Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rattus_20norvegicus_20[refseq_20GCF_5F000001895.5_202014-07-01] 955 sequences; 2,870,184,193 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq232 583 1e-161 seq297 435 4e-117 seq1 120 4e-22 seq117 116 5e-21 seq129 114 2e-20 >seq232 Length=115493446 Score = 583 bits (646), Expect = 1e-161 Identities = 1492/2252 (66%), Gaps = 57/2252 (3%) Strand=Plus/Minus Query 75362 TTATTCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTAC 75421 || ||||| | || ||||| || || ||| || ||| |||| | || ||| ||| Sbjct 76911780 TTTTTCTTGTTCAGAGTGAAGTGGATTGGATTAACAGCGGGTCTTGTCCTTAAATAATAC 76911721 Query 75422 ATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAA 75481 || | ||| |||| |||| | |||| || || || ||||| || ||||||||| || Sbjct 76911720 ATCCGAGTCTTTAAACCCTGCTTCCAACCATAAAAGTGCATACTAGTTAGTTTGCCGTAG 76911661 Query 75482 CTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCA 75541 | || || || ||||| || || | ||||| ||||||| || |||| | ||||| ||| Sbjct 76911660 TTGGGCTCAGCAATATGGATGTTTAAAGACTGGCTTTGATTGACGAAAACGCCTCTCTCA 76911601 Query 75542 GCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTG 75601 || ||||| || | || ||||| |||| |||||||| || || || | | ||| || Sbjct 76911600 GCTGCCATCTTGAGAACAGTCTTCTGAGAGATTTCCCACATGGTCTTACAGAGTTGCTTC 76911541 Query 75602 ATATCATCTGGAAGATTTG-TAT--TTTGAATGGATCCGCCAT--CAGATA-TAATTGTA 75655 | | ||| |||| | || || | |||||||| ||||| ||| | | || | Sbjct 76911540 AGGTTATCAGGAATTTCTGGTAAGCTCTGAATGGA---GCCATTGCAGGCAGTGATCTGA 76911484 Query 75656 TTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTA 75715 || || ||||| ||||||||||| ||| || | | || | || | ||||||| Sbjct 76911483 TTTTTCATCTCTTCATTCCACAAACCCTGCTCAGTAAGATCTTTCAGTAAGCGAGGATTC 76911424 Query 75716 ACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCC 75775 ||||| ||||||||||| ||||| ||||| | |||||| || ||||||| || | || Sbjct 76911423 ACAATCTGAAATTCTCCTGACAAGACTCTGCAAGTGTAGATGCTACTGGTGTAAGCCTCA 76911364 Query 75776 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAAT 75835 | || | ||| || | || ||| ||||||||| ||||||| ||||| || || | | | Sbjct 76911363 ATGGACTGATTATTCCTCAGAATCTGAGCAGTTAAAGCAGTAGGCATTGGGGCAATAAGT 76911304 Query 75836 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 75895 ||||| ||||| | ||| | || || || | || ||| ||||| ||||| || Sbjct 76911303 AAACTGTTTCTTATACCGTACTTTGCAATCTTCCCCTTGAGAAGCTTCCAGTCCCACAGG 76911244 Query 75896 TCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCA 75955 |||| || | ||||| ||| | ||| || || ||||| || ||||| | ||||| Sbjct 76911243 TCTGTAGGAATAACATTCCACATATCATACTGAAGAATACCTTTGCTGACTGGAGATCCC 76911184 Query 75956 TTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCG 76015 | ||| |||| || | || | | | ||||| || || || || || | || || Sbjct 76911183 TCATACGTTTTGTCGGGGCCATATTCCTTGGCTAGGTCACAGCTGGCTTCCAGGGCTCCA 76911124 Query 76016 TAATAAATTGTTTCGAAAATCTTCTTA-TTAAGATCTTGCGCTTCAAGACTATCAAAAGG 76074 |||||||| ||||| || || | |||| |||| | | || ||||| | || || Sbjct 76911123 TAATAAATGGTTTCAAAGATTTGCTTATTTAATAAC-TGGGCTTCTGGGCTCTC------ 76911071 Query 76075 ATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATG 76134 || || || ||||||||||| || || || ||||| ||||| || | ||| Sbjct 76911070 ----------AGGATGAAAGCATCTGCTAGACCTTGTACCCCAATTCCAATGGGCCGATG 76911021 Query 76135 TCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATT 76194 ||||| || | | || |||||||||||||| || || ||||| || |||||||| Sbjct 