Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rattus_20norvegicus_20[refseq_20GCF_5F000001895.5_202014-07-01] 955 sequences; 2,870,184,193 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq97 140 3e-28 seq1 125 6e-24 seq312 114 1e-20 seq206 113 4e-20 seq55 113 4e-20 seq301 107 2e-18 seq286 104 2e-17 seq31 91.5 1e-13 seq174 89.7 5e-13 seq297 84.2 2e-11 seq166 84.2 2e-11 >seq97 Length=173707219 Score = 140 bits (154), Expect = 3e-28 Identities = 170/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 ||||||||||| ||| | || || || || || || || || |||||||| || ||| || Sbjct 138628987 ACGATGCAGATTTTTGTGAAGACCCTTACAGGGAAGACCATCACGCTCGAGGTTGAACCC 138628928 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| |||||| ||||| |||||||| || || |||||||| ||||| ||| Sbjct 138628927 TCGGACACTATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 138628868 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || | ||||||||||| || || ||| |||| ||| | | |||| || || Sbjct 138628867 CAGCAGAGGTTGATCTTTGCTGGTAAGCAGTTGGAAGATGGCCGTACTTTGTCTGACTAC 138628808 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 |||||||||||||| || || || || | ||| || || | || || |||| Sbjct 138628807 AACATTCAAAAGGAGTCCACTCTCCATCTCGTGCTGAGACTTCGTGGTGGCG 138628756 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 |||||||||| ||| | || || || | || || || || |||||| | || ||| || Sbjct 159895094 ACGATGCAGAGTTTTGTAAAGACCCTTATAGGGAAGACCATCACGCTCAAGGTTGAACCC 159895153 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| |||||| ||||| |||||||| || | ||||||| ||||| ||| Sbjct 159895154 TCGGACACTATAGAAAATGTAAAGGCCAAGATCCAGGATGAGGAAGGAACTCCTCCTGAT 159895213 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || | ||||||||||| || || ||||| || ||| | | |||| || || Sbjct 159895214 CAGCAGAGGTTGATCTTTGCTGGTAAGCAGCTAGAAGATGGCCGTACTTTGTCTGACTAC 159895273 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 |||||||||||||| || || || || | ||| || || | || || ||| Sbjct 159895274 AACATTCAAAAGGAGTCCACTCTCCATCTCGTGCTGAGACTTCGTGGTGGC 159895324 Score = 84.2 bits (92), Expect = 2e-11 Identities = 152/219 (69%), Gaps = 5/219 (2%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||| || ||| | || ||||| | || || || | | |||||| || ||| || | Sbjct 49813858 GATGCTGACTTTTGTGAAGACGCTTATGGGGAAGACCGTAA-GCTCGAGGTTGAACCCTC 49813800 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| |||||| ||||| |||||||| || | ||||| | ||||| ||||| Sbjct 49813799 GGACACTATAGAAAATGTAAAGGCCAAGATCCAGGATGAGGAAGGCGTTCCTCCTGATCA 49813740 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | ||||||||||| ||||| ||| |||| ||| | | ||| || || || Sbjct 49813739 GCAGAGGTTGATCTTTGCTGGGAAGCAGATGGAAGATGGCTGTA--CTGT--GACTACAA 49813684 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 |||||||| || || | || || | |||||| |||| Sbjct 49813683 CATTCAAATGGTGTCCAACCTTCATGTTGTGTTGAGATT 49813645 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || ||||| || || || || || || || || ||| Sbjct 138042730 ATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 138042789 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || ||||| || || || || || || Sbjct 138042790 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAGGGCATCCCCCCTGACCAG 138042849 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | ||||||||||| || |||||||| ||| | | | | || ||||| ||| Sbjct 138042850 CAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGATTACAAC 138042909 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || || || || || || ||| |||| Sbjct 138042910 ATCCAGAAAGAGTCAACCCTGCACCTGGT 138042938 >seq1 Length=282763074 Score = 125 bits (138), Expect = 6e-24 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 ||||||||||| ||| | || || || || || || || || ||||||||||| ||| || Sbjct 255573380 ACGATGCAGATTTTTGTGAAGACCCTTACAGGGAAGACCATCACGCTCGAAGTTGAACCC 255573321 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| |||||| ||||| |||||||| || || |||| || ||||| ||| Sbjct 255573320 TCGGACACTATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGAAACTCCTCCTGAT 255573261 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || | ||| ||||||| || || |||||||| | | | | |||| || || Sbjct 255573260 CAGCAGAGGTTGGTCTTTGCTGGTAAGCAGCTGGAAGGTGGCCGTACTTTGTCTGACTAC 255573201 