Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rattus_20norvegicus_20[refseq_20GCF_5F000001895.5_202014-07-01] 955 sequences; 2,870,184,193 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq174 134 1e-26 seq206 131 2e-25 seq232 122 8e-23 seq219 122 8e-23 seq97 122 8e-23 seq297 111 1e-19 seq243 98.7 9e-16 seq80 93.3 4e-14 seq154 89.7 5e-13 seq312 84.2 2e-11 >seq174 Length=112626471 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| | || || | ||||| ||||| || ||||||||| ||||| ||||| || Sbjct 48881513 GCCGCCCCTCAGGCGGAGGACCAGGTGCAGGGTTGACTCCTTCTGGATGTTGTAGTCAGA 48881454 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||||||| | || || |||||||||||||| || || || | ||| ||||| | ||| Sbjct 48881453 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGG 48881394 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 | || ||| || ||| ||| || ||||| | | ||||| || | |||||| Sbjct 48881393 GATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCAC 48881334 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || || || || || ||||| ||||| ||||| ||||||||| Sbjct 48881333 CTCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATG 48881285 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| || ||| ||||| ||||| || || ||||||||||| | || || Sbjct 48881722 ACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCTTCC 48881663 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||||||||| || || || | ||| ||||| | ||| | || ||| || ||| | Sbjct 48881662 AGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGG 48881603 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||||| | | ||||| || | ||||||||||| || || || || Sbjct 48881602 ATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 48881543 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||| ||||| ||||| ||||||||| Sbjct 48881542 CCGGTCAGGGTCTTCACGAAGATCTGCATG 48881513 Score = 114 bits (126), Expect = 1e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| | || || | ||||| ||||| || ||| ||||| ||||| || || || Sbjct 49699195 GCCGCCCCTCAGGCGGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGA 49699254 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||||||| | || || |||||||||||||| || || || | ||| ||||| | ||| Sbjct 49699255 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGG 49699314 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 | || ||| || ||| ||| || ||||| | | ||||| || | |||||| Sbjct 49699315 GATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCAC 49699374 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC-GAAAATCTGCATGTT 41865 ||||| || || || || || ||||| ||||| || || ||| ||||| || Sbjct 49699375 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAGAGAAT-TGCATTTT 49699425 Score = 93.3 bits (102), Expect = 4e-14 Identities = 155/214 (72%), Gaps = 10/214 (5%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| |||| |||||| |||| || || ||||||||||| | || ||| Sbjct 48881267 ACCAGGTGCAGTTGACTCT--TTCTGA-TGTTGTAATCAGAGAGGGTGCGGCCATCTTCG 48881211 Query 41714 -AGCTGCTT-GCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCA 41771 |||||||| |||||| || || || | ||| ||||| ||| | || ||| || ||| Sbjct 48881210 CAGCTGCTTTGCCGGCAAAGAT-AGCCTCTGCTGGTCATGGGGGATGCCCTC-TTATCCT 48881153 Query 41772 TGATTTTTTGCTTCAACGACGACACA--GTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| || || ||| ||| || ||||| || | ||||||||||| | || || Sbjct 48881152 GGATCTTG-GCCTCACTCACGTTTCATGGTGTCACTGGGCTCCACCTCCAGGATGATGGT 48881094 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || ||||| ||||| |||| |||||||||| Sbjct 48881093 CTTGCCGGTCAGGGTCTTCACGAGAATCTGCATG 48881060 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/213 (71%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| || ||| ||||| ||||| ||||| ||||||||||| | || || Sbjct 48881043 ACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCC 48880984 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || || || | ||| ||||| | ||| | || ||| | ||| | Sbjct 48880983 AGCTGCTTGCC-GCAAAGATGAGCCTCTGCTGGTCAG-GGGGATGCCCTCTTAATCC--G 48880928 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCT-CGACTCCACCTCCACCGTTATCGTTTT 41832 | || |||||| | | ||||| || | ||||||| | || || || || Sbjct 48880927 GATCTTGGCTTCACGTTCTCGATGGTGTCACTGGGGGCCCACCTCTAGGGTGATGGTCTT 48880868 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||||||| ||||| ||||| || ||||| || Sbjct 48880867 GCCCGTCAGGGTCTTCACGAAGATTTGCATTTT 48880835 >seq206 Length=52716770 Score = 131 bits (144), Expect = 2e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||||||||| ||||| ||||| || |||||||| | || || Sbjct 36641343 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATCTTCC 36641284 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || ||||| | ||| ||||| | ||| | || |||||||||| | Sbjct 36641283 AGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 