76911020 GTGTTTATTTGATAAGTGTGCCTCTGGAATAGGGTAGTAGTTTATATCAATTATTTTATT 76910961 Query 76195 GAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA---TTTTCC 76251 ||||| ||||| |||||| || || ||||| ||| ||| | | | | Sbjct 76910960 CGGATTTTGGACAATGACTTTAGTGACTTCTGCCAGTTTCTCAAAGTCATACGTATGTTC 76910901 Query 76252 ATCTATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGC 76311 | | || |||| || ||||| | ||| || | ||||||| || ||||||| | Sbjct 76910900 TGGTGTGACCTACATGTTGAGAGCCAGAGAAGCCAAGTTACAAATTGCAACCTCATCTTC 76910841 Query 76312 ATTG--GCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTT 76369 | || ||| | ||||||||| || || | || || ||||| ||||| || || Sbjct 76910840 ACTGGTGCAACT----CTATCTCCGTACACAGGTGGCTGCATTTGATGGTTCCCAGGTTC 76910785 Query 76370 TGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCA 76429 |||||| ||||||| || ||| |||| || || || | | || || || || || Sbjct 76910784 TGTTGGCTGCTCTTCGGGTCACAGAAGTCTTTGTAGAGCATGTATGGGGTACCCGTCTCT 76910725 Query 76430 ATCTGTGATTCGATAATAGATTTCCAGA-CGACTCTAGCTTTTATTATAGATTTGTATCG 76488 ||| || | || || | | ||| | | || | ||||| | | ||| | Sbjct 76910724 GCCTGAGACCCAATGATGGCGTACCAAAGCTGCT-GAACTTTTCACA-ACTTTTCAGACA 76910667 Query 76489 CTTCTCT-CTT-TCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCC 76546 | | || ||| || || | ||||||| || || || |||||| |||| || ||| Sbjct 76910666 CGACCCTGCTTCTCGTAACTTTCATATAACTTCTCGAACTCCTCTCCCTAAACCTCGTCC 76910607 Query 76547 AAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTC 76606 | ||||||||| ||||| |||||||||| ||||| || | || || || ||| Sbjct 76910606 AGACCAGGACACTCATTGGGACACATCAGTGACCGGTCCTGGTTAGTCTCTACTCGCTTC 76910547 Query 76607 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTT 76666 || ||||||| || |||| || || | || ||||| | | | ||||||| || Sbjct 76910546 ATGAAGAGATTTGGGATCCGAAGTGCGAAGAAGAGATCCCACGCTTGCTGTTCTTCCTTG 76910487 Query 76667 CCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATC-AG------AATGCCATGGTTC 76719 ||||| ||||| || | || |||||||| | || || || ||||| || | Sbjct 76910486 CCTGTGTTCTTCTTCAAGTCAAGGAACTCAAAGATGTCTAGGTGGTTGGTGCCAAGGCTT 76910427 Query 76720 TAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGT 76779 || || || || | | ||||| || || || || || ||||| | || | || || Sbjct 76910426 CAGGTAAATAGCAAATGCCCCCGGGCGCTTGTTTCCACCTTGATCCACGTAAC-AGCTGT 76910368 Query 76780 GTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAAT 76839 ||| |||| ||||||| | ||| | || | ||||| | | || || |||| ||| Sbjct 76910367 GTTGTTATGTACTCTCAGCGTTGACACAAGACAATTAGAATTGCTGTTAGTCCCAGCAAT 76910308 Query 76840 ATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGA 76899 || || ||| || |||||| | | | | | | ||||| || || ||||| Sbjct 76910307 GTAGCTACCAATGGCCCGAATACAATTCA-CGCAACACTGATTCCCCCAGCAGACTTAGA 76910249 Query 76900 GATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTT 76959 || | | | | | |||| || ||||| || ||||| || || ||| | |||| | Sbjct 76910248 AATCAAGGAATACTGCTTCAGAGTATCATAAATTCCCTCAATGCTGTCACCTTTCATACT 76910189 Query 76960 AAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGA 77019 | || ||||||| ||||| || || | || || ||||| || | | ||||| Sbjct 76910188 CAAGAGGAAACAGCGAGACAGCTG-TGGGCAGTGGTCCCAGCATTGAAGAGAATCGGAGA 76910130 Query 77020 TGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC 77079 || ||||| || || || |||||||||||||||||||||||||| | || || ||||| Sbjct 76910129 GGCTTGAGTAAATCACTTCTCAGAAAGTAGATTGTATGTTTCAATTGCAGCATCAATATC 76910070 Query 