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 |||||||||||||| || || || || | ||| || || | | || |||| Sbjct 255573200 AACATTCAAAAGGAGTCCACTCTCCATCTCGTGCTGAGACTTCATGGTGGCG 255573149 Score = 86.0 bits (94), Expect = 6e-12 Identities = 123/173 (71%), Gaps = 4/173 (2%) Strand=Plus/Plus Query 24755 GAAGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCT 24814 ||| || | ||||| ||||| ||||| |||||||| || || |||||||| || Sbjct 154824660 GAACCCTCAGACACTAAAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATCCCC 154824719 Query 24815 CCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCA 24874 | ||||| || | ||||||||||| || | |||||||| ||| | | ||| Sbjct 154824720 TCTGATCAGCAGAGATTGATCTTTGCTGGTTAGCAGCTGGAAGATGGCTGTA----GTCT 154824775 Query 24875 GATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGG 24927 || || |||||||||||||| || || || || | |||||| |||| || || Sbjct 154824776 GACTACAACATTCAAAAGGAGTCTACCCTTCATCTTGTGTTGAGATTTCGTGG 154824828 Score = 86.0 bits (94), Expect = 6e-12 Identities = 123/173 (71%), Gaps = 4/173 (2%) Strand=Plus/Plus Query 24755 GAAGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCT 24814 ||| || | ||||| ||||| ||||| |||||||| || || |||||||| || Sbjct 154914764 GAACCCTCAGACACTAAAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATCCCC 154914823 Query 24815 CCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCA 24874 | ||||| || | ||||||||||| || | |||||||| ||| | | ||| Sbjct 154914824 TCTGATCAGCAGAGATTGATCTTTGCTGGTTAGCAGCTGGAAGATGGCTGTA----GTCT 154914879 Query 24875 GATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGG 24927 || || |||||||||||||| || || || || | |||||| |||| || || Sbjct 154914880 GACTACAACATTCAAAAGGAGTCTACCCTTCATCTTGTGTTGAGATTTCGTGG 154914932 >seq312 Length=159970021 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 24702 CGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA 24761 |||||||||| ||| | || || || || || || || | |||||||| | ||| || Sbjct 72456841 CGATGCAGATTTTTGTGAAGACCCTTACAGGGAAGACCCTCACGCTCGAGGCTGAACCCT 72456782 Query 24762 CCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 | ||||| |||||| ||||| |||||||| || | |||||||| ||||| ||| Sbjct 72456781 CAGACACTATAGAAAATGTAAAGGCCAAGATCCAGGATGAGGAAGGAATTCCTCCTGATG 72456722 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || | ||||||||||| || | |||||||| ||| | | |||| || || | Sbjct 72456721 AGCAGAGGTTGATCTTTGCTGGTGAGCAGCTGGAAGATGGCCGTACTTTGTCTGACTACA 72456662 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 ||||||||||||| || | || || ||||| || || | || | |||| Sbjct 72456661 ACATTCAAAAGGAGTCCATGCTCCATCTGGTGCTGAGACTTCGTAGTGGCG 72456611 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 24737 ACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAA 24796 || || | ||| || || ||| || | ||||| |||||| ||||| |||||||| Sbjct 37026438 ACCATCATGCTTGAGGTTGAACCCTCGGACACTATAGAAAATGTAAAGGCCAAGATCCAG 37026497 Query 24797 GACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAG 24856 || | |||||||| ||||| ||||| || | ||| ||||||| || || ||||| || Sbjct 37026498 GATGAGGAAGGAATTCCTCCTGATCAGCAGAGGTTGGTCTTTGCTGGTAAGCAGCTAGAA 37026557 Query 24857 GATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATC 24897 ||| | | |||| || || |||||||||||||| || Sbjct 37026558 GATGGCCGTACTTTGTCTGACTACAACATTCAAAAGGAGTC 37026598 >seq206 Length=52716770 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || |||||||||||| | ||||| |||| ||||| || || || || || || || || Sbjct 36640220 ACAATGCAGATCTTTGTGAAAACCTTAACTGGTAAGACCATCACCCTGGAGGTCGAGCCC 36640279 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | |||| || || ||||||||| ||||| || || || || || || Sbjct 36640280 AGTGACACCATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGAC 36640339 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || | |||||||||| || || |||||||| ||| | | | ||||||| || Sbjct 36640340 CAGCAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCAGACTAC 36640399 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| || ||||| || || | ||| |||| Sbjct 36640400 AACATCCAGAAGGAGTCCACCTTGCACCTGGT 36640431 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || || || || || ||| Sbjct 36640907 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTCGAGCCCAGT 36640966 