Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rattus_20norvegicus_20[refseq_20GCF_5F000001895.5_202014-07-01] 955 sequences; 2,870,184,193 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq574 288 1e-72 seq297 224 1e-53 seq954 178 1e-39 seq731 178 1e-39 seq710 178 1e-39 seq498 178 1e-39 seq481 178 1e-39 seq436 178 1e-39 seq562 168 7e-37 seq426 152 5e-32 seq403 149 7e-31 seq875 147 2e-30 seq602 147 2e-30 seq388 145 8e-30 seq643 143 3e-29 seq605 143 3e-29 seq919 141 1e-28 seq31 141 1e-28 seq497 138 1e-27 seq443 134 1e-26 seq416 134 1e-26 seq951 125 7e-24 seq514 125 7e-24 seq555 111 2e-19 seq129 107 2e-18 seq312 87.8 2e-12 seq219 87.8 2e-12 seq55 87.8 2e-12 seq174 84.2 2e-11 seq1 84.2 2e-11 seq243 82.4 8e-11 seq80 82.4 8e-11 >seq574 Length=38332 Score = 288 bits (318), Expect = 1e-72 Identities = 231/274 (84%), Gaps = 6/274 (2%) Strand=Plus/Minus Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403 ||||||||| | || |||| || ||||||||| ||||| |||||||| || ||||| Sbjct 1486 TCTCACTCTTTCGC--AGGCCAGACTGCAGTGGCGGGATCTTGGCTCACTGGAAGCTCCG 1429 Query 8404 CCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAA 8463 ||||| ||||||| || ||||||||||||||| |||| |||||| ||||| ||||||| Sbjct 1428 CCTCCTGGGTTCACGCCATTCTCCTGCCTCAGTCTCCCGAGTAG-TGGGACTACAGGCGC 1370 Query 8464 AAGCCACCACGCCAAGCTAA-TTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTG 8522 ||||||| ||| |||||| ||||||||||||||||||||| ||||||||| |||| Sbjct 1369 CCGCCACCATGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACTGTGTTA 1310 Query 8523 GCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTG 8582 |||||| |||||| || ||||||||||| |||||| || ||||| ||||||||||||| Sbjct 1309 GCCAGGATGGTCTTGATCTCCTGACCTC--GTGATCTGCCCGCCTCAGCCTCCCAAAGTG 1252 Query 8583 CTGGGATTACAGGCATGAGCCACCGCGCCTGGCC 8616 |||||||||||||| |||||||||||||| |||| Sbjct 1251 CTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC 1218 Score = 93.3 bits (102), Expect = 4e-14 Identities = 95/123 (77%), Gaps = 1/123 (1%) Strand=Plus/Minus Query 8484 TTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCC 8543 ||||| | ||| | ||||||| |||| |||| |||||| |||| ||||||||||||||| Sbjct 1137 TTTTTTTTTTTNTGGTAGAGACGGGGTCTCACTATGTTGCCCAG-CTGGTCTCGAACTCC 1079 Query 8544 TGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCC 8603 || ||||| | ||| | |||| | |||||||||| || | | ||||||||||| Sbjct 1078 TGGCCTCAAGCAATCTTCTCACCTCAGGTTCCCAAAGTGTTGTGGTGGTAGGCATGAGCC 1019 Query 8604 ACC 8606 ||| Sbjct 1018 ACC 1016 >seq297 Length=62275575 Score = 224 bits (248), Expect = 1e-53 Identities = 408/597 (68%), Gaps = 0/597 (0%) Strand=Plus/Minus Query 23496 CTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATT 23555 ||| |||| | || ||||| ||||| || || || ||||| || ||||| | |||||| Sbjct 25392587 CTTGAACATCAGGCAGGCAAAGTCACAGTGCAGACCCTCATCTCTGCTAATAAGTTCATT 25392528 Query 23556 AGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGA 23615 |||||||| | || ||||| | ||| ||||| || | ||| ||||||| ||||| || Sbjct 25392527 GGAAAATGTAAGGCCCGGCATCAGTCCCCGTTTCTTGAGCCAGAATATTGATGCAAAAGA 25392468 Query 23616 TCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGC 23675 || |||||||| || || || || || || |||||||||| ||| ||| | || || Sbjct 25392467 ACCAGAAAAGAAGATTCCTTCTACCGCAGCGAAGGCCACAACTCGTTCTCCATACGTAGC 25392408 Query 23676 ATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGT 23735 | | || |||||| | ||| | ||||||| || ||||| ||||| Sbjct 25392407 CTCTTTGTCCCCAATCCAACGCAAGGCCCAGTCAGCCTTCTTCTTCACACAAGGCATTGT 25392348 Query 23736 TTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAG 23795 ||||| || || |||||| | | |||||| |||| | || || || ||||| || Sbjct 25392347 CTCAATGGCGTTGAAGAGATATTCTCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAG 25392288 Query 23796 TAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCT 23855 | ||| |||||||| || || || || || || ||||| || || ||||| ||||| | Sbjct 25392287 GAGACTGTACATTTCGGAGTGTATGTTCTCCATGGCAATTTGGAAGCCATAGAAACAGCG 25392228 Query 23856 AGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACC 23915 || || | | |||||| || | ||||| | | || || || || || || || Sbjct 25392227 GGCCTCTGTGACTTGAACTTCTTGGCTAAATCGCTCCACCAAGTTCTCATTGACTATGCC 25392168 Query 23916 ATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAA 23975 |||||| || |||||||| || ||||||| |||||||||||| ||||| | | | Sbjct 25392167 ATCACTCGCCGCAAAGAAGGCCAGAACATGAGATATAAAATGTCTCTCATCTGGTTTCAG 25392108 Query 23976 TTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGC 24035 || ||| | | |||||| || || | || || || || | |||||||| || Sbjct 25392107 AGCTTCCCAGTGCTGAATATCCTTGGAAAGGTCCACCTCCTCGGCAGTCCAAAAGGAGGC 25392048 Query 24036 CAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAA 24092 | || ||| ||||| |||| ||||||| | || || ||||| | ||||| Sbjct 25392047 CTCAGCTTTCTTGTACATCTGCCAGATATCATGGTATTCGATGGGAAAGACAACGAA 25391991 Score = 82.4 bits (90), Expect = 8e-11 Identities = 89/117 (76%), Gaps = 11/117 (9%) Strand=Plus/Minus Query 8490 TATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCT 8549 ||||||| | |||| |||||||| | ||| | ||||||||||||||||||| Sbjct 54734874 TATTTTTGTTCGAGACAGGGTTTCCTC-TGTGGACCAGGCTGGTCTCGAACTCA------ 54734822 Query 8550 CATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACC 8606 | ||||||| |||| ||||||||| |||||||||||| ||||||| ||| || Sbjct 54734821 ---GAGATCCACTCCCCTCTGCCTCCCAA-GTGCTGGGATTAAAGGCATGCGCCGCC 54734769 >seq954 Length=5301 Score = 178 bits (196), Expect = 1e-39 Identities = 119/133 (89%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 8484 TTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCC 8543 ||||| | ||||||||||||| |||||||||||||||| ||||| ||||||||||||| Sbjct 3086 TTTTTTTTTTTTTAGTAGAGATGGGGTTTCACCATGTTGCTCAGGCAGGTCTCGAACTCC 3027 Query 8544 TGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCC 8603 |||||||| |||||||||| ||| |||||||||||||||||||||||||||| |||||| Sbjct 3026 TGACCTCAGGTGATCCACCCCCCTGGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCC 2967 Query 8604 ACCGCGCCTGGCC 8616 | |||||||||| Sbjct 2966 ATTGCGCCTGGCC 2954 >seq731 Length=21210 Score = 178 bits (196), Expect = 1e-39 Identities = 119/133 (89%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 8484 TTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCC 8543 ||||| | ||||||||||||| |||||||||||||||| ||||| ||||||||||||| Sbjct 5754 TTTTTTTTTTTTTAGTAGAGATGGGGTTTCACCATGTTGCTCAGGCAGGTCTCGAACTCC 5695 Query 8544 TGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCC 8603 |||||||| |||||||||| ||| |||||||||||||||||||||||||||| |||||| Sbjct 5694 TGACCTCAGGTGATCCACCCCCCTGGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCC 5635 Query 8604 ACCGCGCCTGGCC 8616 | |||||||||| Sbjct 5634 ATTGCGCCTGGCC 5622 >seq710 Length=3168 Score = 178 bits (196), Expect = 1e-39 Identities = 119/133 (89%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 8484 TTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCC 8543 ||||| | ||||||||||||| |||||||||||||||| ||||| ||||||||||||| Sbjct 3158 TTTTTTTTTTTTTAGTAGAGATGGGGTTTCACCATGTTGCTCAGGCAGGTCTCGAACTCC 3099 Query 8544 TGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCC 8603 |||||||| |||||||||| ||| |||||||||||||||||||||||||||| |||||| Sbjct 3098 TGACCTCAGGTGATCCACCCCCCTGGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCC 3039 Query 8604 ACCGCGCCTGGCC 8616 | |||||||||| Sbjct 3038 ATTGCGCCTGGCC 3026 >seq498 Length=1998 Score = 178 bits (196), Expect = 1e-39 Identities = 119/133 (89%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 8484 TTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCC 8543 ||||| | ||||||||||||| |||||||||||||||| ||||| ||||||||||||| Sbjct 1136 TTTTTTTTTTTTTAGTAGAGATGGGGTTTCACCATGTTGCTCAGGCAGGTCTCGAACTCC 1077 Query 8544 TGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCC 8603 |||||||| |||||||||| ||| |||||||||||||||||||||||||||| |||||| Sbjct 1076 TGACCTCAGGTGATCCACCCCCCTGGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCC 1017 Query 8604 ACCGCGCCTGGCC 8616 | |||||||||| Sbjct 1016 ATTGCGCCTGGCC 1004 >seq481 Length=3210 Score = 178 bits (196), Expect = 1e-39 Identities = 119/133 (89%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 8484 TTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCC 8543 ||||| | ||||||||||||| |||||||||||||||| ||||| ||||||||||||| Sbjct 3066 TTTTTTTTTTTTTAGTAGAGATGGGGTTTCACCATGTTGCTCAGGCAGGTCTCGAACTCC 3007 Query 8544 TGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCC 8603 |||||||| |||||||||| ||| |||||||||||||||||||||||||||| |||||| Sbjct 3006 TGACCTCAGGTGATCCACCCCCCTGGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCC 2947 Query 8604 ACCGCGCCTGGCC 8616 | |||||||||| Sbjct 2946 ATTGCGCCTGGCC 2934 >seq436 Length=2858 Score = 178 bits (196), Expect = 1e-39 Identities = 119/133 (89%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 8484 TTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCC 8543 ||||| | ||||||||||||| |||||||||||||||| ||||| ||||||||||||| Sbjct 1136 TTTTTTTTTTTTTAGTAGAGATGGGGTTTCACCATGTTGCTCAGGCAGGTCTCGAACTCC 1077 Query 8544 TGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCC 8603 |||||||| |||||||||| ||| |||||||||||||||||||||||||||| |||||| Sbjct 1076 TGACCTCAGGTGATCCACCCCCCTGGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCC 1017 Query 8604 ACCGCGCCTGGCC 8616 | |||||||||| Sbjct 