36641224 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || ||| ||| | | ||||| || | ||| ||||||| || || || || Sbjct 36641223 ATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTCTTG 36641164 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||| ||||| || || ||||||||| Sbjct 36641163 CCTGTCAGGGTCTTCACAAAGATCTGCATG 36641134 Score = 131 bits (144), Expect = 2e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||||||||| ||||| ||||| || |||||||| | || || Sbjct 36641571 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 36641512 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || ||||| | ||| ||||| | ||| | || |||||||||| | Sbjct 36641511 AGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 36641452 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || ||| ||| | | ||||| || | ||| ||||||| || || || || Sbjct 36641451 ATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTCTTG 36641392 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||| ||||| || || ||||||||| Sbjct 36641391 CCTGTCAGGGTCTTCACAAAGATCTGCATG 36641362 Score = 131 bits (144), Expect = 2e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||||||||| ||||| ||||| || |||||||| | || || Sbjct 36642027 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 36641968 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || ||||| | ||| ||||| | ||| | || |||||||||| | Sbjct 36641967 AGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 36641908 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || ||| ||| | | ||||| || | ||| ||||||| || || || || Sbjct 36641907 ATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTCTTG 36641848 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||| ||||| || || ||||||||| Sbjct 36641847 CCTGTCAGGGTCTTCACAAAGATCTGCATG 36641818 Score = 131 bits (144), Expect = 2e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||||||||| ||||| ||||| || |||||||| | || || Sbjct 36642255 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATCTTCC 36642196 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || ||||| | ||| ||||| | ||| | || |||||||||| | Sbjct 36642195 AGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 36642136 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || ||| ||| | | ||||| || | ||| ||||||| || || || || Sbjct 36642135 ATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTCTTG 36642076 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||| ||||| || || ||||||||| Sbjct 36642075 CCTGTCAGGGTCTTCACAAAGATCTGCATG 36642046 Score = 131 bits (144), Expect = 2e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||||||||| ||||| ||||| || |||||||| | || || Sbjct 36642483 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATCTTCC 36642424 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || ||||| | ||| ||||| | ||| | || |||||||||| | Sbjct 36642423 AGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 36642364 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || ||| ||| | | ||||| || | ||| ||||||| || || || || Sbjct 36642363 ATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTCTTG 36642304 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||| ||||| || || ||||||||| Sbjct 36642303 CCTGTCAGGGTCTTCACAAAGATCTGCATG 36642274 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| |||| ||| ||||||||| ||||| ||||| || |||||||| | || || Sbjct 36640659 ACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATCTTCC 36640600 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || ||||| | ||| ||||| | ||| | || |||||||||| | Sbjct 36640599 AGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 36640540 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || ||| ||| | | ||||| || | ||| ||||||| || || || || Sbjct 36640539 ATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTCTTG 36640480 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||| ||||| || || ||||||||| Sbjct 36640479 CCTGTCAGGGTCTTCACAAAGATCTGCATG 36640450 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| |||| ||| ||||||||| ||||| ||||| || |||||||| | || || Sbjct 36640887 ACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATCTTCC 36640828 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || ||||| | ||| ||||| | ||| | || |||||||||| | Sbjct 36640827 AGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 36640768 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || ||| ||| | | ||||| || | ||| ||||||| || || || || Sbjct 36640767 ATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTCTTG 36640708 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||| ||||| || || ||||||||| Sbjct 36640707 CCTGTCAGGGTCTTCACAAAGATCTGCATG 36640678 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||||||||| ||||| || || || |||||||| | || || Sbjct 36641115 