Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rattus_20norvegicus_20[refseq_20GCF_5F000001895.5_202014-07-01] 955 sequences; 2,870,184,193 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq174 197 2e-44 seq271 188 1e-41 seq31 183 5e-40 seq258 98.7 2e-14 seq297 93.3 7e-13 >seq174 Length=112626471 Score = 197 bits (218), Expect = 2e-44 Identities = 190/244 (78%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| || || || ||||| ||| ||||||| || || ||| Sbjct 45290137 TGTACTTGGTGACTGCCTTGGTGCCTTCCGACACGGCATGCTTGGCCAGCTCCCCAGGCA 45290078 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||| | |||||||| ||| || ||||||||| Sbjct 45290077 GCAGCAGGCGCACGGCCGTCTGCACCTCGCGGGACGTGATGGTCGAGCGCTTGTTGTAAT 45290018 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| ||||||| || ||||||| |||| ||||||||||| |||||||||| Sbjct 45290017 GAGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 45289958 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| ||| |||||||||||||| |||||||||| Sbjct 45289957 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGCACCTGCTTCAGCACCTTGT 45289898 Query 1485710 AAAC 1485713 | || Sbjct 45289897 ACAC 45289894 Score = 197 bits (218), Expect = 2e-44 Identities = 190/244 (78%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| || || || ||||| ||| ||||||| || || ||| Sbjct 45296935 TGTACTTGGTGACTGCCTTGGTGCCTTCCGACACGGCATGCTTGGCCAGCTCCCCAGGCA 45296994 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||| | |||||||| ||| || ||||||||| Sbjct 45296995 GCAGCAGGCGCACGGCCGTCTGCACCTCGCGGGACGTGATGGTCGAGCGCTTGTTGTAAT 45297054 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| ||||||| || ||||||| |||| ||||||||||| |||||||||| Sbjct 45297055 GAGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 45297114 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| ||| |||||||||||||| |||||||||| Sbjct 45297115 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGCACCTGCTTCAGCACCTTGT 45297174 Query 1485710 AAAC 1485713 | || Sbjct 45297175 ACAC 45297178 >seq271 Length=90843779 Score = 188 bits (208), Expect = 1e-41 Identities = 188/244 (77%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || ||||||||| |||||| ||| ||| ||| Sbjct 43688858 TGTACTTGGTGACCGCCTTGGTGCCCTCGGAAACGGCGTGCTTGGCCAATTCACCGGGCA 43688917 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||||||| |||| ||| || ||||||||| Sbjct 43688918 GTAGCAGGCGCACGGCTGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAAT 43688977 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| ||| |||||| ||||||| |||| |||||||| || |||||||||| Sbjct 43688978 GCGCCAAGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTTCA 43689037 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| ||| |||||||| ||||| |||||||||| Sbjct 43689038 TGATGCCCATGGCCTTGGAAGAGATGCCTGTGTCCGGGTGCACTTGCTTCAGCACCTTGT 43689097 Query 1485710 AAAC 1485713 | || Sbjct 43689098 ACAC 43689101 Score = 183 bits (202), Expect = 5e-40 Identities = 187/244 (77%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| || || || || |||||| ||||||| || || ||| Sbjct 43628296 TGTACTTGGTGACCGCCTTGGTGCCTTCCGACACCGCGTGCTTGGCCAGCTCCCCCGGCA 43628237 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||||||||||||||| |||| ||| || ||||||||| Sbjct 43628236 GCAGCAGGCGCACGGCGGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAAT 43628177 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| |||||||| || |||||||||| Sbjct 43628176 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTTCA 43628117 