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || ||||||||| ||||| || || || || || || || Sbjct 36640967 GACACCATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 36641026 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || |||||||| ||| | | | |||||||||| ||| Sbjct 36641027 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCAGATTACAAC 36641086 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || || ||| |||| Sbjct 36641087 ATCCAGAAGGAGTCCACCCTGCACCTGGT 36641115 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || || || || || ||| Sbjct 36642275 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTCGAGCCCAGT 36642334 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || ||||||||| ||||| || || || || || || || Sbjct 36642335 GACACCATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 36642394 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || |||||||| ||| | | | ||||||| || ||| Sbjct 36642395 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCAGACTACAAC 36642454 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| || || || ||| |||| |||| Sbjct 36642455 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCG 36642489 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || || || || || ||| Sbjct 36641135 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTCGAGCCCAGT 36641194 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || ||||||||| ||||| || || || || || || || Sbjct 36641195 GACACCATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 36641254 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || |||||||| ||| | | | ||||||| || ||| Sbjct 36641255 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCAGACTACAAC 36641314 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || || ||| |||| Sbjct 36641315 ATCCAGAAGGAGTCCACCCTGCACCTGGT 36641343 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || || || || || ||| Sbjct 36642047 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTCGAGCCCAGT 36642106 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || ||||||||| ||||| || || || || || || || Sbjct 36642107 GACACCATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 36642166 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || |||||||| ||| | | | ||||||| || ||| Sbjct 36642167 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCAGACTACAAC 36642226 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || || ||| |||| Sbjct 36642227 ATCCAGAAGGAGTCCACCCTGCACCTGGT 36642255 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || || || || || ||| Sbjct 36641363 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTCGAGCCCAGT 36641422 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || ||||||||| ||||| || || || || || || || Sbjct 36641423 GACACCATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 36641482 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || |||||||| ||| | | | |||| || || ||| Sbjct 36641483 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 36641542 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| || || || ||| |||| |||| Sbjct 36641543 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCG 36641577 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || || || || || ||| Sbjct 36641819 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTCGAGCCCAGT 36641878 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || ||||||||| ||||| || || || || || || || Sbjct 36641879 GACACCATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 36641938 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || |||||||| ||| | | | |||| || || ||| Sbjct 36641939 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 36641998 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| || || || ||| |||| |||| Sbjct 36641999 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCG 36642033 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || || || || || ||| Sbjct 36640451 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTCGAGCCCAGT 36640510 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || ||||||||| ||||| || || || || || || || Sbjct 36640511 GACACCATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 36640570 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || |||||||| ||| | | | ||||||| || ||| Sbjct 