Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rattus_20norvegicus_20[refseq_20GCF_5F000001895.5_202014-07-01] 955 sequences; 2,870,184,193 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq206 161 6e-35 seq174 132 3e-26 seq297 123 2e-23 seq97 116 2e-21 seq232 102 5e-17 seq80 96.9 2e-15 seq312 91.5 1e-13 >seq206 Length=52716770 Score = 161 bits (178), Expect = 6e-35 Identities = 164/214 (77%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||||||||| | |||| ||||||||| ||||| ||||| || ||| |||| |||| Sbjct 36641575 CAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATC 36641516 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| || || |||||||| | |||||||| | || | ||||||||||| Sbjct 36641515 TTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 36641456 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || ||| ||||| | | || | ||| ||| |||||| || | ||| ||||| Sbjct 36641455 CTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGT 36641396 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||| || || |||||||| ||||||||||||||| Sbjct 36641395 CTTGCCTGTCAGGGTCTTCACAAAGATCTGCATG 36641362 Score = 161 bits (178), Expect = 6e-35 Identities = 164/214 (77%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||||||||| | |||| ||||||||| ||||| ||||| || ||| |||| |||| Sbjct 36642031 CAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATC 36641972 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| || || |||||||| | |||||||| | || | ||||||||||| Sbjct 36641971 TTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 36641912 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || ||| ||||| | | || | ||| ||| |||||| || | ||| ||||| Sbjct 36641911 CTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGT 36641852 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||| || || |||||||| ||||||||||||||| Sbjct 36641851 CTTGCCTGTCAGGGTCTTCACAAAGATCTGCATG 36641818 Score = 161 bits (178), Expect = 6e-35 Identities = 164/214 (77%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||||||||| | |||| ||||||||| ||||| ||||| || ||| |||| |||| Sbjct 36642487 CAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATC 36642428 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| || || |||||||| | |||||||| | || | ||||||||||| Sbjct 36642427 TTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 36642368 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || ||| ||||| | | || | ||| ||| |||||| || | ||| ||||| Sbjct 36642367 CTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGT 36642308 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||| || || |||||||| ||||||||||||||| Sbjct 36642307 CTTGCCTGTCAGGGTCTTCACAAAGATCTGCATG 36642274 Score = 159 bits (176), Expect = 2e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | |||| ||||||||| ||||| ||||| || ||| |||| |||| Sbjct 36640662 AGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATCT 36640603 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || || |||||||| | |||||||| | || | ||||||||||| Sbjct 36640602 TCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 36640543 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| ||||| | | || | ||| ||| |||||| || | ||| |||||| Sbjct 36640542 TGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTC 36640483 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || |||||||| ||||||||||||||| Sbjct 36640482 TTGCCTGTCAGGGTCTTCACAAAGATCTGCATG 36640450 Score = 159 bits (176), Expect = 2e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | |||| ||||||||| ||||| ||||| || ||| |||| |||| Sbjct 36640890 AGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATCT 36640831 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || || |||||||| | |||||||| | || | ||||||||||| Sbjct 36640830 TCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 36640771 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| ||||| | | || | ||| ||| |||||| || | ||| |||||| Sbjct 36640770 TGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTC 36640711 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || |||||||| ||||||||||||||| Sbjct 36640710 TTGCCTGTCAGGGTCTTCACAAAGATCTGCATG 36640678 Score = 159 bits (176), Expect = 2e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | |||| ||||||||| ||||| ||||| || ||| |||| |||| Sbjct 36641346 AGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATCT 36641287 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || || |||||||| | |||||||| | || | ||||||||||| Sbjct 36641286 TCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 36641227 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| ||||| | | || | ||| ||| |||||| || | ||| |||||| Sbjct 36641226 TGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTC 36641167 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || |||||||| ||||||||||||||| Sbjct 36641166 