Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rattus_20norvegicus_20[refseq_20GCF_5F000001895.5_202014-07-01] 955 sequences; 2,870,184,193 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq206 152 1e-31 seq97 132 9e-26 seq301 123 5e-23 seq1 123 5e-23 seq55 114 3e-20 seq312 107 4e-18 seq31 100 6e-16 seq286 96.9 7e-15 seq271 93.3 8e-14 seq166 91.5 3e-13 seq154 91.5 3e-13 seq258 84.2 4e-11 seq129 84.2 4e-11 >seq206 Length=52716770 Score = 152 bits (168), Expect = 1e-31 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| | ||||| || | |||||| || || || ||||| || || || ||||| Sbjct 36641589 CCCCCTCTGAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 36641530 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| || || || || |||||||| || || || || || || || Sbjct 36641529 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36641470 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || ||||| || || |||||||| || ||||||||||| || ||| | || || || Sbjct 36641469 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36641410 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || ||||||||||||| ||||| ||||| |||||||| Sbjct 36641409 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36641363 Score = 152 bits (168), Expect = 1e-31 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| | ||||| || | |||||| || || || ||||| || || || ||||| Sbjct 36642045 CCCCCTCTGAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 36641986 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| || || || || |||||||| || || || || || || || Sbjct 36641985 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36641926 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || ||||| || || |||||||| || ||||||||||| || ||| | || || || Sbjct 36641925 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36641866 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || ||||||||||||| ||||| ||||| |||||||| Sbjct 36641865 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36641819 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| | || || || | |||||| || || || ||||| || || ||||| || Sbjct 36641133 CCCCCTCTGAGGCGAAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCTGAC 36641074 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| || || || || |||||||| || || || || || || || Sbjct 36641073 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36641014 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || ||||| || || |||||||| || ||||||||||| || ||| | || || || Sbjct 36641013 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36640954 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || ||||||||||||| ||||| ||||| |||||||| Sbjct 36640953 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36640907 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| | ||||| || | |||||| || || || ||||| || || || || || Sbjct 36642501 CCCCCTCTGAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAC 36642442 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| || || || || |||||||| || || || || || || || Sbjct 36642441 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36642382 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || ||||| || || |||||||| || ||||||||||| || ||| | || || || Sbjct 36642381 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36642322 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || ||||||||||||| ||||| ||||| |||||||| Sbjct 36642321 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36642275 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| | || || || | |||||| || || || ||||| || || || || || Sbjct 36641361 CCCCCTCTGAGGCGAAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAC 36641302 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| || || || || |||||||| || || || || || || || Sbjct 36641301 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36641242 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || ||||| || || |||||||| || ||||||||||| || ||| | || || || Sbjct 36641241 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36641182 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || ||||||||||||| ||||| ||||| |||||||| Sbjct 36641181 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36641135 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| | || || || | |||||| || || || ||||| || || || || || Sbjct 36642273 CCCCCTCTGAGGCGAAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAC 36642214 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| || || || || |||||||| || || || || || || || Sbjct 36642213 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36642154 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || ||||| || || |||||||| || ||||||||||| || ||| | || || || Sbjct 