1016 ATTGCGCCTGGCC 1004 >seq562 Length=1138 Score = 168 bits (186), Expect = 7e-37 Identities = 118/133 (89%), Gaps = 1/133 (1%) Strand=Plus/Plus Query 8484 TTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCC 8543 ||||| | |||||| |||||| |||||||||||||||| ||||| ||||||||||||| Sbjct 4 TTTTTTTTTTTTTA-TAGAGATGGGGTTTCACCATGTTGCTCAGGCAGGTCTCGAACTCC 62 Query 8544 TGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCC 8603 |||||||| |||||||||| ||| |||||||||||||||||||||||||||| |||||| Sbjct 63 TGACCTCAGGTGATCCACCCCCCTGGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCC 122 Query 8604 ACCGCGCCTGGCC 8616 | |||||||||| Sbjct 123 ATTGCGCCTGGCC 135 >seq426 Length=5537 Score = 152 bits (168), Expect = 5e-32 Identities = 102/113 (90%), Gaps = 3/113 (3%) Strand=Plus/Minus Query 8352 TGTTGCCCAGGCTGGAGTGCAGTGGCCTGA---TCTCCGCTCACTGCAACCTCCGCCTCC 8408 ||||||||||||||||||||||||| ||| |||| |||||||||||||||| ||||| Sbjct 113 TGTTGCCCAGGCTGGAGTGCAGTGGTGTGAAGATCTCGGCTCACTGCAACCTCCACCTCC 54 Query 8409 CGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGC 8461 | |||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 53 CAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGC 1 Score = 143 bits (158), Expect = 3e-29 Identities = 103/119 (87%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403 |||| |||||| |||||| |||||||||||||| |||| ||||||||||| |||| Sbjct 565 TCTCTCTCTGTCGCCCAGTCTGGAGTGCAGTGGTGCAGTCTCGGCTCACTGCAAGCTCCA 624 Query 8404 CCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCA 8462 ||||| ||||||| || |||||||||||||||||||| |||||||||||| |||||||| Sbjct 625 CCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCA 683 >seq403 Length=34391 Score = 149 bits (164), Expect = 7e-31 Identities = 97/107 (91%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 8510 TTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCG 8569 ||||||||||||| ||||| ||||||||||||||||||||| |||||||||| ||| | Sbjct 24475 TTTCACCATGTTGCTCAGGCAGGTCTCGAACTCCTGACCTCAGGTGATCCACCCCCCTGG 24416 Query 8570 GCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCC 8616 ||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct 24415 GCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCATTGCGCCTGGCC 24369 >seq875 Length=5093 Score = 147 bits (162), Expect = 2e-30 Identities = 96/106 (91%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 8511 TTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGG 8570 |||||||||||| ||||| ||||||||||||||||||||| |||||||||| ||| || Sbjct 1746 TTCACCATGTTGCTCAGGCAGGTCTCGAACTCCTGACCTCAGGTGATCCACCCCCCTGGG 1687 Query 8571 CCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCC 8616 |||||||||||||||||||||||||| ||||||| |||||||||| Sbjct 1686 CCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCATTGCGCCTGGCC 1641 >seq602 Length=1106 Score = 147 bits (162), Expect = 2e-30 Identities = 96/106 (91%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 8511 TTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGG 8570 |||||||||||| ||||| ||||||||||||||||||||| |||||||||| ||| || Sbjct 1106 