77080 CCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTT 77139 || ||||| || |||| || | ||||||||||||||| |||||||| | || Sbjct 76910069 TTCTTTGTGAATCCCCACAGATACCCTCATCAACATATGCTGCGGTCGTTCAGCCACTTT 76910010 Query 77140 ATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGA 77199 | | || |||||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 76910009 TCCACTGATCTTCAACAAATATGACCGTTCCAGTGTCTTAAAACCAAAGTAGTTGTAAAC 76909950 Query 77200 AAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATC 77259 || | | || || ||||| | ||||| || | || |||| ||||||| || Sbjct 76909949 GAAATTCCAGTCATAGATAATGGCAGAATTCAGGTGATCTTTATTAGCCATAACAATGTC 76909890 Query 77260 CATGACAGTGGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAAA 77319 | | | | | | || ||||| | | | || | ||||| | ||||| | Sbjct 76909889 AAGTGCTGAACTGGCCACCATGGGAGAATATCTGCTGTTGTGTGGATTCATGTAGTTGTA 76909830 Query 77320 TAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGC 77379 | || ||||| | |||| || | ||| |||||||| ||||| | || || || || Sbjct 76909829 GAGATCCTCCATCCCATCGCCGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGC 76909770 Query 77380 TATTCTAGCAGCTAGAATTGCATAGTCAGGAT-----GTTGTGTAGTGCAGGTGGCTGCT 77434 || || || || || || ||||||||||| | | | ||||| |||||||| ||| Sbjct 76909769 GATCCTTGCTGCCAGGATGGCATAGTCAGGGTGCTTCGCTTCGTAGT-CAGGTGGCAGCT 76909711 Query 77435 ATTTCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAATA 77494 | || || || | || || | ||| | || || || || | | ||| ||||| | Sbjct 76909710 GTCTCAGCAGCCAGGGTGTCCAGTTCCACTGTGGTGACCCCACTGTGTAGGCCTTGGCTT 76909651 Query 77495 ACTTTCATGGCTATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAATTTT 77554 |||||||||| || | |||| | ||||| || | || | |||||||| | ||| Sbjct 76909650 ACTTTCATGGTGATCTGAGCAGGAGCAACAAAGTCCATATTGAGCCCATAACAGAGTTTC 76909591 Query 77555 CTAATACGAGATGTGATTTTATCAAACATGAC 77586 || || ||||| ||||| |||||||| || Sbjct 76909590 TGGATTCGTGATGTAATTTTGTCAAACATAAC 76909559 >seq297 Length=62275575 Score = 435 bits (482), Expect = 4e-117 Identities = 658/933 (71%), Gaps = 6/933 (1%) Strand=Plus/Minus Query 46284 TTAAAAGTCGACATCTAAAGAAAAATGATTATCT-TCT--TGTGACATAACTCCCATTTT 46340 ||| ||||| |||| || | ||| ||| ||| || | |||||| |||||||| | Sbjct 25392923 TTAGAAGTCAGCATCCAAGGTGAAAGAATTTTCTGTCGAATTTGACATTACTCCCATCCT 25392864 Query 46341 TTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 46400 ||||| || ||||| || ||||| || || || ||||| ||||| | ||| ||||| || Sbjct 25392863 CTGGTACTCGCCTACTCGCTTCTCAAAGAAGTTTGTTTTTCCTTCTAGTGAAATATTCTC 25392804 Query 46401 CATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCAG 46460 ||| || ||||| ||||| || || |||| || ||||| || | || || || Sbjct 25392803 CATGAAGTCAAATGGATTTTCTACTTTGAAAATCTTGTTAAAACCCAGCTCCAGCATAAG 25392744 Query 46461 TCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTT 46520 || || || || || || || ||| ||||||| |||||||| || ||||| || Sbjct 25392743 CCTGTCGGCCACAAACTCGATGTACTGCTTCATCAAGGTGCAATTCATCCCGATGAGCTT 25392684 Query 46521 GACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATCGA 46580 || || || ||||| || || ||||| || || || |||| || | | ||||| Sbjct 25392683 CACAGGCAGGGCCTCTGTGAGGAACTCCTGCTCTATCCTGACCGCGTTGGTAATTATTTC 25392624 Query 46581 TGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAATC 46640 | ||||| | | ||| || || | || || || ||||| | || ||||| || Sbjct 25392623 TTTTACTCTCTGCTCCGAGGGCTTGTGTACCAGGTGCTTGAACATCAGGCAGGCAAAGTC 25392564 Query 46641 ACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAG 46700 ||| || || || |||||||| ||||| | ||| || |||||||| || || ||||| || Sbjct 25392563 ACAGTGCAGACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTAAGGCCCGGCATCAG 25392504 Query 46701 TCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTAC 46760 ||| || || |||||||| ||||| | || ||||| ||||||||||| || |||||||| Sbjct 25392503 TCCCCGTTTCTTGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCTAC 25392444 Query 46761 AGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATCCACCTTTG 46817 || ||||| || |||| || ||||| || | || || || | |||||| | Sbjct 25392443 CGCAGCGAAGGCCACAACTCGTTCTCCATACGTAGCCTCTTTGTCCCCAATCCAACGCAA 25392384 Query 46818 AGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtt 46877 ||||| |||||||| ||||| |||||||||||||| || || || || |||||| | | Sbjct 25392383 GGCCCAGTCAGCCTTCTTCTTCACACAAGGCATTGTCTCAATGGCGTTGAAGAGATATTC 25392324 Query 46878 tttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAAT 46937 | |||| | |||||||| || || || || | ||||| |||||||| || || || Sbjct 25392323 TCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAGACTGTACATTTCGGAGTGTAT 25392264 Query 46938 GTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGT 46997 ||| || || || || || || || || ||||| | || || || | || || ||| Sbjct 25392263 GTTCTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCCTCTGTGACTTGAACTTCTTG 25392204 Query 46998 ACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAA 47057 | |||||| || ||| |||||||| ||||| |||||||| || ||||| || |||| Sbjct 25392203 GCTAAATCGCTCCACCAAGTTCTCATTGACTATGCCATCACTCGCCGCAAAGAAGGCCAG 25392144 Query 47058 TACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTT 47117 ||||| ||||||| | | ||||| | |||| | ||||| | ||||| || Sbjct 25392143 AACATGAGATATAAAATGTCTCTCATCTGGTTTCAGAGCTTCCCAGTGCTGAATATCCTT 25392084 Query 47118 TGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCA 47177 || | || || || || || ||||| || || ||||| ||||| || ||||| | ||| Sbjct 25392083 GGAAAGGTCCACCTCCTCGGCAGTCCAAAAGGAGGCCTCAGCTTTCTTGTACATCTGCCA 25392024 Query 47178 TATATCACGATATTGGATCGGAAAAATAACAAA 47210 |||||| | |||| ||| ||||| | ||| || Sbjct 25392023 GATATCATGGTATTCGATGGGAAAGACAACGAA 25391991 >seq1 Length=282763074 Score = 120 bits (132), Expect = 4e-22 Identities = 105/131 (80%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 ||||||||||| ||||| ||||| |||||||| || |||||||| || || || | || Sbjct 167557811 TGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTACTGGTGTAAGGCTCAATGGAC 167557752 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 ||||| || |||| ||| ||||||||||||||||| ||||| || || | | |||||| Sbjct 167557751 TCATTATTCCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 167557692 Query 75842 TTTCTGAGACC 75852 ||||| | ||| Sbjct 167557691 TTTCTTATACC 167557681 Score = 107 bits (118), Expect = 3e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || || ||||| || | || ||||| || ||||| ||||| || ||||||||||||||| Sbjct 167546974 GTCCCAGCATTGAAGAGAGTCGGAGAGGCGTGAGTAAACCACTTCTCAGAAAGTAGATTG 167546915 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 ||||||||||| | || || ||||| || ||||| || |||| || | ||||||| Sbjct 167546914 TATGTTTCAATTGCAGCATCAATATCTTCTTTGTGAATCCCCACAGATACCCTCATCAAC 167546855 Query 77114 ATATGCTGAGGTCGTTC 77130 || ||||| |||| ||| Sbjct 167546854 ATGTGCTGTGGTCTTTC 167546838 Score = 105 bits (116), Expect = 1e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 