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| ||| |||||||| ||||| |||||||||| Sbjct 43628116 TGATGCCCATGGCCTTGGAAGAGATGCCGGTGTCCGGGTGCACTTGCTTCAGCACCTTGT 43628057 Query 1485710 AAAC 1485713 | || Sbjct 43628056 ACAC 43628053 Score = 183 bits (202), Expect = 5e-40 Identities = 187/244 (77%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || || |||||| ||||||| || ||| | | Sbjct 44519874 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACCGCGTGCTTGGCCAGCTCCCCGGGAA 44519933 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||||||| || ||||||| ||| |||| ||| || ||||||||| Sbjct 44519934 GCAGCAGGCGCACAGCCGTCTGGACCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAAT 44519993 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| |||||||| || |||||||||| Sbjct 44519994 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTTCA 44520053 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| ||| |||||||| ||||| |||||||||| Sbjct 44520054 TGATGCCCATGGCCTTGGAAGAGATGCCCGTGTCCGGGTGCACTTGCTTAAGCACCTTGT 44520113 Query 1485710 AAAC 1485713 | || Sbjct 44520114 ACAC 44520117 Score = 181 bits (200), Expect = 2e-39 Identities = 189/246 (77%), Gaps = 4/246 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || || |||||| ||||||| || ||| ||| Sbjct 44793470 TGTACTTGGTGACCGCCTTGGTGCCCTCGGACACAGCGTGCTTGGCCAGCTCCCCGGGCA 44793529 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 | |||||||||||| ||||||||||| |||| ||| || |||||||| || | Sbjct 44793530 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAAT 44793589 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 |||| | ||| | |||||| ||||||| |||| |||||||| || |||||||| Sbjct 44793590 GCGCTAGACGCGAC--GCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTT 44793647 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||| | || ||||||||| ||| |||||||| ||||| |||||||| Sbjct 44793648 CATGATGCCCATGGCCTTAGAAGAGATGCCCGTGTCCGGGTGCACTTGCTTCAGCACCTT 44793707 Query 1485708 GTAAAC 1485713 ||| || Sbjct 44793708 GTACAC 44793713 Score = 179 bits (198), Expect = 6e-39 Identities = 186/244 (76%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| ||||||||||||||||| ||||| || || |||||| ||||||| || || | | Sbjct 44527435 TGTATTTGGTGACGGCCTTGGTGCCCTCGGACACCGCGTGCTTGGCCAGCTCCCCAGGAA 44527494 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||||||| |||| ||| || ||||||||| | Sbjct 44527495 GCAACAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 44527554 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| || | |||||||| || |||||||||| Sbjct 44527555 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCAAAGATGTCGTTCACGAACGAGTTCA 44527614 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| ||| ||||| || ||||| |||||||||| Sbjct 44527615 TGATGCCCATGGCCTTGGAAGAGATGCCCGTGTCCGGGTGTACTTGCTTCAGCACCTTGT 44527674 Query 1485710 AAAC 1485713 | || Sbjct 44527675 ACAC 44527678 Score = 179 bits (198), Expect = 6e-39 Identities = 186/244 (76%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || || |||||| |||||| || ||| | | Sbjct 44737964 TGTACTTGGTGACCGCCTTGGTGCCCTCGGACACCGCGTGCTTGGCCAACTCCCCGGGAA 44738023 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||||||| |||| ||| || ||||||||| Sbjct 44738024 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAAT 44738083 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| |||||||| || |||||||||| Sbjct 44738084 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTTCA 44738143 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| ||| ||||| || ||||| |||||||||| Sbjct 44738144 