G 4675726 Score = 87.8 bits (96), Expect = 1e-12 Identities = 164/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||| | || || || || ||||| || | ||| || | | | || Sbjct 4696498 CCTCATGCTCCACACGGCATGTGTAATTCTGCTCCTTCCCAGGAGGCACCACCACAGATG 4696557 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| ||||| || ||| | | | Sbjct 4696558 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATGTCCTGGG 4696617 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 4696618 TCAGGTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 4696677 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTGTG 588 |||| || | || || || | || |||||| | | || |||||| || ||| || Sbjct 4696678 CCCAGCACCTCAGGGTGACATCACCTTCAGGTCTGGGGTGAAGGGTCACATGTGCCTTTG 4696737 Query 589 G 589 | Sbjct 4696738 G 4696738 Score = 87.8 bits (96), Expect = 1e-12 Identities = 129/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 407 TGCCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATC 466 |||||||||||| || |||||||| || || || ||||| ||||| || ||| | || Sbjct 5353803 TGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATGTCCTC 5353744 Query 467 AGTCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGT 526 ||||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| Sbjct 5353743 GGTCAGGTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAG 5353684 Query 527 GGCCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTG 586 |||||| || | || || || | || |||||| | | || |||||| || ||| Sbjct 5353683 GGCCCAGCACCTCAGGGTGACATCACCTTCAGGTCTGGGGTGAAGGGTCACATGTGCCTT 5353624 Query 587 TGG 589 ||| Sbjct 5353623 TGG 5353621 Score = 87.8 bits (96), Expect = 1e-12 Identities = 164/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||| | || || || || ||||| || ||| || | | | || Sbjct 5377235 CCTCATGCTCCACACGGCATGTGTAATTCTGCTCCTTCCCAAGAGGCACCACCACAGATG 5377176 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 ||||||||||||| |||||||| || || || ||||| ||||| || ||| | | | Sbjct 5377175 CCCACTTCTGAAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATGTCCTGGG 5377116 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 5377115 TCAGGTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 5377056 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTGTG 588 |||| || | || || || | || |||||| | | || |||||| || ||| || Sbjct 5377055 CCCAGCACCTCAGGGTGACATCACCTTCAGGTCTGGGGTGAAGGGTCACATGTGCCTCTG 5376996 Query 589 G 589 | Sbjct 5376995 G 5376995 Score = 87.8 bits (96), Expect = 1e-12 Identities = 164/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||| | || || || || ||||| || |||||| | | | || Sbjct 5416711 CCTCATGCTCCACACGGCATGTGTAATTCTGCTCCTTCCCAAGAGGTACCACCACAGATG 5416652 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| ||||| || ||| | | | Sbjct 5416651 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATGTCCTGGG 5416592 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 5416591 TCAGGTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 5416532 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTGTG 588 |||| || | || || || | || |||||| | | || |||||| || ||| || Sbjct 5416531 CCCAGCACCTCAGGGTGACATCACCTTCAGGTCTGGGGTGAAGGGTCACATGTGCCTTTG 5416472 Query 589 G 589 | Sbjct 5416471 G 5416471 Score = 86.0 bits (94), Expect = 5e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 407 TGCCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATC 466 |||||||||||| || |||||||| || || || ||||| ||||| || ||| | | Sbjct 2059699 TGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATGTCCTG 2059640 Query 467 AGTCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGT 526 ||||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| Sbjct 2059639 GGTCAGGTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAG 2059580 Query 527 GGCCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTG 586 |||||| || | || || || | || |||||| | | || |||||| || ||| Sbjct 2059579 GGCCCAGCACCTCAGGGTGACATCACCTTCAGGTCTGGGGTGAAGGGTCACATGTGCCTT 2059520 Query 587 TGGAGAAACTAAAGA 601 ||| | | || |||| Sbjct 2059519 TGGGGGATCTGAAGA 2059505 Score = 86.0 bits (94), Expect = 5e-12 Identities = 161/237 (68%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || || || ||||| | | ||| || | | |||| Sbjct 2637737 CCTCATGCTCCACATGGCATGTGTACTTCTGCTCCTCCCCAGAAGGCACCACCACAGCTG 2637678 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| ||||| || ||| | | | Sbjct 2637677 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATGTCCTGGG 2637618 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| | Sbjct 2637617 TCAGGTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGAG 2637558 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCT 585 |||| || | || || || || |||||| | | || |||||| || |||| Sbjct 2637557 CCCAGCACCTCAGGGTGACACCACCTTCAGGTCTGGGGTGAAGGGTCACATGTACCT 2637501 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || || || ||||| || ||| || | | | || Sbjct 3196109 CCTCATGCTCCACATGGCATGTGTACTTCTGCTCCTTCCCAAGAGGCACCACCACAGATG 3196050 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| ||||| || ||| | | | Sbjct 3196049 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATTTCCTGGG 3195990 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 3195989 TCAGGTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 3195930 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGT 560 |||| || | || || || | || |||||| Sbjct 3195929 CCCAGCACCTCAGGGTGACATCACCTTCAGGT 3195898 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || || || ||||| || ||| || | | |||| Sbjct 3282028 CCTCATGCTCCACATGGCATGTGTACTTCTGCTCCTTCCCAAGAGGCACCACCACAGCTG 3281969 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || | || ||||| ||||| || ||| | | | Sbjct 3281968 CCCACTTCTGGAAGGTTCCATCCCCTGTAGGCCTGGTCTCCACAAGCTCCATGTCCTGGG 3281909 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 3281908 TCAGGTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 3281849 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGT 560 |||| || | || || || | || |||||| Sbjct 3281848 CCCAGCACCTCAGGGTGACATCACCTTCAGGT 3281817 Score = 86.0 bits (94), Expect = 5e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 405 GCTGCCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCA 464 |||||||||||||| || |||||||| || || || ||||| ||||| || ||| | Sbjct 4790017 GCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATGTCC 4790076 Query 465 TCAGTCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCA 524 | ||||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| Sbjct 4790077 TGGGTCAGGTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCC 4790136 Query 525 GTGGCCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACC 584 |||||| || | || || || | || |||||| | | || |||||| || || Sbjct 4790137 AGGGCCCAGCACCTCAGGGTGACATCACCTTCAGGTCTGGGGTGAAGGGTCACATGTGCC 4790196 Query 585 TGTGG 589 | ||| Sbjct 4790197 TTTGG 4790201 Score = 86.0 bits (94), Expect = 5e-12 Identities = 161/237 (68%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || || || ||||| | | ||| || | | |||| Sbjct 4919309 CCTCATGCTCCACATGGCATGTGTACTTCTGCTCCTCCCCAGAAGGCACCACCACAGCTG 4919368 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| ||||| || ||| | | | Sbjct 4919369 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATGTCCTGGG 4919428 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| | Sbjct 4919429 TCAGGTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGAG 4919488 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCT 585 |||| || | || || || || |||||| | | || |||||| || |||| Sbjct 4919489 CCCAGCACCTCAGGGTGACACCACCTTCAGGTCTGGGGTGAAGGGTCACATGTACCT 4919545 Score = 84.2 bits (92), Expect = 2e-11 Identities = 163/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||| | || || || || ||||| || ||| || | | | || Sbjct 4894080 CCTCATGCTCCACAAGGCATGTGTAATTCTGCTCCTTCCCAAGAGGCACCACCACAGATG 4894139 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| ||||| || ||| | | | Sbjct 4894140 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATGTCCTGGG 4894199 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 4894200 TCAGGTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 4894259 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTGTG 588 |||| || | || || || | || |||||| | | || |||||| || ||| || Sbjct 4894260 CCCAGCACCTCAGGGTCACATCACCTTCAGGTCTGGGGTGAAGGGTCACATGTGCCTTTG 4894319 Query 589 G 589 | Sbjct 4894320 G 4894320 >seq774 Length=15511 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||| || ||||| || ||||| || | ||| || | | | || Sbjct 13471 CCTCATGCTCCACACAGCATGTATAATTCTGCTCCTTCCCAGAAGGCACCACCACAGATG 13412 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| ||||| || ||| | | | Sbjct 13411 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATGTCCTGGG 13352 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 13351 TCAGGTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 13292 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGT 560 |||| || | || || || | || |||||| Sbjct 13291 CCCAGCACCTCAGGGTGACATCACCTTCAGGT 13260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397742570595480