Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rattus_20norvegicus_20[refseq_20GCF_5F000001895.5_202014-07-01] 955 sequences; 2,870,184,193 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq206 127 5e-24 seq97 118 2e-21 seq1 109 1e-18 seq312 96.9 8e-15 seq55 96.9 8e-15 seq301 95.1 3e-14 seq258 95.1 3e-14 seq286 91.5 3e-13 seq243 87.8 4e-12 >seq206 Length=52716770 Score = 127 bits (140), Expect = 5e-24 Identities = 164/225 (73%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | | || ||||| || |||||||| || || || |||||||| | || || Sbjct 36641128 TCTGAGGCGAAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCTGACAGGGT 36641069 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| |||||||| ||||| ||||| || | || ||||| || || ||||| Sbjct 36641068 GCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCC 36641009 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095 || ||||| || || ||| |||||| || ||||||||||| ||| || || || Sbjct 36641008 CTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTC---ACTGGGCTCGACCTC 36640952 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| ||||||| || || || || | ||||| Sbjct 36640951 CAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36640907 Score = 127 bits (140), Expect = 5e-24 Identities = 164/225 (73%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | || || ||||| || |||||||| || || || ||||| || | || || Sbjct 36641584 TCTGAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGT 36641525 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| |||||||| ||||| ||||| || | || ||||| || || ||||| Sbjct 36641524 GCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCC 36641465 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095 || ||||| || || ||| |||||| || ||||||||||| ||| || || || Sbjct 36641464 CTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTC---ACTGGGCTCGACCTC 36641408 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| ||||||| || || || || | ||||| Sbjct 36641407 CAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36641363 Score = 127 bits (140), Expect = 5e-24 Identities = 164/225 (73%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | || || ||||| || |||||||| || || || ||||| || | || || Sbjct 36642040 TCTGAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGT 36641981 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| |||||||| ||||| ||||| || | || ||||| || || ||||| Sbjct 36641980 GCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCC 36641921 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095 || ||||| || || ||| |||||| || ||||||||||| ||| || || || Sbjct 36641920 CTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTC---ACTGGGCTCGACCTC 36641864 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| ||||||| || || || || | ||||| Sbjct 36641863 CAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36641819 Score = 127 bits (140), Expect = 5e-24 Identities = 164/225 (73%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | || || ||||| || |||||||| || || || ||||| || | || || Sbjct 36642496 TCTGAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGT 36642437 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| |||||||| ||||| ||||| || | || ||||| || || ||||| Sbjct 36642436 GCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCC 36642377 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095 || ||||| || || ||| |||||| || ||||||||||| ||| || || || Sbjct 36642376 CTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTC---ACTGGGCTCGACCTC 36642320 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| ||||||| || || || || | ||||| Sbjct 36642319 CAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36642275 Score = 123 bits (136), Expect = 6e-23 Identities = 163/225 (72%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | | || ||||| || |||||||| || || || ||||| || | || || Sbjct 36641356 TCTGAGGCGAAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGT 36641297 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| |||||||| ||||| ||||| || | || ||||| || || ||||| Sbjct 36641296 GCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCC 36641237 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095 || ||||| || || ||| |||||| || ||||||||||| ||| || || || Sbjct 36641236 CTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTC---ACTGGGCTCGACCTC 36641180 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| ||||||| || || || || | ||||| Sbjct 36641179 CAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36641135 Score = 123 bits (136), Expect = 6e-23 Identities = 163/225 (72%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | | || ||||| || |||||||| || || || ||||| || | || || Sbjct 