Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rattus_20norvegicus_20[refseq_20GCF_5F000001895.5_202014-07-01] 955 sequences; 2,870,184,193 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq174 158 2e-32 seq297 154 2e-31 seq271 152 7e-31 seq31 152 7e-31 seq258 87.8 3e-11 >seq174 Length=112626471 Score = 158 bits (174), Expect = 2e-32 Identities = 173/229 (76%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||||||||| |||| |||| || |||| ||||| Sbjct 45289897 TACAAGGTGCTGAAGCAGGTGCACCCGGACACCGG-----CATC-TCGTCCAAGGCCATG 45289950 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| || ||||||| ||| Sbjct 45289951 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCAGCGAGGCCTCCCGC 45290010 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | |||||||||| || ||| | |||||| | ||||| ||||||||| Sbjct 45290011 CTGGCTCATTACAACAAGCGCTCGACCATCACGTCCCGCGAGGTGCAGACGGCCGTGCGC 45290070 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| || || ||||||| ||| ||||| || || ||||||| Sbjct 45290071 CTGCTGCTGCCTGGGGAGCTGGCCAAGCATGCCGTGTCGGAAGGCACCA 45290119 Score = 158 bits (174), Expect = 2e-32 Identities = 173/229 (76%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||||||||| |||| |||| || |||| ||||| Sbjct 45297175 TACAAGGTGCTGAAGCAGGTGCACCCGGACACCGG-----CATC-TCGTCCAAGGCCATG 45297122 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| || ||||||| ||| Sbjct 45297121 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCAGCGAGGCCTCCCGC 45297062 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | |||||||||| || ||| | |||||| | ||||| ||||||||| Sbjct 45297061 CTGGCTCATTACAACAAGCGCTCGACCATCACGTCCCGCGAGGTGCAGACGGCCGTGCGC 45297002 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| || || ||||||| ||| ||||| || || ||||||| Sbjct 45297001 CTGCTGCTGCCTGGGGAGCTGGCCAAGCATGCCGTGTCGGAAGGCACCA 45296953 >seq297 Length=62275575 Score = 154 bits (170), Expect = 2e-31 Identities = 379/566 (67%), Gaps = 13/566 (2%) Strand=Plus/Plus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 |||||| | ||| | || || || ||| || || | || |||||| ||||| Sbjct 25391961 GAGCCGTTACTGAGAGAAAATCCCCGCCGTTTCGTTGTCTTTCCCATCGAATACCATGAT 25392020 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT 1455835 || ||| | |||||| | |||| | ||||||||||||||||| ||||||||||| ||||| Sbjct 25392021 ATCTGGCAGATGTACAAGAAAG-CTGAGGCCTCCTTTTGGACTGCCGAGGAGGTGGACCT 25392079 Query 1455836 CGGCGCCGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCA 1455895 | || | ||||||| | |||| || ||| | ||||| || || Sbjct 25392080 TTCCAAGGATATTCAGCACTGGGAAGCTCTGAAACCAGATGAGAGACATTTTATATCTCA 25392139 Query 1455896 CGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCT 1455955 || || ||||| ||| || || || |||||||| || |||||| ||| | || | Sbjct 25392140 TGTTCTGGCCTTCTTT-GCGGCGAGTGATGGCATAGTCAATGAGAACTTGGTGGAGCGAT 25392198 Query 1455956 TTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCG 1456015 ||| |||| || ||| | ||||||| || | || || || ||||| || ||||| | Sbjct 25392199 TTAGCCAAGAAGTTCAAGTCACAGAGGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGG 25392258 Query 1456016 AAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCG 1456075 | ||||| ||||| |||| ||| ||||| || ||||| ||| | || || | | Sbjct 25392259 AGAACATACACTCCGAAATGTACAGTCTCCTTATTGACACTTACATTAAAGATTCCAAAG 25392318 Query 1456076 AGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACT 1456135 | | || | ||||| |||||| || || |||| | |||| ||| ||||| |||| Sbjct 25392319 AAAGAGAATATCTCTTCAACGCCATTGAGACAATGCCTTGTGTGAAGAAGAAGGCTGACT 25392378 Query 1456136 GGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGG 1456192 |||| || ||||| |||| |||| | || | || || || | || | Sbjct 25392379 GGGCCTTGCGTTGGATTGGGGACAAAGAGG----CTAC-GTATGGAGAACGAGTTGTGGC 25392433 Query 1456193 CTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATCTTTTGGCTCA 1456250 ||| || || || || || ||||| || || || ||| ||| | || || ||||||| Sbjct 25392434 CTTCGCTGCGGTAGAAGGAATCTTCTTTTCTGGTTCTTT-TGCATCAATATTCTGGCTCA 25392492 Query 1456251 AGAAGCGCGGCCTCATGCCCGGTCTT 1456276 |||| || || || ||||| || ||| Sbjct 25392493 AGAAACGGGGACTGATGCCGGGCCTT 25392518 >seq271 Length=90843779 Score = 152 bits (168), Expect = 7e-31 Identities = 172/229 (75%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||| |||||||| || | |||| || |||| ||||| Sbjct 43689098 TACAAGGTGCTGAAGCAAGTGCACCCGGACACAGG-----CATC-TCTTCCAAGGCCATG 43689045 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| || |||||||| |||| ||||||| |||||| ||| Sbjct 43689044 GGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 43688985 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 |||||| | |||||||||| || ||| | || ||||||||||| ||||||||| Sbjct 43688984 TTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACAGCCGTGCGC 43688925 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| ||| |||||| ||||||||| ||||||||||||| Sbjct 43688924 CTGCTACTGCCCGGTGAATTGGCCAAGCACGCCGTTTCCGAGGGCACCA 43688876 Score = 149 bits (164), Expect = 9e-30 Identities = 171/229 (75%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||| |||||||| |||| |||| || |||| ||||| Sbjct 43628056 TACAAGGTGCTGAAGCAAGTGCACCCGGACACCGG-----CATC-TCTTCCAAGGCCATG 43628109 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| || |||||||| |||| ||||||| |||||| ||| Sbjct 43628110 GGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 43628169 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | || ||||||||||||||||||||| Sbjct 43628170 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACCGCCGTGCGC 43628229 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| || || ||||||| |||||| || || || ||||||| Sbjct 43628230 CTGCTGCTGCCGGGGGAGCTGGCCAAGCACGCGGTGTCGGAAGGCACCA 43628278 Score = 149 bits (164), Expect = 9e-30 Identities = 171/229 (75%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||| |||||||| |||| ||| || |||| ||||| Sbjct 43808799 TACAAGGTGCTGAAGCAAGTGCACCCGGATACCGGA-----ATC-TCTTCCAAGGCCATG 43808852 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| || |||||||| |||| ||||||| ||||| ||| Sbjct 43808853 GGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCGGGAGAGGCGTCGCGC 43808912 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | || ||||||||||| ||||||||| Sbjct 43808913 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 43808972 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| || ||||||| |||||| || ||||||||||||| Sbjct 43808973 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCGGTGTCCGAGGGCACCA 43809021 Score = 149 bits (164), Expect = 9e-30 Identities = 171/229 (75%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||| || ||||| |||||||| |||| |||| || |||| ||||| Sbjct 44758044 TACAAGGTACTGAAGCAAGTGCACCCGGACACCGG-----CATC-TCTTCCAAGGCCATG 44757991 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 || ||||||||||| || |||||||| |||| ||||||| |||||| ||| Sbjct 44757990 GGCATAATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 44757931 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | || ||||||||||| ||||||||| Sbjct 44757930 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 44757871 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| || ||||||| |||||| || ||||||||||||| Sbjct 44757870 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCTGTGTCCGAGGGCACCA 44757822 Score = 149 bits (164), Expect = 9e-30 Identities = 171/229 (75%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||| |||||||| |||| |||| || |||| ||||| Sbjct 44834179 TACAAGGTGCTGAAGCAAGTGCACCCGGACACCGG-----CATC-TCTTCCAAGGCCATG 44834126 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| || |||||||| |||| ||||||| |||||| ||| Sbjct 44834125 GGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 