TGATGCCCATGGCCTTGGAAGAGATGCCCGTGTCCGGGTGTACTTGCTTCAGCACCTTGT 44738203 Query 1485710 AAAC 1485713 | || Sbjct 44738204 ACAC 44738207 Score = 179 bits (198), Expect = 6e-39 Identities = 186/244 (76%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || || |||||| ||||||| || ||| ||| Sbjct 44757804 TGTACTTGGTGACCGCCTTGGTGCCCTCGGACACAGCGTGCTTGGCCAGCTCCCCGGGCA 44757863 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||||||| |||| ||| || ||||||||| Sbjct 44757864 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAAT 44757923 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| |||||||| || |||||||||| Sbjct 44757924 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTTCA 44757983 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 | || ||| | ||| |||||||| ||| |||||||| ||||| || ||||||| Sbjct 44757984 TTATGCCCATGGCCTTGGAAGAGATGCCGGTGTCCGGGTGCACTTGCTTCAGTACCTTGT 44758043 Query 1485710 AAAC 1485713 | || Sbjct 44758044 ACAC 44758047 Score = 179 bits (198), Expect = 6e-39 Identities = 186/244 (76%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || ||||||||| ||||||| || || ||| Sbjct 44833939 TGTACTTGGTGACCGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCCGGCA 44833998 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| ||||| || ||||||||||| |||| ||| ||| ||||||||| Sbjct 44833999 GCAACAGACGCACCGCCGTCTGGATCTCCCGGGACGTGATAGTGGAGCGCTTGTTGTAAT 44834058 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||||||| |||||| ||||||| |||| |||||||| || |||||||||| Sbjct 44834059 GAGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTTCA 44834118 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| ||| |||||||| ||||| |||||||||| Sbjct 44834119 TGATGCCCATGGCCTTGGAAGAGATGCCGGTGTCCGGGTGCACTTGCTTCAGCACCTTGT 44834178 Query 1485710 AAAC 1485713 | || Sbjct 44834179 ACAC 44834182 Score = 174 bits (192), Expect = 2e-37 Identities = 185/244 (76%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || || |||||| ||||||| || ||| ||| Sbjct 43809039 TGTACTTGGTGACCGCCTTGGTGCCCTCGGACACCGCGTGCTTGGCCAGCTCCCCGGGCA 43808980 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||||||| |||| ||| || ||||||||| Sbjct 43808979 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAAT 43808920 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| ||||| ||||||| |||| |||||||| || |||||||||| Sbjct 43808919 GCGCCAGGCGCGACGCCTCTCCCGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTTCA 43808860 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||| || || |||||||| ||||| |||||||||| Sbjct 43808859 TGATGCCCATGGCCTTGGAAGAGATTCCGGTATCCGGGTGCACTTGCTTCAGCACCTTGT 43808800 Query 1485710 AAAC 1485713 | || Sbjct 43808799 ACAC 43808796 Score = 163 bits (180), Expect = 4e-34 Identities = 182/243 (75%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || || |||||| ||||||| || ||| ||| Sbjct 43423521 TGTACTTGGTGACCGCCTTGGTGCCCTCGGACACAGCGTGCTTGGCCAGCTCCCCGGGCA 43423462 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||| || || ||||||||||| |||| ||| || ||||||||| Sbjct 43423461 GCAGCAGGCGGACAGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAAT 43423402 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| ||||| | || || ||||||| Sbjct 43423401 GCGCCAGGCGCGATGCCTCGCCCGCGATGCGCTCGAAGATGTCTGTCACGAAGGAGTTCA 43423342 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| ||| |||||||| ||||| |||||||| | Sbjct 43423341 TGATGCTCATGGCCTTGGAAGAGATGCCGGTGTCCGGGTGCACTTGCTTCAGCACCTTAT 43423282 Query 1485710 AAA 1485712 ||| Sbjct 43423281 AAA 43423279 Score = 161 bits (178), Expect = 2e-33 Identities = 182/244 (75%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || || |||||| |||||| || ||| | | Sbjct 44748848 TGTACTTGGTGACCGCCTTGGTGCCCTCGGACACAGCGTGCTTGGCCAACTCCCCGGGAA 44748789 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| ||||| || ||||||||||| |||| ||| || ||||||||| Sbjct 44748788 GCAACAGACGCACCGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAAT 44748729 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||||||| |||||| ||||||| |||| |||||||| || |||||||||| Sbjct 44748728 GAGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTTCA 44748669 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 | || ||| | ||| ||||||||| ||| || ||||| ||||| |||||||||| Sbjct 44748668 TTATGCCCATGGCCTTGGAAGAGATGCCCGTGTCCGGATGCACTTGCTTAAGCACCTTGT 44748609 Query 1485710 AAAC 1485713 | || Sbjct 44748608 ACAC 44748605 Score = 143 bits (158), Expect = 4e-28 Identities = 179/239 (75%), Gaps = 5/239 (2%) Strand=Plus/Plus Query 1485475 TTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCT-GGCCAGTTCGCCGCGCATGAT 1485533 ||||||||||||||||| ||||| | || ||||| || |||||| || ||| ||| | Sbjct 43778615 TTGGTGACGGCCTTGGTGCCCTCGGC-ACCGCGTGGCTTGGCCAGCTCCCCGGGCAGCAG 43778673 Query 1485534 -CAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCG 1485592 |||||||||||| ||||||||||| |||| ||| || ||||||||| ||| Sbjct 43778674 GCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAATGCG 43778733 Query 1485593 CCAGGCGGCCGGCCTCGGTGCCGAT-GCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 |||| || | ||||||| |||| ||| |||| |||||||| || || ||||||||| Sbjct 43778734 CCAGACG-CGGGCCTCGCCCGCGATTGCGTTCGAAGATGTCGTTCACGAATGAGTTCATG 43778792 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710 || ||| | ||| ||||| || ||| |||||||| ||||| || |||||||| Sbjct 43778793 ATGCCCATGGCCTTGGAAGAGATACCGGTGTCCGGGTGCACTTGCTTCAGAACCTTGTA 43778851 Score = 143 bits (158), Expect = 4e-28 Identities = 179/243 (74%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 |||||||||||||||||||| ||||| || || || ||| ||||||| || ||| | | Sbjct 44842051 TACTTGGTGACGGCCTTGGTGCCCTCGGACACCGCCTGCTTGGCCAGCTCCCCGAGTAGT 44841992 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591 | |||||||||||| ||||||| ||| |||| ||| || ||||||||| | Sbjct 44841991 AGCAGGCGCACGGCCGTCTGGACCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAATGA 44841932 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT- 1485650 | |||||| |||||| ||||| | |||| |||||||| || ||||||||||| Sbjct 44841931 GGCAGGCGCGACGCCTCGCCCGCGATG-GCTCGAAGATGTCGTTCACGAACGAGTTCATA 44841873 Query 1485651 GATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710 || ||| | || |||||||| ||| |||||||| ||||| ||||||||||| Sbjct 44841872 AATGCCCATGGCCTTAGAAGAGATGCCAGTGTCCGGGTGCACTTGCTTAAGCACCTTGTA 44841813 Query 1485711 AAC 1485713 || Sbjct 44841812 CAC 44841810 Score = 125 bits (138), Expect = 1e-22 Identities = 169/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 1485486 CTTGGTACCC-TCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGG 1485544 |||||| ||| || || || |||||| ||||||| || ||| ||| | ||||||||||| Sbjct 43817727 CTTGGTGCCCCTCGGACACCGCGTGCTTGGCCAGCTCCCCG-GCAGCAGCAGGCGCACGG 43817669 Query 1485545 CGGTCTGGATCTCGCGGGTGCCGATCGTGTT-GCGCTTGTTAGTGCGCGCCAGGCGGCCG 1485603 | ||||||||| | |||| ||| || ||||||||| |||||||||| Sbjct 43817668 CCGTCTGGATCCC-CGGGACGTGATGGTCCGAGCGCTTGTTGTAATGCGCCAGGCGCGAC 43817610 Query 1485604 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGAT 1485663 ||||| ||||||| |||| |||||||| || |||||||||||||| ||| | Sbjct 