36642268 TCTGAGGCGAAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGT 36642209 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| |||||||| ||||| ||||| || | || ||||| || || ||||| Sbjct 36642208 GCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCC 36642149 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095 || ||||| || || ||| |||||| || ||||||||||| ||| || || || Sbjct 36642148 CTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTC---ACTGGGCTCGACCTC 36642092 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| ||||||| || || || || | ||||| Sbjct 36642091 CAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36642047 Score = 120 bits (132), Expect = 7e-22 Identities = 163/226 (72%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | | || ||||| | |||||||| || || || ||||| || | || || Sbjct 36640444 TCTGAGGCGAAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGT 36640385 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| |||||||| ||||| ||||| || | || ||||| || || ||||| Sbjct 36640384 GCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCC 36640325 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095 || ||||| || || ||| |||||| || ||||||||||| ||| || || || Sbjct 36640324 CTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTC---ACTGGGCTCGACCTC 36640268 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||||| | ||||| || || || ||||| || || | |||||| Sbjct 36640267 CAGGGTGATGGTCTTACCAGTTAAGGTTTTCACAAAGATCTGCATT 36640222 Score = 118 bits (130), Expect = 2e-21 Identities = 162/225 (72%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | | || ||||| | |||||||| || || || ||||| || | || || Sbjct 36640672 TCTGAGGCGAAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGT 36640613 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| |||||||| ||||| ||||| || | || ||||| || || ||||| Sbjct 36640612 GCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCC 36640553 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095 || ||||| || || ||| |||||| || ||||||||||| ||| || || || Sbjct 36640552 CTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTC---ACTGGGCTCGACCTC 36640496 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| ||||||| || || || || | ||||| Sbjct 36640495 CAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36640451 Score = 118 bits (130), Expect = 2e-21 Identities = 162/225 (72%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | | || ||||| | |||||||| || || || ||||| || | || || Sbjct 36640900 TCTGAGGCGAAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGT 36640841 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| |||||||| ||||| ||||| || | || ||||| || || ||||| Sbjct 36640840 GCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCC 36640781 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095 || ||||| || || ||| |||||| || ||||||||||| ||| || || || Sbjct 36640780 CTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTC---ACTGGGCTCGACCTC 36640724 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| ||||||| || || || || | ||||| Sbjct 36640723 CAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36640679 Score = 118 bits (130), Expect = 2e-21 Identities = 162/225 (72%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | | || ||||| | |||||||| || || || ||||| || | || || Sbjct 36641812 TCTGAGGCGAAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGT 36641753 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| |||||||| ||||| ||||| || | || ||||| || || ||||| Sbjct 36641752 GCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCC 36641693 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095 || ||||| || || ||| |||||| || ||||||||||| ||| || || || Sbjct 36641692 CTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTC---ACTGGGCTCGACCTC 36641636 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| ||||||| || || || || | ||||| Sbjct 36641635 CAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36641591 >seq97 Length=173707219 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||||| || || || ||||||||||| |||||||| ||||| || | | ||| | Sbjct 138628767 AGTCTCAGCACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGG 138628826 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| | ||||||||| || ||||| | | || || || |||||||| ||||| Sbjct 138628827 CCATCTTCCAACTGCTTACCAGCAAAGATCAACCTCTGCTGATCAGGAGGAATTCCTTCC 138628886 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 || || || || || ||| || || || || |||||||| ||| || || || || Sbjct 138628887 TTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTG 138628946 