36642153 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36642094 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || ||||||||||||| ||||| ||||| |||||||| Sbjct 36642093 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36642047 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| | || || || | ||||| || || || ||||| || || || || || Sbjct 36640677 CCCCCTCTGAGGCGAAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGAC 36640618 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| || || || || |||||||| || || || || || || || Sbjct 36640617 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36640558 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || ||||| || || |||||||| || ||||||||||| || ||| | || || || Sbjct 36640557 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36640498 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || ||||||||||||| ||||| ||||| |||||||| Sbjct 36640497 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36640451 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| | || || || | ||||| || || || ||||| || || || || || Sbjct 36640905 CCCCCTCTGAGGCGAAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGAC 36640846 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| || || || || |||||||| || || || || || || || Sbjct 36640845 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36640786 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || ||||| || || |||||||| || ||||||||||| || ||| | || || || Sbjct 36640785 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36640726 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || ||||||||||||| ||||| ||||| |||||||| Sbjct 36640725 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36640679 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| | || || || | ||||| || || || ||||| || || || || || Sbjct 36641817 CCCCCTCTGAGGCGAAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGAC 36641758 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| || || || || |||||||| || || || || || || || Sbjct 36641757 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36641698 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || ||||| || || |||||||| || ||||||||||| || ||| | || || || Sbjct 36641697 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36641638 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || ||||||||||||| ||||| ||||| |||||||| Sbjct 36641637 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36641591 Score = 127 bits (140), Expect = 4e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| | || || || | ||||| || || || ||||| || || || || || Sbjct 36640449 CCCCCTCTGAGGCGAAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGAC 36640390 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| || || || || |||||||| || || || || || || || Sbjct 36640389 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36640330 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || ||||| || || |||||||| || ||||||||||| || ||| | || || || Sbjct 36640329 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36640270 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 |||| || || ||||| || || || || || ||||| ||||||||| Sbjct 36640269 TCCAGGGTGATGGTCTTACCAGTTAAGGTTTTCACAAAGATCTGCATT 36640222 >seq97 Length=173707219 Score = 132 bits (146), Expect = 9e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| || || || || || || || ||||| | | | | || ||||| | || Sbjct 138628782 TGGAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGGCCATCTTCCAACTGC 138628841 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||||||||| | || || ||||| ||||| |||||||||||||| || ||||| Sbjct 138628842 TTACCAGCAAAGATCAACCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTG 138628901 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || ||||||||||| || || || ||||| || || | || || ||||| ||||| Sbjct 138628902 GCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGTCTTCCCTGTA 138628961 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | ||||| ||||| |||||||| Sbjct 138628962 AGGGTCTTCACAAAAATCTGCAT 138628984 Score = 123 bits (136), Expect = 5e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| || || || || || || || ||||| | | | | || |||||||| || Sbjct 159895299 TGGAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGGCCATCTTCTAGCTGC 159895240 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||||||||| | || || ||||| ||||| ||||||||| ||| || ||||| Sbjct 159895239 TTACCAGCAAAGATCAACCTCTGCTGATCAGGAGGAGTTCCTTCCTCATCCTGGATCTTG 159895180 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || ||||||||||| || || || ||||| || | | || || ||||| ||| | Sbjct 159895179 GCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTTGAGCGTGATGGTCTTCCCTATA 