Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rattus_20norvegicus_20[refseq_20GCF_5F000001895.5_202014-07-01] 955 sequences; 2,870,184,193 total letters Query= NC_016763.1 Length=43221 Score E Sequences producing significant alignments: (Bits) Value seq490 136 1e-27 >seq490 Length=1652 Score = 136 bits (150), Expect = 1e-27 Identities = 81/85 (95%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 32120 GAAACGAAAAAACCGCCTCCCCAGGCGGTTTTTTCGAGGGTTCAGTAAGTTGGGGAACTT 32179 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 85 GAAACGAAAAAACCGCCTGGGGAGGCGGTTTTTTCGAGGGTTCAGTAAGTTGGGGAACTT 26 Query 32180 CTGAACCGTGGTAACAGGGTGTACA 32204 ||||||||||||||||||||||||| Sbjct 25 CTGAACCGTGGTAACAGGGTGTACA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138184032888930