TTCACCATGTTGCTCAGGCAGGTCTCGAACTCCTGACCTCAGGTGATCCACCCCCCTGGG 1047 Query 8571 CCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCC 8616 |||||||||||||||||||||||||| ||||||| |||||||||| Sbjct 1046 CCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCATTGCGCCTGGCC 1001 >seq388 Length=21235 Score = 145 bits (160), Expect = 8e-30 Identities = 95/105 (90%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 8512 TCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGC 8571 ||||||||||| ||||| ||||||||||||||||||||| |||||||||| ||| ||| Sbjct 21235 TCACCATGTTGCTCAGGCAGGTCTCGAACTCCTGACCTCAGGTGATCCACCCCCCTGGGC 21176 Query 8572 CTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCC 8616 ||||||||||||||||||||||||| ||||||| |||||||||| Sbjct 21175 CTCCCAAAGTGCTGGGATTACAGGCGTGAGCCATTGCGCCTGGCC 21131 >seq643 Length=1106 Score = 143 bits (158), Expect = 3e-29 Identities = 94/104 (90%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 8513 CACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCC 8572 |||||||||| ||||| ||||||||||||||||||||| |||||||||| ||| |||| Sbjct 1 CACCATGTTGCTCAGGCAGGTCTCGAACTCCTGACCTCAGGTGATCCACCCCCCTGGGCC 60 Query 8573 TCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCC 8616 |||||||||||||||||||||||| ||||||| |||||||||| Sbjct 61 TCCCAAAGTGCTGGGATTACAGGCGTGAGCCATTGCGCCTGGCC 104 >seq605 Length=5919 Score = 143 bits (158), Expect = 3e-29 Identities = 94/104 (90%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 8513 CACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCC 8572 |||||||||| ||||| ||||||||||||||||||||| |||||||||| ||| |||| Sbjct 1 CACCATGTTGCTCAGGCAGGTCTCGAACTCCTGACCTCAGGTGATCCACCCCCCTGGGCC 60 Query 8573 TCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCC 8616 |||||||||||||||||||||||| ||||||| |||||||||| Sbjct 61 TCCCAAAGTGCTGGGATTACAGGCGTGAGCCATTGCGCCTGGCC 104 >seq919 Length=2344 Score = 141 bits (156), Expect = 1e-28 Identities = 93/103 (90%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 8514 ACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCT 8573 ||||||||| ||||| ||||||||||||||||||||| |||||||||| ||| ||||| Sbjct 2344 ACCATGTTGCTCAGGCAGGTCTCGAACTCCTGACCTCAGGTGATCCACCCCCCTGGGCCT 2285 Query 8574 CCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCC 8616 ||||||||||||||||||||||| ||||||| |||||||||| Sbjct 2284 CCCAAAGTGCTGGGATTACAGGCGTGAGCCATTGCGCCTGGCC 2242 >seq31 Length=266435125 Score = 141 bits (156), Expect = 1e-28 Identities = 93/103 (90%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 8514 ACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCT 8573 ||||||||| ||||| ||||||||||||||||||||| |||||||||| ||| ||||| Sbjct 114565506 ACCATGTTGCTCAGGCAGGTCTCGAACTCCTGACCTCAGGTGATCCACCCCCCTGGGCCT 114565565 Query 8574 CCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCC 8616 ||||||||||||||||||||||| ||||||| |||||||||| Sbjct 114565566 CCCAAAGTGCTGGGATTACAGGCGTGAGCCATTGCGCCTGGCC 114565608 Score = 82.4 bits (90), Expect = 8e-11 Identities = 90/120 (75%), Gaps = 10/120 (8%) Strand=Plus/Plus Query 8512 TCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGC 8571 ||||| ||| | ||||||||| || |||||| | ||||||||||| | | Sbjct 28162597 TCACCCTGTAGACCAGGCTGGCCTGGAACTCATA---------GATCCACCTGCAGCTGT 28162647 Query 8572 CTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCCCTTTAAAAAGTTTTC 8631 |||| | ||||||||||||| |||||||||||||| | || | || |||||||||||| Sbjct 28162648 CTCC-AGAGTGCTGGGATTAGAGGCATGAGCCACCACTCCCAGTTCTCTAAAAAGTTTTC 28162706 >seq497 Length=1724 Score = 138 bits (152), Expect = 1e-27 Identities = 91/101 (90%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 8516 CATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCC 8575 ||||||| ||||| ||||||||||||||||||||| |||||||||| ||| ||||||| Sbjct 1 CATGTTGCTCAGGCAGGTCTCGAACTCCTGACCTCAGGTGATCCACCCCCCTGGGCCTCC 60 Query 8576 CAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCC 8616 ||||||||||||||||||||| ||||||| |||||||||| Sbjct 61 CAAAGTGCTGGGATTACAGGCGTGAGCCATTGCGCCTGGCC 101 >seq443 Length=2985 Score = 134 bits (148), Expect = 1e-26 Identities = 89/99 (90%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 8518 TGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCA 8577 ||||| ||||| ||||||||||||||||||||| |||||||||| ||| ||||||||| Sbjct 1927 TGTTGCTCAGGCAGGTCTCGAACTCCTGACCTCAGGTGATCCACCCCCCTGGGCCTCCCA 1986 Query 8578 AAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCC 8616 ||||||||||||||||||| ||||||| |||||||||| Sbjct 1987 AAGTGCTGGGATTACAGGCGTGAGCCATTGCGCCTGGCC 2025 >seq416 Length=1063 Score = 134 bits (148), Expect = 1e-26 Identities = 91/102 (89%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 8515 CCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTC 8574 |||||||| ||||| ||||||||||||||||||||| |||||||||| ||| |||||| Sbjct 1063 CCATGTTGCTCAGGCAGGTCTCGAACTCCTGACCTCAGGTGATCCACCCCCCTGGGCCTC 1004 Query 8575 CCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCC 8616 ||| |||||||||||||||||| ||||||| |||||||||| Sbjct 1003 CCATAGTGCTGGGATTACAGGCGTGAGCCATTGCGCCTGGCC 962 >seq951 Length=2232 Score = 125 bits (138), Expect = 7e-24 Identities = 88/99 (89%), Gaps = 1/99 (1%) Strand=Plus/Plus Query 8518 TGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCA 8577 ||||| ||||| ||||||||||||||||||||| |||||||||| ||| |||||||| Sbjct 1 TGTTGCTCAGGCAGGTCTCGAACTCCTGACCTCAGGTGATCCACCCCCCTGGGCCTCCC- 59 Query 8578 AAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCC 8616 ||||||||||||||||||| ||||||| |||||||||| Sbjct 60 AAGTGCTGGGATTACAGGCGTGAGCCATTGCGCCTGGCC 98 >seq514 Length=4854 Score = 125 bits (138), Expect = 7e-24 Identities = 91/104 (88%), Gaps = 1/104 (1%) Strand=Plus/Minus Query 8514 ACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCT 8573 ||||||||| ||||| ||||||||||||||||||||| |||||||||| ||| ||||| Sbjct 4283 ACCATGTTGCTCAGGCAGGTCTCGAACTCCTGACCTCAGGTGATCCACCCCCCTGGGCCT 4224 Query 8574 CCC-AAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCC 8616 ||| || |||||||||||||||| ||||||| |||||||||| Sbjct 4223 CCCTTAAATGCTGGGATTACAGGCGTGAGCCATTGCGCCTGGCC 4180 >seq555 Length=48841 Score = 111 bits (122), Expect = 2e-19 Identities = 84/99 (85%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 8518 TGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCA 8577 ||||| ||||| ||||||||||||||||||||| |||||||||| ||| |||||||| Sbjct 21662 TGTTGCTCAGGCAGGTCTCGAACTCCTGACCTCAGGTGATCCACCCCCCTGGGCCTCCCC 21721 Query 8578 AAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCC 8616 || ||||||||||||| ||||||| |||||||||| Sbjct 21722 TTTTGATGGGATTACAGGCGTGAGCCATTGCGCCTGGCC 21760 >seq129 Length=145729302 Score = 107 bits (118), Expect = 2e-18 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590 |||||||||| || |||| |||||| ||||| || | || ||||| | |||| || | Sbjct 76759204 CTTCATCCCTGCTGATCAGTTCATTTGAAAAAGTCAGCCCAGGCATGAGGCCTCTCTTCT 76759263 Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650 | | ||| ||||| |||||||||||||| || |||||||| || || ||||| || |||| Sbjct 76759264 TTAGCCAGAATATAGCAGCAAATGATCCAGAGAAGAAAATCCCTTCTACAGCAGCGAAGG 76759323 Query 23651 CCAC 23654 |||| Sbjct 76759324 CCAC 76759327 >seq312 Length=159970021 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/104 (81%), Gaps = 9/104 (9%) Strand=Plus/Minus Query 8518 TGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCA 8577 ||| | ||||||||| ||| ||||| || | ||||| |||||||| |||||||| Sbjct 36969905 TGTAGACCAGGCTGGCCTCAAACTCA------CA-GAGATCCTCCTGCCTCTGCCTCCCA 36969853 Query 8578 AAGTGCTGGGATTACAGGCATGAGCCACCGC-GCCTGGCCCTTT 8620 | ||||||||||||||||||||| ||||| | |||||||| ||| Sbjct 36969852 A-GTGCTGGGATTACAGGCATGAACCACCACTGCCTGGCCATTT 36969810 Score = 82.4 bits (90), Expect = 8e-11 Identities = 60/67 (90%), Gaps = 2/67 (3%) Strand=Plus/Minus Query 8555 GATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGC-GCCTG 8613 |||||||||||||| ||||||||| |||||||||||||||||||| ||||| | ||||| Sbjct 11410554 GATCCACCTGCCTCTGCCTCCCAA-GTGCTGGGATTACAGGCATGCGCCACTACTGCCTG 11410496 Query 8614 GCCCTTT 8620 ||| ||| Sbjct 11410495 GCCTTTT 11410489 Score = 82.4 bits (90), Expect = 8e-11 Identities = 105/138 (76%), Gaps = 15/138 (11%) Strand=Plus/Plus Query 8484 TTTTT--GTATTTTTAGTAGAGAGAGGGTTTCACCATGTTG--GCCAGGCTGGTCTCGAA 8539 ||||| || |||| || | ||| |||||||||| |||| | | |||||||| |||||| Sbjct 15688183 TTTTTAGGTGTTTTGAG-ACAGACAGGGTTTCACTATGTAGAAGACAGGCTGGCCTCGAA 15688241 Query 8540 CTC-CTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCAT 8598 ||| | ||| || || |||||||| || |||||| |||||||||||| ||| | Sbjct 15688242 CTCACAGACATCCTG-------CCTGCCTCTGCTTCCCAA-GTGCTGGGATTAAAGGTGT 15688293 Query 8599 GAGCCACCGC-GCCTGGC 8615 | |||||| | ||||||| Sbjct 15688294 GTGCCACCACTGCCTGGC 15688311 >seq219 Length=114033958 Score = 87.8 bits (96), Expect = 2e-12 Identities = 108/144 (75%), Gaps = 9/144 (6%) Strand=Plus/Minus Query 8484 TTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCC 8543 ||||| | ||||| | |||| | ||| |||| || ||| || ||||| || |||||| Sbjct 97804729 TTTTTTTTTTTTTTTTTGAGACACGGTCTCACTAT-TTGCCCTGGCTGTCCTAGAACTCA 97804671 Query 8544 TGACCT----CA---TGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGC 8596 |||| || || |||||||||||||| || |||| || ||||||| ||| |||| Sbjct 97804670 CTACCTAGACCAGGCTGAGATCCACCTGCCTCTGCTTCCC-AACTGCTGGGGTTAAAGGC 97804612 Query 8597 ATGAGCCACCGCGCCTGGCCCTTT 