159895120 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | ||||||||||| ||||||| Sbjct 159895119 AGGGTCTTTACAAAACTCTGCAT 159895097 Score = 84.2 bits (92), Expect = 4e-11 Identities = 114/158 (72%), Gaps = 1/158 (1%) Strand=Plus/Plus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 || ||||| | || || ||||||||||| | || || ||||| ||||| | |||||| Sbjct 49813701 CCATCTTCCATCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCAGGAGGAACGCCTTCC 49813760 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 | ||| || ||||| || ||||||||||| || || || ||||| || | | | || Sbjct 49813761 TCATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCT-CGAGCTT 49813819 Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| || | | |||||| ||||| || |||| Sbjct 49813820 ACGGTCTTCCCCATAAGCGTCTTCACAAAAGTCAGCAT 49813857 >seq301 Length=56205956 Score = 123 bits (136), Expect = 5e-23 Identities = 150/203 (74%), Gaps = 1/203 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| || || || || || || | ||||| | | | | || ||||||||||| Sbjct 23716578 TGGAGAGTGGACTCCTTTTG-ATGTTGCAGTCAGACAAAGTACGGCCATCTTCTAGTTGC 23716520 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||| ||||| | || || |||| ||||| |||||||||||||| || ||||| Sbjct 23716519 TTACCAGCCAAGATCAACCTCTGCAGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTG 23716460 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || ||||||||||| || || || ||||| || || | || || ||||| ||||| Sbjct 23716459 GCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATAGTCTTTCCTGTA 23716400 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | ||||| |||| |||||||| Sbjct 23716399 AGGGTCTTCTCAAAAATCTGCAT 23716377 >seq1 Length=282763074 Score = 123 bits (136), Expect = 5e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| || || || || || || || ||||| | | | | || |||| || || Sbjct 255573175 TGGAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGGCCACCTTCCAGCTGC 255573234 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || |||||||||| | || || ||||| ||||| || |||||||||| || ||||| Sbjct 255573235 TTACCAGCAAAGACCAACCTCTGCTGATCAGGAGGAGTTTCTTCCTTATCCTGGATCTTG 255573294 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || ||||||||||| || || || ||||| ||||| | || || ||||| ||||| Sbjct 255573295 GCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACTTCGAGCGTGATGGTCTTCCCTGTA 255573354 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | ||||| ||||| |||||||| Sbjct 255573355 AGGGTCTTCACAAAAATCTGCAT 255573377 Score = 84.2 bits (92), Expect = 4e-11 Identities = 99/134 (74%), Gaps = 4/134 (3%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || ||||| || || || || || || ||||| | | || ||||| || || Sbjct 154824807 TGAAGGGTAGACTCCTTTTGAATGTTGTAGTCAGAC----TACAGCCATCTTCCAGCTGC 154824752 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 | ||||||||||| | ||| || ||||| | || |||||||||||||| || ||||| Sbjct 154824751 TAACCAGCAAAGATCAATCTCTGCTGATCAGAGGGGATTCCTTCCTTATCCTGGATCTTG 154824692 Query 82728 GCTTTTACATTTTC 82741 || ||||||||||| Sbjct 154824691 GCCTTTACATTTTC 154824678 Score = 84.2 bits (92), Expect = 4e-11 Identities = 99/134 (74%), Gaps = 4/134 (3%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || ||||| || || || || || || ||||| | | || ||||| || || Sbjct 154914911 TGAAGGGTAGACTCCTTTTGAATGTTGTAGTCAGAC----TACAGCCATCTTCCAGCTGC 154914856 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 | ||||||||||| | ||| || ||||| | || |||||||||||||| || ||||| Sbjct 154914855 TAACCAGCAAAGATCAATCTCTGCTGATCAGAGGGGATTCCTTCCTTATCCTGGATCTTG 154914796 Query 82728 GCTTTTACATTTTC 82741 || ||||||||||| Sbjct 154914795 GCCTTTACATTTTC 154914782 >seq55 Length=177699992 Score = 114 bits (126), Expect = 3e-20 Identities = 155/215 (72%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 || ||| || | || ||||| || || || || || || || || || | || | || Sbjct 38853846 ACTCAGCACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCTGACA--ATACGGCC 38853903 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 |||||| | || || ||||||||||| | ||||| ||||| ||||| ||||||||||| Sbjct 38853904 ATCTTCTGGCTGCTTACCAGCAAAGATCAACCTTTGCTGATCAGGAGGAATTCCTTCCTT 38853963 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||| || ||||| || ||||||| ||| || || || ||||| || || | | || Sbjct 38853964 ATCCTGGATCTTGGCCTTTACATCTTCTATAGTGTCCGAGGGTTCAACCTCGAGCATGAT 38854023 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCA 82809 ||||| |||| | | ||| ||||| ||||||| Sbjct 38854024 GGTCTTCCCTGGAAGGGCCTTCACAAAAATCTGCA 38854058 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/91 (81%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAG--TCTTTGTTGATCTGGAGGTATTCCTT 82710 || ||| | || || || ||| |||||||||| ||| || ||||| | ||| ||||||| Sbjct 15464858 