TTGCCTGTCAGGGTCTTCACAAAGATCTGCATG 36641134 Score = 159 bits (176), Expect = 2e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | |||| ||||||||| ||||| ||||| || ||| |||| |||| Sbjct 36641802 AGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATCT 36641743 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || || |||||||| | |||||||| | || | ||||||||||| Sbjct 36641742 TCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 36641683 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| ||||| | | || | ||| ||| |||||| || | ||| |||||| Sbjct 36641682 TGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTC 36641623 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || |||||||| ||||||||||||||| Sbjct 36641622 TTGCCTGTCAGGGTCTTCACAAAGATCTGCATG 36641590 Score = 159 bits (176), Expect = 2e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | |||| ||||||||| ||||| ||||| || ||| |||| |||| Sbjct 36642258 AGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATCT 36642199 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || || |||||||| | |||||||| | || | ||||||||||| Sbjct 36642198 TCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 36642139 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| ||||| | | || | ||| ||| |||||| || | ||| |||||| Sbjct 36642138 TGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTC 36642079 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || |||||||| ||||||||||||||| Sbjct 36642078 TTGCCTGTCAGGGTCTTCACAAAGATCTGCATG 36642046 Score = 154 bits (170), Expect = 1e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | |||| ||||||||| ||||| || || || ||| |||| |||| Sbjct 36641118 AGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCTGACAGGGTGCGGCCATCT 36641059 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || || |||||||| | |||||||| | || | ||||||||||| Sbjct 36641058 TCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 36640999 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| ||||| | | || | ||| ||| |||||| || | ||| |||||| Sbjct 36640998 TGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTC 36640939 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || |||||||| ||||||||||||||| Sbjct 36640938 TTGCCTGTCAGGGTCTTCACAAAGATCTGCATG 36640906 Score = 149 bits (164), Expect = 4e-31 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | |||| ||||||||| ||||| ||||| || ||| |||| |||| Sbjct 36640434 AGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATCT 36640375 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || || |||||||| | |||||||| | || | ||||||||||| Sbjct 36640374 TCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 36640315 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| ||||| | | || | ||| ||| |||||| || | ||| |||||| Sbjct 36640314 TGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTC 36640255 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | ||| || |||||||||||||| Sbjct 36640254 TTACCAGTTAAGGTTTTCACAAAGATCTGCAT 36640223 >seq174 Length=112626471 Score = 132 bits (146), Expect = 3e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||||||||||| | ||| ||||||||| ||||| ||||| || Sbjct 48881512 CCGCCCCTCAGGCGGAGGACCAGGTGCAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAG 48881453 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| ||||| ||||| ||||| ||||| || | |||||||| | || Sbjct 48881452 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 48881393 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||| || || | || || || ||| | || | ||| ||| ||| || Sbjct 48881392 ATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACC 48881333 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | ||| |||||||| || || |||||||| || |||||||||||| Sbjct 48881332 TCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATG 48881285 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||||||||||| | ||| ||| ||||| ||||| || || || Sbjct 48881740 CCACCCCTCAGGCGGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGAG 48881681 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| ||||| ||||| ||||| ||||| || | |||||||| | || Sbjct 48881680 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 48881621 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||| || || | || || || ||| | || | ||| ||| ||| || Sbjct 48881620 ATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACC 48881561 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | ||| |||||||| || || |||||||| || |||||||||||| Sbjct 48881560 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATG 48881513 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||||||||||| | ||| ||| ||||| ||||| || || || Sbjct 49699196 CCGCCCCTCAGGCGGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGAG 49699255 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| ||||| ||||| ||||| ||||| || | |||||||| | || Sbjct 49699256 