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| ||||| | || || || || | ||||| Sbjct 138628947 ATGGTCTTCCCTGTAAGGGTCTTCACAAAAATCTGCAT 138628984 Score = 109 bits (120), Expect = 1e-18 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||||| || || || ||||||||||| |||||||| ||||| || | | ||| | Sbjct 159895314 AGTCTCAGCACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGG 159895255 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| ||||||||||| || ||||| | | || || || |||||| | ||||| Sbjct 159895254 CCATCTTCTAGCTGCTTACCAGCAAAGATCAACCTCTGCTGATCAGGAGGAGTTCCTTCC 159895195 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 | || || || || ||| || || || || |||||||| ||| || | || || Sbjct 159895194 TCATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTTGAGCGTG 159895135 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACT-TGCAT 195140 | ||||| ||| | | || ||||| || ||| ||||| Sbjct 159895134 ATGGTCTTCCCTATAAGGGTCTTTAC-AAAACTCTGCAT 159895097 >seq1 Length=282763074 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||||| || || || ||||||||||| |||||||| ||||| || | | ||| | Sbjct 255573160 AGTCTCAGCACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGG 255573219 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||| |||| ||||||||||| || |||| | | || || || |||||| | |||| Sbjct 255573220 CCACCTTCCAGCTGCTTACCAGCAAAGACCAACCTCTGCTGATCAGGAGGAGTTTCTTCC 255573279 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 || || || || || ||| || || || || |||||||| ||| ||||| || || Sbjct 255573280 TTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACTTCGAGCGTG 255573339 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| ||||| | || || || || | ||||| Sbjct 255573340 ATGGTCTTCCCTGTAAGGGTCTTCACAAAAATCTGCAT 255573377 Score = 96.9 bits (106), Expect = 8e-15 Identities = 151/212 (71%), Gaps = 8/212 (4%) Strand=Plus/Minus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 ||||| || | |||||||| || || |||| ||| | |||||| || |||||| ||| Sbjct 220631919 AGGTGCAGGGCTGACTCTTTCTGGATGTTGTGATCAGAAAGAGTGGGCC-ATCTTCCAGC 220631861 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCT-GGAGGAATGCCTTCTTTGTCTTGAAT 195053 ||||| ||||| ||| | || | || || | | || ||| |||| ||||| | || || Sbjct 220631860 TGCTTGCCTGCAAAGGTGAGCCTCTGCTGTTGTTGGTGGAGTGCCCTCTTTATTCTGGAT 220631801 Query 195054 TTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTT 195110 || |||| | | ||||||||||||| ||| |||| ||| ||||| | ||||| Sbjct 220631800 CTTGGGCTTCATGATCTCAATGGTGTC---ACTGGGCTCCAATTCTAGGGTGATGGTCTT 220631744 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 | |||| || || || || | |||||||| Sbjct 220631743 GCTGGTCAGGGTCTTCACAAAGATTTGCATTT 220631712 >seq312 Length=159970021 Score = 96.9 bits (106), Expect = 8e-15 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||||| || || || || ||||||| |||||||| ||||| || | | ||| | Sbjct 37026622 AGTCTCAGCACGAGATGGAGCATGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGG 37026563 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| ||||||||||| || |||| | | || || || |||||||| ||||| Sbjct 37026562 CCATCTTCTAGCTGCTTACCAGCAAAGACCAACCTCTGCTGATCAGGAGGAATTCCTTCC 37026503 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 | || || || || ||| || || || || |||||||| ||| || ||||| Sbjct 37026502 TCATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCAAG 37026447 Score = 84.2 bits (92), Expect = 5e-11 Identities = 159/229 (69%), Gaps = 5/229 (2%) Strand=Plus/Minus Query 125524 CTTCCAAAGAAACACGGCAGGGGAGGACAATCTGCTTTGCGTTTTGAGAGACTTCGAAAA 125583 || ||||||||||||||||| ||||| ||||| || ||||| |||| | | ||| Sbjct 66668186 CTCCCAAAGAAACACGGCAGAGGAGGTCAATCAGCCTTGCG-TTTGCCCGTTTAAGAATG 66668128 Query 125584 GAAAAGAGACACAACTATTTGAGGAAAGTCGCAGAGAATGCAACTCAA--TGTTTTTTGC 125641 |||||| |||| |||||| | |||||| ||||||| ||| | || ||||| || | Sbjct 66668127 GAAAAGCGACATAACTATGTTCAGAAAGTAGCAGAGACTGC-TGTGAAGCTGTTTATTTC 66668069 Query 125642 AAGACAACAAGTGCAACGTCATTGGGATTGTCATTGCTGGATCGGCAGAGTTCAAAACAA 125701 || | ||||| || || | ||| | || | |||||||| || || || ||||| Sbjct 66668068 TGGAGACAAAGTG-AATGTGACTGGTTTGGTTTTAGCTGGATCAGCTGACTTTAAAACTG 66668010 Query 125702 AGCTTCTGGAATCTGACCTTTTCGACCAAAGACTTCGAACAAAAGTCTT 125750 | || |||||||| | | ||||| || | | | | ||||| || Sbjct 66668009 AACTAAGTCAATCTGACATGTCTGACCAGAGGTTGCAATCTAAAGTTTT 66667961 >seq55 Length=177699992 Score = 96.9 bits (106), Expect = 8e-15 Identities = 136/190 (72%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 194926 CTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCA 194985 |||| || || || ||||||||||| |||||||| ||||| || | | | | | ||| Sbjct 38853847 CTCAGCACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCTG--ACAATACGGCCA 38853904 Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045 ||||| |||||||||| || ||||| | | ||| || || |||||||| ||||| || Sbjct 38853905 TCTTCTGGCTGCTTACCAGCAAAGATCAACCTTTGCTGATCAGGAGGAATTCCTTCCTTA 38853964 Query 195046 TCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACC 195105 || || || || ||| || | || || |||||||| ||| || || || | | Sbjct 38853965 TCCTGGATCTTGGCCTTTACATCTTCTATAGTGTCCGAGGGTTCAACCTCGAGCATGATG 38854024 Query 195106 GTCTTTCCTG 195115 ||||| |||| Sbjct 38854025 GTCTTCCCTG 38854034 >seq301 Length=56205956 Score = 95.1 bits (104), Expect = 3e-14 Identities = 131/182 (72%), Gaps = 1/182 (1%) Strand=Plus/Minus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 || || ||||||||||| |||||| | ||| | || | | ||| | |||||||| || Sbjct 23716581 AGATGGAGAGTGGACTCCTTTTGA-TGTTGCAGTCAGACAAAGTACGGCCATCTTCTAGT 23716523 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATT 195054 |||||||| || ||||| | | || | || |||||||| ||||| || || || || Sbjct 23716522 TGCTTACCAGCCAAGATCAACCTCTGCAGATCAGGAGGAATTCCTTCCTTATCCTGGATC 23716463 Query 195055 TTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114 || ||| || || || || |||||||| ||| || || || || | ||||||||| Sbjct 23716462 TTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATAGTCTTTCCT 23716403 Query 195115 GT 195116 || Sbjct 23716402 GT 23716401 >seq258 Length=90668790 Score = 95.1 bits (104), Expect = 3e-14 Identities = 139/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||||| || || || ||||||||||| ||||| || ||||| || | | ||| | Sbjct 52656924 AGTCTCAGCACGAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTACGG 52656983 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| ||||||||||| | |||| || | || || || |||||||| ||||| Sbjct 52656984 CCATCTTCCAGCTGCTTACCAACAAAGA-AAACCCCTGCTGATCAGGAGGAATTCCTTCC 52657042 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 | || || || || ||| |||| || || |||||||| || | ||||| || Sbjct 52657043 TCATCCTGGATGTTGACCTTTCCGTTTTCTATAGTGTCCGAGGGGTCAATCTCAAGTGTG 52657102 Query 195103 ACCGTCTTTCCTGT 195116 | ||| ||||||| Sbjct 52657103 ATGGTC-TTCCTGT 52657115 Score = 89.7 bits (98), Expect = 1e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||||| || || || ||||||||||| |||||||| ||||| || | | ||| | Sbjct 53113516 AGTCTCAGCACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGG 53113575 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 |||||||| ||||||||||| | |||| || | || ||||| |||||| | ||||| Sbjct 53113576 CCATCTTCCAGCTGCTTACCAACAAAGACCAGCCTCTGCTGGTCAGGAGGAGTTCCTTC 53113634 >seq286 Length=88201929 Score = 91.5 bits (100), Expect = 3e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||||| || || || ||||||||||| ||||||| ||||| || | | ||| | Sbjct 25394598 AGTCTCAGCACGAGATGGAGAGTGGACTCCTTTTGAACGTTGTAGTCAGACAAAGTACGG 25394657 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||| |||| ||||||||||| ||||| | | | ||| || || |||||| | ||||| Sbjct 25394658 CCACCTTCCAGCTGCTTACCAGCGAATGTCAACCTTTGCTGATCAGGAGGAGTTCCTTCC 25394717 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 | || || || | ||| || || || || |||||||| ||| || || || | Sbjct 25394718 TCATCCTGGATCTGGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCATG 25394777 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| ||| | | || || || || | ||||| Sbjct 25394778 ATGGTCTTCCCTATAAGGGTCTTCACAAAAATCTGCAT 25394815 >seq243 Length=111246239 Score = 87.8 bits (96), Expect = 4e-12 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||| || || || || | ||||||||||| || || ||| || | ||||| | Sbjct 82529576 AGTCGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGCTGTCAGACAGAGTGCGG 82529517 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| || || | || || | ||| || || | || ||||| || || |||||||| Sbjct 82529516 CCATCCTCCTGCCGTTTGCCAGAGAATATCAGCCTCTGCTGGTCAGGTGGGATGCCTTCC 82529457 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 |||||||| || || ||| || |||||||||||||| || || ||||| || Sbjct 82529456 TTGTCTTGGATCTTGGCCTTCACTTTCTCAATGGTGTCTCTGGGCTCGACCTCAAGAGTG 82529397 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCA 195139 | ||||| || ||| ||| || ||||| | |||| Sbjct 82529396 ATGGTCTTGCCCGTC--AGTCTTCACGAAGAACTGCA 82529362 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 125524 CTTCCAAAGAAACACGGCAGGGGAGGACAATCTGCTTTGCGTTTTGAGAGACTTCGAAAA 125583 || |||||||||||| |||| ||||| ||||| || |||||||||| | | ||| Sbjct 35199592 CTCCCAAAGAAACACAGCAGAGGAGGTCAATCAGCCTTGCGTTTTGCCCGTTTAAGAATG 35199651 Query 125584 GAAAAGAGACACAACTATTTGAGGAAAGTCGCAGAGAATGC 125624 |||||| |||| |||||| | ||||||| ||||||| ||| Sbjct 35199652 GAAAAGCGACATAACTATGTTCGGAAAGTAGCAGAGACTGC 35199692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109468024452485