36640571 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCAGACTACAAC 36640630 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || | ||| |||| Sbjct 36640631 ATCCAGAAGGAGTCCACCTTGCACCTGGT 36640659 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || || || || || ||| Sbjct 36640679 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTCGAGCCCAGT 36640738 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || ||||||||| ||||| || || || || || || || Sbjct 36640739 GACACCATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 36640798 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || |||||||| ||| | | | ||||||| || ||| Sbjct 36640799 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCAGACTACAAC 36640858 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || | ||| |||| Sbjct 36640859 ATCCAGAAGGAGTCCACCTTGCACCTGGT 36640887 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || || || || || ||| Sbjct 36641591 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTCGAGCCCAGT 36641650 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || ||||||||| ||||| || || || || || || || Sbjct 36641651 GACACCATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 36641710 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || |||||||| ||| | | | ||||||| || ||| Sbjct 36641711 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCAGACTACAAC 36641770 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || | ||| |||| Sbjct 36641771 ATCCAGAAGGAGTCCACCTTGCACCTGGT 36641799 >seq55 Length=177699992 Score = 113 bits (124), Expect = 4e-20 Identities = 149/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 ||| ||||||| ||| | || | || | || || || || | |||||| || ||| || Sbjct 38854062 ACGTTGCAGATTTTTGTGAAGGCCCTTCCAGGGAAGACCATCATGCTCGAGGTTGAACCC 38854003 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| ||||| ||||| |||||||| || || |||||||| ||||| ||| Sbjct 38854002 TCGGACACTATAGAAGATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 38853943 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || ||| | ||||||||||| || || |||| || ||| | | ||||||| || Sbjct 38853942 CAGCAAAGGTTGATCTTTGCTGGTAAGCAGCCAGAAGATGGCCGTA--TTGTCAGACTAC 38853885 Query 24881 AACATTCAAAAGGAATCGACACTACA 24906 |||||||||||||| || || || || Sbjct 38853884 AACATTCAAAAGGAGTCCACTCTCCA 38853859 >seq301 Length=56205956 Score = 107 bits (118), Expect = 2e-18 Identities = 148/206 (72%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 ||||||||||| ||| || || || || || || ||||| |||||||| || ||| || Sbjct 23716374 ACGATGCAGATTTTTGAGAAGACCCTTACAGGAAAGACTATCACGCTCGAGGTTGAACCC 23716433 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| |||||| ||||| |||||||| || || |||||||| ||||| ||| Sbjct 23716434 TCGGACACTATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 23716493 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 | || | |||||||| || || || || || || ||| | | |||| || | Sbjct 23716494 CTGCAGAGGTTGATCTTGGCTGGTAAGCAACTAGAAGATGGCCGTACTTTGTCTGACTGC 23716553 Query 24881 AACATTCAAAAGGAATCGACACTACA 24906 |||| ||||||||| || || || || Sbjct 23716554 AACA-TCAAAAGGAGTCCACTCTCCA 23716578 >seq286 Length=88201929 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 ||||||||||| ||| | || || || | || || || || | |||||| || ||| || Sbjct 25394818 ACGATGCAGATTTTTGTGAAGACCCTTATAGGGAAGACCATCATGCTCGAGGTTGAACCC 25394759 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| |||||| ||||| ||||||| || | ||||||| ||||| ||| Sbjct 25394758 TCGGACACTATAGAAAATGTAAAGGCCCAGATCCAGGATGAGGAAGGAACTCCTCCTGAT 25394699 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || ||| | |||| || || || || |||||||| | | | | |||| || || Sbjct 25394698 CAGCAAAGGTTGACATTCGCTGGTAAGCAGCTGGAAGGTGGCCGTACTTTGTCTGACTAC 25394639 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 ||| |||||||||| || || || || | ||| || || | || || |||| Sbjct 25394638 AACGTTCAAAAGGAGTCCACTCTCCATCTCGTGCTGAGACTTCGTGGTGGCG 25394587 Score = 96.9 bits (106), Expect = 3e-15 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 ||||||||||| ||| | || || || | || || || || | |||||| | || || Sbjct 40050802 ACGATGCAGATTTTTGTGAAGACCCTTATGGGGAAGACCATCATGCTCGAGATTGAGCCC 40050861 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| |||||| |||||| |||||||| | | |||||||| ||||| ||| Sbjct 