CCATCTCCCAGCTGCTTACCAACAAAGATTAGCCTCTCTGCTGATCAGAAGGAATTCCTT 15464917 Query 82711 CCTTATCTTGAATCTTTGCTTTTACATTTTC 82741 |||||||||| ||||| || ||||||||||| Sbjct 15464918 CCTTATCTTGGATCTTGGCCTTTACATTTTC 15464948 >seq312 Length=159970021 Score = 107 bits (118), Expect = 4e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 82617 GATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCA 82676 || || || || || || || ||||| | | | | || ||||| || || | |||||| Sbjct 72456646 GACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGGCCATCTTCCAGCTGCTCACCAGCA 72456705 Query 82677 AAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACA 82736 ||||| | || || | ||| ||||| |||||||||| ||| || ||||| || |||||| Sbjct 72456706 AAGATCAACCTCTGCTCATCAGGAGGAATTCCTTCCTCATCCTGGATCTTGGCCTTTACA 72456765 Query 82737 TTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTT 82796 ||||| || || || ||||| | || | || | ||||| ||||| | ||||| Sbjct 72456766 TTTTCTATAGTGTCTGAGGGTTCAGCCTCGAGCGTGAGGGTCTTCCCTGTAAGGGTCTTC 72456825 Query 82797 ACAAATATCTGCAT 82810 ||||| |||||||| Sbjct 72456826 ACAAAAATCTGCAT 72456839 Score = 98.7 bits (108), Expect = 2e-15 Identities = 148/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 82611 AGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTT 82670 ||||| || || || || || || | ||||| | | | | || |||| || || || Sbjct 104255413 AGAGTGGACTCCTTTTGAATGTTGCAGTCAGACAAAGTACGGCCACCTTCCAGCTGCTTA 104255354 Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTAT-CTTGAATCTTTGC 82729 |||||||||| | || || ||||| ||| | |||||||||||| || ||| ||| || Sbjct 104255353 CCAGCAAAGACCAAACTCTGCTGATCAGGAAGAGTTCCTTCCTTATTCTAGAA-CTTGGC 104255295 Query 82730 TTTTACATTTTCAATCGTATCATTAG-GTTCTACTTCCAAAGTTATCGTCTTGCCTGTCA 82788 ||||||||||| || || || | || |||| || | | || || ||||| ||||| | Sbjct 104255294 CTTTACATTTTCTATAGTGTC-TGAGAGTTCAACCCCAAGCGTGATGGTCTTCCCTGTAA 104255236 Query 82789 ACGTCTTTACAAATATCTGCATTAT 82813 | | ||| ||||| |||||||| || Sbjct 104255235 AGGCCTTCACAAAAATCTGCATAAT 104255211 Score = 93.3 bits (102), Expect = 8e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 82617 GATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCA 82676 || || || || || || || ||||| | | | | || |||||||| || || |||||| Sbjct 37026598 GACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGGCCATCTTCTAGCTGCTTACCAGCA 37026539 Query 82677 AAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACA 82736 |||| | || || ||||| ||||| |||||||||| ||| || ||||| || |||||| Sbjct 37026538 AAGACCAACCTCTGCTGATCAGGAGGAATTCCTTCCTCATCCTGGATCTTGGCCTTTACA 37026479 Query 82737 TTTTCAATCGTATC 82750 ||||| || || || Sbjct 37026478 TTTTCTATAGTGTC 37026465 >seq31 Length=266435125 Score = 100 bits (110), Expect = 6e-16 Identities = 117/157 (75%), Gaps = 1/157 (1%) Strand=Plus/Plus Query 82658 TTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATC 82717 |||||| || || ||||||||||||| || || ||||| ||||| ||||||||||||| Sbjct 11072111 TTCTAGCTGCTTACCAGCAAAGATTAACCTCTGCTGATCGGGAGGAGTTCCTTCCTTATC 11072170 Query 82718 TTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGG-TTCTACTTCCAAAGTTATCG 82776 || ||||| | ||||||||||| || || || || ||| | | | || || | Sbjct 11072171 CTGGATCTTGGTCTTTACATTTTCTATAGTGTCCGAGGGTTTCAAACTTGAGCGTGATGG 11072230 Query 82777 TCTTGCCTGTCAACGTCTTTACAAATATCTGCATTAT 82813 |||| || || | ||||| ||||| |||||||| || Sbjct 11072231 TCTTCCCCGTAAGGGTCTTCACAAAAATCTGCATCAT 11072267 >seq286 Length=88201929 Score = 96.9 bits (106), Expect = 7e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| || || || || | || || ||||| | | | | || |||| || || Sbjct 25394613 TGGAGAGTGGACTCCTTTTGAACGTTGTAGTCAGACAAAGTACGGCCACCTTCCAGCTGC 25394672 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||| || | | ||||| ||||| ||||| ||||||||| ||| || |||| Sbjct 25394673 TTACCAGCGAATGTCAACCTTTGCTGATCAGGAGGAGTTCCTTCCTCATCCTGGATCTGG 25394732 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || ||||||||||| || || || ||||| || || | | || ||||| ||| | Sbjct 25394733 GCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCATGATGGTCTTCCCTATA 25394792 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | ||||| ||||| |||||||| Sbjct 25394793 AGGGTCTTCACAAAAATCTGCAT 25394815 Score = 89.7 bits (98), Expect = 1e-12 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 82598 CAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTC 82657 ||| || || || || | || || || | || || || ||||| | | | | || || Sbjct 36932174 CAGCACAAAATGGAGCATGGACTCCTTTTAAATGTTGTAGTCAGACAAAGTACAGCCATC 36932115 Query 82658 TTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATC 82717 |||||| || || |||||||||| | || || |||| ||||| |||||||||| ||| Sbjct 36932114 TTCTAGCTGCTTACCAGCAAAGACCAACCTCTGCTGATGAGGAGGAATTCCTTCCTCATC 36932055 Query 