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 49699315 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||| || || | || || || ||| | || | ||| ||| ||| || Sbjct 49699316 ATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACC 49699375 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| |||||||| || || |||||||| ||| ||| ||||| Sbjct 49699376 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAGAGAATTGCAT 49699422 >seq297 Length=62275575 Score = 123 bits (136), Expect = 2e-23 Identities = 161/217 (74%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 34765 CAGGACCAGGTG-AATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCAT 34823 ||| |||||||| || |||| ||| |||| |||| ||||| || ||| |||| ||| Sbjct 30819930 CAGCACCAGGTGCAAGGGTGGACTCTCTCTGGGTGTTGTAGTCGGACAGGGTGCGGCCAT 30819989 Query 34824 CGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGT 34883 | ||||| || || ||||| |||||||||| |||||||| | || || | ||| ||| Sbjct 30819990 CCTCCAGCTGTTTGCCGGCAAAGATCAGTCTCTGCTGGTCAGGGGG-ACGACTTCCATGT 30820048 Query 34884 CGTTTATTTTTTGTTTGACGGATGCTATCGAT--TCATTGGCCTCGACATCAACGGTTAT 34941 | | || || ||||| || || |||| ||| ||| |||||| |||| || || Sbjct 30820049 CCTGGATCTTGGCCTTGAC--ATTCT--CGATGGTCACTGGACTCGACCTCAAGAGTGAT 30820104 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||||| ||| | |||||||| || |||||||||||| Sbjct 30820105 GGTCTTGCCCATCAGGGTCTTCACGAAGATCTGCATG 30820141 >seq97 Length=173707219 Score = 116 bits (128), Expect = 2e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||||||||||| | ||| ||| ||||| ||||| || || || Sbjct 138042956 CCACCCCTCAGGCGGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGAG 138042897 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| ||||| ||||| ||||| ||||| || | |||||||| | || Sbjct 138042896 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 138042837 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||| || || | || || || ||| | || | ||| ||| ||| || Sbjct 138042836 ATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACC 138042777 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| |||||||| || || |||||||| || ||||| ||||| Sbjct 138042776 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCAT 138042730 >seq232 Length=115493446 Score = 102 bits (112), Expect = 5e-17 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | ||| ||||| ||| ||| | || || || ||| |||| |||| Sbjct 36866021 AGGACCAGGTGCAGGGTTGACTCCTCCTGGATGCTGTAATCAGAGAGGGTGCGGCCATCT 36865962 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| ||||| || || || | |||||||| | || | | |||||| || Sbjct 36865961 TCCAGCTGCTTGCCGGCAAAAATGAGCCTCTGCTGGTCAGGGGGGATGCTCTCCTTATCC 36865902 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || || || || || || | ||| ||| ||| || || | ||| |||| Sbjct 36865901 TGGATCTTGGCCTTCAC--ATTCTCGATGGTGTCACTGGGCTCCACCTCTAGGGTGATGG 36865844 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || || |||||||| || ||||| ||||| Sbjct 36865843 TCTTGCCGGTCAGGGTCTTCACGAAGATTTGCAT 36865810 >seq80 Length=184226339 Score = 96.9 bits (106), Expect = 2e-15 Identities = 139/195 (71%), Gaps = 1/195 (1%) Strand=Plus/Plus Query 34790 TTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATC 34849 ||||| |||| ||||| || ||| |||| |||| ||||| || || || |||| ||| Sbjct 171061644 TTCTGGATGTCGTAGTCTGACAGGGTGCGGCCATCCTCCAGCTGTTTGTCGTCGAATATC 171061703 Query 34850 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT 34909 || | || ||||| | || || || |||||||| | || || |||| || Sbjct 171061704 AGCCTCTGGTGGTCAGGGGG-ACGCCTTCCTTGTCTTGGATCTTGGCCTTGATATTGTCT 171061762 Query 34910 ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAG 34969 || | ||| ||| || ||| |||| || |||||||| || || |||||||| || ||| Sbjct 171061763 ATGGTGTCACTGGGCTTGACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAG 171061822 Query 34970 ATCTGCATGATAGTG 34984 ||||||||| | ||| Sbjct 171061823 ATCTGCATGTTGGTG 171061837 >seq312 Length=159970021 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/228 (69%), Gaps = 9/228 (4%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||||||||||| | ||| ||| ||||| ||||| || || || Sbjct 54028820 CCACCCCTCAGGCAGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGAG 54028879 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| || | |||| ||||| ||||| || || ||||| || | |||||||| | || Sbjct 54028880 AGGGTGTGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTC-AGGGGG 54028938 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTC 34926 | ||||| || || | || || || ||| | ||||| ||||||| ||| Sbjct 54028939 ATACCCTCTTTATCCTGGATCTTGGCATT----CATGTTCTCGATGGTGTCATTGGGCTC 54028994 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTG 34974 || || | ||| ||| |||| | || |||||||| | |||||||| Sbjct 54028995 CACCTCCAGGGTGATGATCTTGCTGGTCAGGGTCTTCAAGAAGATCTG 54029042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325689009241145