40050862 TCGGACACTATAGAAAATGTAAAAGCCAAGATCCAGAATGAGGAAGGAATTCCTCCTGAT 40050921 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAAC-ATGTCAGATTA 24879 || || | ||| |||| || || |||||||| || | | | || |||| ||||| Sbjct 40050922 CAGCAGAGGTTGGACTTTTATGGTAAGCAGCTGGAAGA-TGGCCATACTTTGTCTGATTA 40050980 Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 | |||||||||||| || || || || | ||| || || Sbjct 40050981 CAGCATTCAAAAGGAGTCCACGCTCCATCTCGTGCTGAGA 40051020 >seq31 Length=266435125 Score = 91.5 bits (100), Expect = 1e-13 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | || || || || || || || || |||||| | | ||| || Sbjct 11072265 GATGCAGATTTTTGTGAAGACCCTTACGGGGAAGACCATCACGCTCAAGTTTGAAACCCT 11072206 Query 24763 CG-ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 || |||| |||||| ||||| |||||||| || || ||||||| |||||||||| Sbjct 11072205 CGGACACTATAGAAAATGTAAAGACCAAGATCCAGGATAAGGAAGGAACTCCTCCCGATC 11072146 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAAC-ATGTCAGATTAT 24880 | || | || |||||||| || || ||||| || | | | | || |||| || Sbjct 11072145 AGCAGAGGTTAATCTTTGCTGGTAAGCAGCTAGAAAAATGGCCATACTTTGTCTTGCTAC 11072086 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 ||| |||||||| | || || || || | ||||| || Sbjct 11072085 AACTTTCAAAAGAAGTCTACCCTTCATCTTATGTTGAGA 11072047 >seq174 Length=112626471 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || || || || || ||| Sbjct 48881286 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTAGAGGTGGAGCCCAGT 48881345 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || ||||| || || || || || || Sbjct 48881346 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAGGGCATCCCCCCTGACCAG 48881405 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | ||||||||||| || |||||||| ||| | | | | || || || ||| Sbjct 48881406 CAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTACAAC 48881465 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || || ||| |||| Sbjct 48881466 ATCCAGAAGGAGTCAACCCTGCACCTGGT 48881494 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || || || || || ||| Sbjct 48881514 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 48881573 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || ||||| || || || || || || Sbjct 48881574 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAGGGCATCCCCCCTGACCAG 48881633 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | ||||||||||| || |||||||| ||| | | | | || ||||| ||| Sbjct 48881634 CAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGATTACAAC 48881693 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || || || || || || ||| |||| Sbjct 48881694 ATCCAGAAAGAGTCAACCCTGCACCTGGT 48881722 >seq297 Length=62275575 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 |||||| |||| ||| | | || || || || || || || |||||| || | ||| || Sbjct 34616795 ACGATGAAGATTTTTGTGACGACCCTTACAGGGAAGACCATCACGCTCCAATTTGAACCC 34616854 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | | ||| ||||| || || |||||||| || || |||||||| ||||| || Sbjct 34616855 TCAGGCACTACAGAAAATGTCAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAG 34616914 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 | || | ||| ||||||| || | |||| ||| ||| | | |||| || || Sbjct 34616915 GAGCAGAGGTTGGTCTTTGCTGGTGAGCAGCGGGAAGATGGCTGTACTTTGTCTGACTAC 34616974 Query 24881 AACATTCAAAAGGA 24894 |||||||||||||| Sbjct 34616975 AACATTCAAAAGGA 34616988 >seq166 Length=122095297 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 ||||||||||| ||| | || | || || || || || || | ||||| || ||| || Sbjct 98975569 ACGATGCAGATTTTTGTGAAGAGCCTTACAGGGAAGACCATCAGACTCGAGGTTGAACCC 98975510 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| |||||| ||||| |||||||| || | ||||||| || || ||| Sbjct 98975509 TCGGACACTATAGAAAATGTAAAGGCGAAGATCCAGGATAGGGAAGGAACTCCCCCTGAT 98975450 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || | ||||||| || || ||| |||| ||| | | |||| || || Sbjct 98975449 CAGCA----GAGGTCTTTGCTGGTAAGCAGTTGGAAGATGGCCGTACTTTGTCTGACTAC 98975394 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 ||| |||||||||| || || || || | ||| || || Sbjct 98975393 AACGTTCAAAAGGAGTCCACCCTCCATCTCGTGCTGAGA 98975355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449892229347400