82718 TTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGT 82777 || ||||| || ||||||||||| || || || || || || | | | || || Sbjct 36932054 CTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGCTCAACATTGAGCATGATGGT 36931995 Query 82778 CTTGCCTGTCAACGTCTTT 82796 ||| ||||| | |||||| Sbjct 36931994 CTTCCCTGTAAGGGTCTTT 36931976 >seq271 Length=90843779 Score = 93.3 bits (102), Expect = 8e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || || || || || || || || || ||||| | | | |||||||| ||||| Sbjct 5163282 TGGAGCGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGCACGGCCGTCTTCCAGTTGC 5163223 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||| |||| || || || || || ||||| |||||||||| ||| || ||||| Sbjct 5163222 TTACCAGCCAAGACCAGCCTCTGCTGGTCAGGAGGAATTCCTTCCTCATCCTGGATCTTG 5163163 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || ||||||||||| || | ||||| || | | | || ||||| ||||| Sbjct 5163162 GCCTTTACATTTTCTATATGGCCCACGGGTTCAACCTGGAGCGCGATGGTCTTCCCTGTA 5163103 Query 82788 AACGTCTTTACAAATATCTGCATTAT 82813 | ||| | ||||| ||||||| || Sbjct 5163102 AGGGTCATCACAAAATTCTGCATCAT 5163077 Score = 91.5 bits (100), Expect = 3e-13 Identities = 138/195 (71%), Gaps = 1/195 (1%) Strand=Plus/Plus Query 82620 TCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAG 82679 ||||| || || || || ||||| | | | | | |||||| || || || ||||||||| Sbjct 33023849 TCTTTTTGAATGTTGTAGTCAGACAAAGTACGGCTGTCTTCCAGCTGCTTACCAGCAAAG 33023908 Query 82680 ATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA-TCTTGAATCTTTGCTTTTACATT 82738 | | || || | | | ||||| ||||||||||| ||| || |||| || ||||||| Sbjct 33023909 ACCAACCTCTGCTCACCAGGAGGAGTTCCTTCCTTATTCTGGATTCTTGGCCTTTACATG 33023968 Query 82739 TTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTAC 82798 ||| | || || ||||| | || | || || ||||| || || | ||||| || Sbjct 33023969 TTCTGTAGTGTCCGAGGGTTCACCCTCGAGCGTGATGGTCTTCCCCGTAAGGGTCTTCAC 33024028 Query 82799 AAATATCTGCATTAT 82813 ||| |||||||| || Sbjct 33024029 AAAAATCTGCATCAT 33024043 >seq166 Length=122095297 Score = 91.5 bits (100), Expect = 3e-13 Identities = 142/203 (70%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || || || || || || | || || ||||| | | | | || ||||| | || Sbjct 98975368 TGGAGGGTGGACTCCTTTTGAACGTTGTAGTCAGACAAAGTACGGCCATCTTCCAACTGC 98975427 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || |||||||||| || || ||||| || || |||||||| |||| || ||||| Sbjct 98975428 TTACCAGCAAAGAC----CTCTGCTGATCAGGGGGAGTTCCTTCCCTATCCTGGATCTTC 98975483 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || ||||||||||| || || || ||||| || || | | || ||||| ||||| Sbjct 98975484 GCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGTCTGATGGTCTTCCCTGTA 98975543 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | |||| ||||| |||||||| Sbjct 98975544 AGGCTCTTCACAAAAATCTGCAT 98975566 >seq154 Length=133307652 Score = 91.5 bits (100), Expect = 3e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | || ||||| |||| |||| ||||| |||||||| || || || || || Sbjct 35423259 CCACCGCACAGACGCAACACTAGGTGCCAGGTAGACTCTTTCTGGATGTTGTAGTCGGAA 35423318 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | || || ||||| ||||| | || || || || || ||||| ||||| || Sbjct 35423319 AGGGTGTGGCCTTCCTCTAGCTGTTTGCTGGCGAATATCAGCCTCTGTTGGTCTGGTGGG 35423378 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCA 82751 ||||||||||| ||||| ||||| || || ||| | || ||| | ||| Sbjct 35423379 ATTCCTTCCTTGTCTTGGATCTTGGCCTTGACAATCTCGATCTTGTCA 35423426 >seq258 Length=90668790 Score = 84.2 bits (92), Expect = 4e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| || || || || || || || ||||| | | | | || ||||| || || Sbjct 53113531 TGGAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGGCCATCTTCCAGCTGC 53113590 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||| |||||| || || || || || ||||| ||||||||| ||| || || || Sbjct 53113591 TTACCAACAAAGACCAGCCTCTGCTGGTCAGGAGGAGTTCCTTCCTCATCCTGGATGTTG 53113650 Query 82728 GCTTTTACATTTTC 82741 |||||||||||||| Sbjct 53113651 GCTTTTACATTTTC 53113664 >seq129 Length=145729302 Score = 84.2 bits (92), Expect = 4e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721 || || || ||||| ||||| | | || ||||| ||||| |||||||||||||| || Sbjct 3012303 AGCTGCTTGCCAGCCAAGATCAACTTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 3012244 Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTA-TCGTCTT 82780 || || || ||||||||||| || || || ||||| || || | || | | |||| Sbjct 3012243 ATTTTGGCATTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCAAGCGTGATTGGTCTC 3012184 Query 82781 GCCTGTCAACGTCTTTAC-AAATATCTGCA 82809 ||||| | ||||| || ||| ||||||| Sbjct 3012183 CCCTGTAAGGGTCTTCACAAAAAATCTGCA 3012154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981815186423745