44834066 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | |||||||||| ||| ||| | || ||||||||||| || ||||| Sbjct 44834065 CTGGCTCATTACAACAAGCGCTCCACTATCACGTCCCGGGAGATCCAGACGGCGGTGCGT 44834006 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| || || ||||||| ||||||||| ||||||||||||| Sbjct 44834005 CTGTTGCTGCCGGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 44833957 Score = 147 bits (162), Expect = 3e-29 Identities = 173/231 (75%), Gaps = 10/231 (4%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||| |||||||| || || |||| || ||| ||||| Sbjct 44793710 TACAAGGTGCTGAAGCAAGTGCACCCGGACAC-----GGGCATC-TCTTCTAAGGCCATG 44793657 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| || |||||||| |||| ||||||| |||||| ||||| Sbjct 44793656 GGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCGGGCGAGGC--GTCGC 44793599 Query 725034 --CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091 || |||| | |||||||||| || ||| | || ||||||||||| ||||||| Sbjct 44793598 GTCTAGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGC 44793539 Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| | ||| ||| || ||||||| |||||| || ||||||||||||| Sbjct 44793538 GCCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCTGTGTCCGAGGGCACCA 44793488 Score = 143 bits (158), Expect = 4e-28 Identities = 170/229 (74%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||| |||||||| || || |||| || |||| ||||| Sbjct 44520114 TACAAGGTGCTTAAGCAAGTGCACCCGGACAC-----GGGCATC-TCTTCCAAGGCCATG 44520061 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| || |||||||| |||| ||||||| |||||| ||| Sbjct 44520060 GGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 44520001 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | || ||| ||||||| || |||||| Sbjct 44520000 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGGTCCAGACGGCTGTGCGC 44519941 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | | | ||| || ||||||| |||||| || ||||||||||||| Sbjct 44519940 CTGCTGCTTCCCGGGGAGCTGGCCAAGCACGCGGTGTCCGAGGGCACCA 44519892 Score = 143 bits (158), Expect = 4e-28 Identities = 170/229 (74%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||| || ||||| || || |||| || |||| ||||| Sbjct 44527675 TACAAGGTGCTGAAGCAAGTACACCCGGACAC-----GGGCATC-TCTTCCAAGGCCATG 44527622 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| || |||||||| | || ||||||| |||||| ||| Sbjct 44527621 GGCATCATGAACTCGTTCGTGAACGACATCTTTGAGCGCATCGCGGGCGAGGCGTCGCGC 44527562 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| || ||| | || ||||||||||| ||||||||| Sbjct 44527561 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 44527502 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | | | || || ||||||| |||||| || ||||||||||||| Sbjct 44527501 CTGTTGCTTCCTGGGGAGCTGGCCAAGCACGCGGTGTCCGAGGGCACCA 44527453 Score = 143 bits (158), Expect = 4e-28 Identities = 170/229 (74%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||| || ||||| || || |||| || |||| ||||| Sbjct 44738204 TACAAGGTGCTGAAGCAAGTACACCCGGACAC-----GGGCATC-TCTTCCAAGGCCATG 44738151 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| || |||||||| |||| ||||||| |||||| ||| Sbjct 44738150 GGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 44738091 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | || ||||||||||| ||||||||| Sbjct 44738090 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 44738031 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | | | ||| || |||||| |||||| || ||||||||||||| Sbjct 44738030 CTGCTGCTTCCCGGGGAGTTGGCCAAGCACGCGGTGTCCGAGGGCACCA 44737982 Score = 131 bits (144), Expect = 2e-24 Identities = 169/232 (73%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 || || |||||||| ||||| |||||||| |||| |||| || |||| || Sbjct 43423278 ATTTATAAGGTGCTGAAGCAAGTGCACCCGGACACCGG-----CATC-TCTTCCAAGGCC 43423331 