43817609 GCCTCTCCCGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTTCATGATGCCCATGGCC 43817550 Query 1485664 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAAC 1485713 ||| ||||| || || |||||||| ||||| ||||||||||| || Sbjct 43817549 TTGGAAGAGATTCCGGTATCCGGGTGCACTTGCTTCAGCACCTTGTACAC 43817500 Score = 111 bits (122), Expect = 2e-18 Identities = 180/248 (73%), Gaps = 11/248 (4%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGAC-GGCGTGCCTGGCCAGTTCGCCGCGC 1485528 |||||||| |||| |||||||| ||||| || || ||||||| ||||||| || ||| || Sbjct 43765042 TGTACTTG-TGACCGCCTTGGTGCCCTCGGACACCGGCGTGCTTGGCCAGCTCCCCGGGC 43764984 Query 1485529 ATG-ATCAGGCGC-ACGGCGG---TCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT 1485583 | ||||| | ||||| | |||||||||| |||| ||| || || ||| Sbjct 43764983 CCACAGCAGGCCCCACGGCCGCCCTCTGGATCTC-CGGGACGTGATGGTCGAGCCTGTGT 43764925 Query 1485584 TAGTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGT-TGACAAAC 1485642 | |||||||||| |||||| || |||||| |||| ||||| | | || ||| Sbjct 43764924 TGTAATGCGCCAGGCGCGACGCCTCGCCGC-GATGCGTTCGAAGATGTCTTGTCACGAAC 43764866 Query 1485643 GAGTTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGC 1485702 ||||||||||| | ||| | ||| ||||||| || |||||||| ||||| ||| Sbjct 43764865 GAGTTCATGAT-GCCATGGCCTTGGAAAAGATGCCGGTATCCGGGTGCACTTGCTTCAGC 43764807 Query 1485703 ACCTTGTA 1485710 |||||||| Sbjct 43764806 ACCTTGTA 43764799 Score = 93.3 bits (102), Expect = 7e-13 Identities = 77/93 (83%), Gaps = 1/93 (1%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || || |||||| ||||||| || || ||| Sbjct 43778390 TGTACTTGGTGACCGCCTTGGTGCCCTCGGACACCGCGTGCTTGGCCAGCTCCTCGGGCA 43778331 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 | |||||||||||| ||||||| ||| |||| Sbjct 43778330 GCAGCAGGCGCACGGCCGTCTGGACCTC-CGGG 43778299 >seq31 Length=266435125 Score = 183 bits (202), Expect = 5e-40 Identities = 194/256 (76%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || || |||||| | |||||||| ||| ||| Sbjct 198361364 TGTACTTGGTGACCGCCTTGGTGCCCTCCGACACAGCGTGCTTAGCCAGTTCTCCGGGCA 198361305 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || ||||| || ||||||||||| || | ||| || |||||||| Sbjct 198361304 GTAGGAGACGCACCGCCGTCTGGATCTCCCGCGATGTGATTGTAGACCGCTTGTTGTAAT 198361245 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| | ||||||| |||| ||||| |||||||||||||||| Sbjct 198361244 GCGCCAGGCGAGAAGCCTCGTTTGCGATGCGCTCGAAGATGTCATTGACAAACGAGTTCA 198361185 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| ||| || ||||||||||| |||||||||| Sbjct 198361184 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCCGGATGCACCTGCTTCAGCACCTTGT 198361125 Query 1485710 AAACAAAGGACGAGTA 1485725 | ||| || ||||| Sbjct 198361124 ACACATAGATGGAGTA 198361109 Score = 138 bits (152), Expect = 2e-26 Identities = 177/244 (73%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || |||||||| ||||| || || || || | |||| || ||| | | Sbjct 198419057 TGTACTTGGTCACAGCCTTGGTGCCCTCCGACACAGCATGTTTAGCCAACTCCCCGGGAA 198418998 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| |||||||| ||||| ||||| |||| ||| || ||||||||| Sbjct 198418997 GCAGCAGACGCACGGCCGTCTGTATCTCCCGGGAAGTGATGGTCGAGCGCTTGTTGTAAT 198418938 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||||||| ||| |||||| ||||||| |||| |||||||| || || || |||| Sbjct 198418937 GCGCCAGACGGGAGGCCTCACCTGCGATGCGCTCGAAGATGTCGTTCACGAAGGAATTCA 198418878 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | || |||||||| ||| |||||||| ||||| |||||||||| Sbjct 198418877 