75444 TCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATAT 75503 |||| |||||||| ||||| || || |||||| ||| | || || || ||||| || | Sbjct 167560806 TCCAACCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTGGGCTCAGCGATATGGATGT 167560747 Query 75504 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 75563 | | ||||| ||||||||||||||||| ||||| || || ||||| || | || |||| Sbjct 167560746 TTAAAGACTGGCTTTGATCGATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTCT 167560687 Query 75564 TTTGAGGAATTTCCCA 75579 | |||| |||||||| Sbjct 167560686 TCTGAGAGATTTCCCA 167560671 Score = 93.3 bits (102), Expect = 6e-14 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 77339 CTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT 77398 || || | ||| |||||||||||||| | || || || || || || || || || || Sbjct 167542543 CTGAACACTTTCTTTGTTTCCTTGTGCAAGTTAGAGACAGCGATCCTTGCTGCCAGGATG 167542484 Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458 ||||||||||| || | ||||| ||||||| ||| | || || || | || || | | Sbjct 167542483 GCATAGTCAGGGTGCTTCGTAGTCAAGGTGGCAGCTGTCTCAGCAGCCAGGGTGTCCAGT 167542424 Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 77504 || | || || || || | ||||| ||||| || |||||||||| Sbjct 167542423 TCCACTGTGGTGACCCCACTGTATAGGCCTTGGATTACTTTCATGG 167542378 Score = 86.0 bits (94), Expect = 9e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 75950 GATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAAC 76009 ||||| | ||| |||||||| | || | || | ||||| || || || || || | Sbjct 167554676 GATCCCTCATACGTTTCGTAGGGGCCATACTCCTTGGCTAGGTCACAGCTGGCTTCCAGG 167554617 Query 76010 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCA 76069 || || ||||| || ||||| || || | |||||| || || ||||| | || ||| Sbjct 167554616 GCTCCATAATAGATGGTTTCAAAGATTTGCTTATTTAGTAGCTGGGCTTCTGGGCTCTCA 167554557 Query 76070 AAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGT 76129 || ||||| | || || || ||||||||||| || || || ||||| ||||| || Sbjct 167554556 AAGGGATACCTCATCAGGATGAAAGCATCTGCTAGACCTTGTACCCCAATTCCAATGGGC 167554497 Query 76130 CTATGTCTCTTATTGGA 76146 | ||| | ||||| || Sbjct 167554496 CGATGGCGTTTATTTGA 167554480 >seq117 Length=147991367 Score = 116 bits (128), Expect = 5e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 |||||||| ||||| | || || |||||||| || || ||||| ||||| || || ||| Sbjct 43887777 TCATCTCTGCTAATAAGCTCATTGGAAAATGTAAGGCCCGGCATCAGTCCCCGTTTCTTG 43887718 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 ||||| ||||| | || ||||| ||||||||||| || |||||||| || ||||| || Sbjct 43887717 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCTACCGCAGCGAAGGCC 43887658 Query 46774 ACAAGTCTCTCTCC 46787 |||| || ||||| Sbjct 43887657 ACAACTCGTTCTCC 43887644 >seq129 Length=145729302 Score = 114 bits (126), Expect = 2e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 46652 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTT 46711 ||||||| || || || | ||| || ||||| || ||||||||||| || || | ||| | Sbjct 76759204 CTTCATCCCTGCTGATCAGTTCATTTGAAAAAGTCAGCCCAGGCATGAGGCCTCTCTTCT 76759263 Query 46712 TGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATG 46771 | ||||| |||||||| || || |||||||| ||||| || ||||||||||| ||||| | Sbjct 76759264 TTAGCCAGAATATAGCAGCAAATGATCCAGAGAAGAAAATCCCTTCTACAGCAGCGAAGG 76759323 Query 46772 CGACAAGTCTCTCTCC 46787 | || | ||| || || Sbjct 76759324 CCACCACTCTTTCCCC 76759339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712925889345600