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||||| || || | ||||| |||| ||||||| |||||| Sbjct 43423332 ATGAGCATCATGAACTCCTTCGTGACAGACATCTTCGAGCGCATCGCGGGCGAGGCATCG 43423391 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 |||||||||| | |||||||||| || ||| | || ||||||||||| || || Sbjct 43423392 CGCCTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCTGTC 43423451 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||||| | ||| ||| || ||||||| |||||| || ||||||||||||| Sbjct 43423452 CGCCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCTGTGTCCGAGGGCACCA 43423503 Score = 125 bits (138), Expect = 1e-22 Identities = 166/229 (72%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||| ||||| || || || |||| || |||| ||||| Sbjct 44748608 TACAAGGTGCTTAAGCAAGTGCATCCGGACAC-----GGGCATC-TCTTCCAAGGCCATG 44748661 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 || ||||||||||| || |||||||| |||| ||||||| |||||| ||| Sbjct 44748662 GGCATAATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 44748721 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | |||||||||| || ||| | || ||||||||||| || ||||| Sbjct 44748722 CTGGCTCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCGGTGCGT 44748781 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | | | ||| || |||||| |||||| || ||||||||||||| Sbjct 44748782 CTGTTGCTTCCCGGGGAGTTGGCCAAGCACGCTGTGTCCGAGGGCACCA 44748830 Score = 123 bits (136), Expect = 4e-22 Identities = 170/231 (74%), Gaps = 10/231 (4%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||| |||||||| |||| ||| || |||| ||||| Sbjct 43817503 TACAAGGTGCTGAAGCAAGTGCACCCGGATACCGGA-----ATC-TCTTCCAAGGCCATG 43817556 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| || |||||||| |||| ||||||| ||||| ||| Sbjct 43817557 GGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCGGGAGAGGCGTCGCGC 43817616 Query 725034 CTGGCGCGCTCCAACAAGCGC-AACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCG 725092 ||||||| | |||||||||| || ||| | || | ||||||||| |||||||| Sbjct 43817617 CTGGCGCATTACAACAAGCGCTCGGACCATCACGTCCCG-GGGATCCAGACGGCCGTGCG 43817675 Query 725093 CCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGA-GGGCACCA 725142 |||| | ||| ||| || ||||||| |||||| || ||||| |||||||| Sbjct 43817676 CCTGCTGCTGC-CGGGGAGCTGGCCAAGCACGCGGTGTCCGAGGGGCACCA 43817725 Score = 122 bits (134), Expect = 1e-21 Identities = 171/232 (74%), Gaps = 11/232 (5%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||| || ||||| |||||||| |||| | ||| || |||| ||||| Sbjct 43778851 TACAAGGTTCTGAAGCAAGTGCACCCGGACACCGGT-----ATC-TCTTCCAAGGCCATG 43778798 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCA-TCGGCACCGAGGCCGGTCG 725032 ||||||||||| || || |||||||| |||| |||| ||| ||||||| | || Sbjct 43778797 GGCATCATGAACTCATTCGTGAACGACATCTTCGAACGCAATCGCGGGCGAGGCCCG-CG 43778739 Query 725033 CCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCG 725092 ||||||| | |||||||||| || ||| | || ||||||||||| |||||||| Sbjct 43778738 TCTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCG 43778679 Query 725093 CCTG-ATCATGCGCGGCGAACTGGCC-AGGCACGCCGTCTCCGAGGGCACCA 725142 |||| | ||| ||| || |||||| || ||||| || |||||||||||| Sbjct 43778678 CCTGCCTGCTGCCCGGGGAGCTGGCCAAGCCACGCGGT-GCCGAGGGCACCA 43778628 Score = 111 bits (122), Expect = 2e-18 Identities = 166/230 (72%), Gaps = 8/230 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||| |||||||| || ||| |||| || ||| ||||| Sbjct 44841813 TACAAGGTGCTTAAGCAAGTGCACCCGGACAC---TGG--CATC-TCTTCTAAGGCCATG 44841866 Query 724974 TCGATC-ATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCG 725032 || ||||||||||| || |||||||| |||| | ||||| |||||| || Sbjct 44841867 GGCATTTATGAACTCGTTCGTGAACGACATCTTCGAGC-CATCGCGGGCGAGGCGTCGCG 44841925 Query 725033 CCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCG 725092 |||| | | | |||||||||| || ||| | || ||| ||||||| |||||||| Sbjct 44841926 CCTGCCTCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGGTCCAGACGGCCGTGCG 44841985 Query 725093 CCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||| | | | ||| || ||||||| ||| || || ||||||||||||| Sbjct 44841986 CCTGCTACTACTCGGGGAGCTGGCCAAGCAGGCGGTGTCCGAGGGCACCA 44842035 Score = 93.3 bits (102), Expect = 6e-13 Identities = 169/236 (72%), Gaps = 16/236 (7%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||| |||||||| ||| | ||| || |||| ||||| Sbjct 43764799 TACAAGGTGCTGAAGCAAGTGCACCCGGATACC-----GGCAT-CTTTTCCAAGGCCATG 43764852 Query 724974 TCGATCATGAACTCGTTTGTCA-ACGACATGATCGACCGCATCGGCACCGAGGCCGGTCG 725032 | |||||||||||||| || | | ||||| |||| |||||| || |||||| || Sbjct 43764853 GC-ATCATGAACTCGTTCGTGACAAGACATCTTCGAACGCATC-GCGGCGAGGCGTCGCG 43764910 Query 725033 CCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGA---CCGCCGT 725089 |||||||| | ||||| || || ||| | || |||||||||| | ||||| Sbjct 43764911 CCTGGCGCATTACAACACAGGCTCGACCATCACGTCCCG-GAGATCCAGAGGGCGGCCGT 43764969 Query 725090 -GCGCCTGAT-CATGCGCGGCGAACTGGCCAGGCACGCC-GTCTCCGAGGGCACCA 725142 | ||||| | || ||| || ||||||| ||||||| || ||||||||||||| Sbjct 43764970 GGGGCCTGCTGTGGGCCCGGGGAGCTGGCCAAGCACGCCGGTGTCCGAGGGCACCA 43765025 >seq31 Length=266435125 Score = 152 bits (168), Expect = 7e-31 Identities = 172/229 (75%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||| || || || |||| || |||| ||||| Sbjct 198361124 TACAAGGTGCTGAAGCAGGTGCATCCGGACAC-----GGGCATC-TCGTCCAAGGCCATG 198361177 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||||||||| ||||| |||| ||||||| | |||||| |||| Sbjct 198361178 GGCATCATGAACTCGTTTGTCAATGACATCTTCGAGCGCATCGCAAACGAGGCTTCTCGC 198361237 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | ||||||||| || ||| |||| ||||||||||| || ||||| Sbjct 198361238 CTGGCGCATTACAACAAGCGGTCTACAATCACATCGCGGGAGATCCAGACGGCGGTGCGT 198361297 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| ||| |||||||| | |||||| || || |||||||||| Sbjct 198361298 CTCCTACTGCCCGGAGAACTGGCTAAGCACGCTGTGTCGGAGGGCACCA 198361346 Score = 104 bits (114), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||| |||||||| ||| | ||| ||| ||| ||||| Sbjct 198418817 TACAAGGTGCTGAAGCAAGTGCACCCGGACACC-----GGCAT-CTCATCTAAGGCCATG 198418870 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||| || || || |||||||| |||| ||||||| |||||| || Sbjct 198418871 GGTATCATGAATTCCTTCGTGAACGACATCTTCGAGCGCATCGCAGGTGAGGCCTCCCGT 198418930 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | || ||||| ||||| |||||||| Sbjct 198418931 CTGGCGCATTACAACAAGCGCTCGACCATCACTTCCCGGGAGATACAGACGGCCGTGCGT 198418990 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | | | ||| || |||| | || || || || |||||||||| Sbjct 198418991 CTGCTGCTTCCCGGGGAGTTGGCTAAACATGCTGTGTCGGAGGGCACCA 198419039 >seq258 Length=90668790 Score = 87.8 bits (96), Expect = 3e-11 Identities = 162/231 (70%), Gaps = 9/231 (4%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||| |||||| | ||| ||||||| |||| | || |||| || |||| ||||| Sbjct 59524254 TACAGGGTGCTGACGCAAGTGCACCT--GAAC---TCGGGCATC-TCTTCCAAGGCCATG 59524307 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT-CG 725032 |||||||||||||| || ||||| | |||| |||| | | | || | | || Sbjct 59524308 GGCATCATGAACTCGTTCGTAAACGATACCTTCGAATGCATTGTGGGC-AAGCTGTTACG 59524366 Query 725033 CCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCG 725092 |||||||| | |||||||||| || ||| | | ||||||||| | ||| || | Sbjct 59524367 CCTGGCGCATTACAACAAGCGCTTAACCATCACGTCCTGGGAGATCCAGGCAGCCATGTG 59524426 Query 725093 CCTGATCATG-CGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||| | || | | | || ||||||| ||| || || |||||||||||| Sbjct 59524427 CCTGCTGCTGCCCCCGGGAGCTGGCCAAGCATGCTGTGCCCGAGGGCACCA 59524477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177719088494710