TGATACCCATGGCCTTAGATGAGATGCCGGTGTCCGGGTGCACTTGCTTCAGCACCTTGT 198418818 Query 1485710 AAAC 1485713 | || Sbjct 198418817 ACAC 198418814 >seq258 Length=90668790 Score = 98.7 bits (108), Expect = 2e-14 Identities = 166/239 (69%), Gaps = 1/239 (0%) Strand=Plus/Minus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCG-CATG 1485531 |||||||||| |||||||| ||||| | || || ||| ||||||| || | | | || Sbjct 59524492 ACTTGGTGACAGCCTTGGTGCCCTCGGGCACAGCATGCTTGGCCAGCTCCCGGGGGCAGC 59524433 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591 | ||||| || ||| | ||||||||| | || ||| || ||||||||| || Sbjct 59524432 AGCAGGCACATGGCTGCCTGGATCTCCCAGGACGTGATGGTTAAGCGCTTGTTGTAATGC 59524373 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 |||||||| || | | |||| |||| | ||||| || |||||||||||| Sbjct 59524372 GCCAGGCGTAACAGCTTGCCCACAATGCATTCGAAGGTATCGTTTACGAACGAGTTCATG 59524313 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710 || ||| | ||| ||||||||| || ||||||| ||| | |||||| |||| Sbjct 59524312 ATGCCCATGGCCTTGGAAGAGATGCCCGAGTTCAGGTGCACTTGCGTCAGCACCCTGTA 59524254 >seq297 Length=62275575 Score = 93.3 bits (102), Expect = 7e-13 Identities = 188/277 (68%), Gaps = 4/277 (1%) Strand=Plus/Minus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200 ||||| | |||||| | ||||| || || | | || || | ||| ||||||| Sbjct 25392235 AAACAGCGGGCCTCTGTGACTTGAACTTCTTGGCTAAATCGCTCCACCAAGTTCTCATTG 25392176 Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTC- 796259 || ||||| || || || || || ||||| || || || ||||| || | ||| || Sbjct 25392175 ACTATGCCATCACTCGCCGCAAAGAAGGCCAGAACATGAGATATAAAATGTCTCTCATCT 25392116 Query 796260 -GTCGCTGAGCGAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCC 796318 || | |||| ||||||| | || | ||||| ||||||||||| |||| Sbjct 25392115 GGTTTCAGAGCTT--CCCAGTGCTGAATATCCTTGGAAAGGTCCACCTCCTCGGCAGTCC 25392058 Query 796319 AAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378 ||||||||||||| || || |||||||||| ||| || ||||| |||||| || | Sbjct 25392057 AAAAGGAGGCCTCAGCTTTCTTGTACATCTGCCAGATATCATGGTATTCGATGGGAAAGA 25391998 Query 796379 GAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415 ||| || || ||| || || | || | |||||| Sbjct 25391997 CAACGAAACGGCGGGGATTTTCTCTCAGTAACGGCTC 25391961 Score = 89.7 bits (98), Expect = 8e-12 Identities = 200/298 (67%), Gaps = 17/298 (6%) Strand=Plus/Minus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAA----GATGGCACAGAAACTGCCCGA 794432 ||||| ||||| || || || ||||||||||| || |||| | |||| || || Sbjct 25392517 AGGCCCGGCATCAGTCCCCGTTTCTTGAGCCAGAATATTGATGCAAAAGAA----CCAGA 25392462 Query 794433 GAAAAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCC 794492 || ||||| || || || || || ||| | || | || || || | || || | Sbjct 25392461 AAAGAAGATTCCTTCTACCGCAGCGAAGGCCACAACTCGTTCTCCATACGT----AG--C 25392408 Query 794493 CTCTTTGTTG---ATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGT 794549 |||||||| ||||| || ||||| || ||||| ||| |||| | |||| || Sbjct 25392407 CTCTTTGTCCCCAATCCAACGCAAGGCCCAGTCAGCCTTCTTCTTCACACAAGGCATTGT 25392348 Query 794550 GTCGATGGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAG 794609 || |||||| ||||| | || | || | || || | ||| ||||| || || Sbjct 25392347 CTCAATGGCGTTGAAGAGATATTCTCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAG 25392288 Query 794610 GAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 ||| ||| | || ||||| ||||| || ||||| || ||||||||||| || ||| Sbjct 25392287 GAGACTGTACATTTCGGAGTGTATGTTCTCCATGGCAATTTGGAAGCCATAGAAACAG 25392230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916144812294245