8620 ||| |||||| ||||||| |||| Sbjct 97804611 ATGTGCCACCATGCCTGGCTCTTT 97804588 >seq55 Length=177699992 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 10/113 (9%) Strand=Plus/Minus Query 8510 TTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCG 8569 |||| | ||| | ||||||||| ||||||||| | |||||||||||||| Sbjct 55918029 TTTCTCTGTGTGGACCAGGCTGGCCTCGAACTCA---------GAGATCCACCTGCCTCT 55917979 Query 8570 GCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCCCTTTAA 8622 ||||| ||| ||||||||| || ||| || |||||| ||||||||||||||| Sbjct 55917978 GCCTCTCAA-GTGCTGGGAGTAAAGGTCTGCGCCACCACGCCTGGCCCTTTAA 55917927 >seq174 Length=112626471 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/134 (75%), Gaps = 9/134 (7%) Strand=Plus/Plus Query 8500 AGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCC 8559 ||||| ||||| | |||||| | ||||||||| || |||||| | |||| Sbjct 66381188 AGAGATAGGGTCTTACCATGCAGACCAGGCTGGCCTTGAACTCACAAA-------GATCT 66381240 Query 8560 ACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCCCTT 8619 ||||||||| | ||| ||| |||||| ||||| |||||||||||||| |||| | |||| Sbjct 66381241 ACCTGCCTCTGACTCTCAA-GTGCTGAGATTAAAGGCATGAGCCACCATGCCT-GACCTT 66381298 Query 8620 TAAAAAGTTTTCTT 8633 || || |||||| Sbjct 66381299 AGAAGAGATTTCTT 66381312 >seq1 Length=282763074 Score = 84.2 bits (92), Expect = 2e-11 Identities = 76/92 (83%), Gaps = 9/92 (10%) Strand=Plus/Plus Query 8525 CAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCT 8584 |||||||||||| ||||| || || ||||||||||| || |||||| | |||||| Sbjct 72973860 CAGGCTGGTCTCAAACTC---AC----TGAGATCCACCTGCTTCTGCCTCC-AGAGTGCT 72973911 Query 8585 GGGATTACAGGCATGAGCCACCGC-GCCTGGC 8615 ||||||| ||||||| |||||||| ||||||| Sbjct 72973912 GGGATTAAAGGCATGTGCCACCGCTGCCTGGC 72973943 >seq243 Length=111246239 Score = 82.4 bits (90), Expect = 8e-11 Identities = 85/108 (79%), Gaps = 9/108 (8%) Strand=Plus/Plus Query 8512 TCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGC 8571 |||| ||| | ||||||| | ||||||||| || | |||||||||||||| || Sbjct 34236497 TCACTCTGTAGACCAGGCTTGCCTCGAACTCA------CA-GAGATCCACCTGCCTCTGC 34236549 Query 8572 CTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGC-GCCTGGCCCT 8618 |||||||| ||||||||||| ||||||| |||| | |||||||||| Sbjct 34236550 CTCCCAAA-TGCTGGGATTAAAGGCATGCTCCACTACTGCCTGGCCCT 34236596 >seq80 Length=184226339 Score = 82.4 bits (90), Expect = 8e-11 Identities = 111/153 (73%), Gaps = 9/153 (6%) Strand=Plus/Minus Query 8421 ATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCCACCACGCCAAGC 8480 || |||||||||||||||| |||| |||| ||||||| ||| | |||||| ||| || Sbjct 99194648 ATCCTCCTGCCTCAGCCTCTTGAGT-GCTGAGATTACATACAAGAACCACCATGCCTGGC 99194590 Query 8481 TAATTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAAC 8540 | ||| ||||||| || | || |||||| | ||| ||| | |||| ||| Sbjct 99194589 TTATT----TATTTTT----GAAACAGTATTTCACTACATTGTACAGACAACTCTCAAAC 99194538 Query 8541 TCCTGACCTCATGTGATCCACCTGCCTCGGCCT 8573 | | | |||| ||||||| |||||||| |||| Sbjct 99194537 TTATAAGCTCAAGTGATCCTCCTGCCTCAGCCT 99194505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521481774737000