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCTGACAGGGTGCGGCCATCTTCC 36641056 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || ||||| | ||| ||||| | ||| | || |||||||||| | Sbjct 36641055 AGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 36640996 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || ||| ||| | | ||||| || | ||| ||||||| || || || || Sbjct 36640995 ATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTCTTG 36640936 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||| ||||| || || ||||||||| Sbjct 36640935 CCTGTCAGGGTCTTCACAAAGATCTGCATG 36640906 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| |||| ||| ||||||||| ||||| ||||| || |||||||| | || || Sbjct 36641799 ACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATCTTCC 36641740 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || ||||| | ||| ||||| | ||| | || |||||||||| | Sbjct 36641739 AGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 36641680 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || ||| ||| | | ||||| || | ||| ||||||| || || || || Sbjct 36641679 ATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTCTTG 36641620 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||| ||||| || || ||||||||| Sbjct 36641619 CCTGTCAGGGTCTTCACAAAGATCTGCATG 36641590 Score = 116 bits (128), Expect = 3e-21 Identities = 159/221 (72%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| |||| ||| ||||||||| ||||| ||||| || |||||||| | || || Sbjct 36640431 ACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATCTTCC 36640372 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || ||||| | ||| ||||| | ||| | || |||||||||| | Sbjct 36640371 AGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 36640312 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || ||| ||| | | ||||| || | ||| ||||||| || || || ||| Sbjct 36640311 ATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTCTTA 36640252 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATGTTATCGATGGA 41874 || || | || || || || ||||||| || || ||||| Sbjct 36640251 CCAGTTAAGGTTTTCACAAAGATCTGCA--TTGTCTATGGA 36640213 >seq232 Length=115493446 Score = 122 bits (134), Expect = 8e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| || ||||| ||| ||| | || || ||||||||||| | || || Sbjct 36866018 ACCAGGTGCAGGGTTGACTCCTCCTGGATGCTGTAATCAGAGAGGGTGCGGCCATCTTCC 36865959 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||||||||| || || || | ||| ||||| | ||| | ||||||||| ||| | Sbjct 36865958 AGCTGCTTGCCGGCAAAAATGAGCCTCTGCTGGTCAGGGGGGATGCTCTCCTTATCCTGG 36865899 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||||| | | ||||| || | ||||||||| | || || || || Sbjct 36865898 ATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCTAGGGTGATGGTCTTG 36865839 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || ||||| ||||| ||||| || ||||| || Sbjct 36865838 CCGGTCAGGGTCTTCACGAAGATTTGCATTTT 36865807 >seq219 Length=114033958 Score = 122 bits (134), Expect = 8e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || || ||||| || || ||||| ||||| ||||| ||||||||||| | || || Sbjct 14315724 ACTAGGTGCAGGGTTGACTTTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCC 14315783 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||||||||| || || || | ||| ||||| | ||| | || |||||| ||| | Sbjct 14315784 AGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGG 14315843 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||||| | | ||||| || | ||||||||||| || || || || Sbjct 14315844 ATCTTGGCCTTCACGTTCTTGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 14315903 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || ||||| ||||| ||||| || ||||| || Sbjct 14315904 CCGGTCAGGGTCTTCACGAAGATTTGCATTTT 14315935 >seq97 Length=173707219 Score = 122 bits (134), Expect = 8e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| || ||| ||||| ||||| || || ||||||||||| | || || Sbjct 138042938 ACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCTTCC 138042879 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||||||||| || || || | ||| ||||| | ||| | || ||| || ||| | Sbjct 138042878 AGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGG 138042819 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||||| | | ||||| || | ||||||||||| || || || || Sbjct 138042818 ATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 138042759 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || ||||| ||||| ||||| || ||||| || Sbjct 138042758 CCGGTCAGGGTCTTCACGAAGATTTGCATTTT 138042727 >seq297 Length=62275575 Score = 111 bits (122), Expect = 1e-19 Identities = 166/230 (72%), Gaps = 8/230 (3%) Strand=Plus/Plus Query 41639 CCGCGTAGACGTAACACCAGATGCA-GCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAG 41697 |||| ||||| | |||||| |||| | ||| ||| |||| |||| |||||||| || Sbjct 30819919 CCGCAAAGACGCAGCACCAGGTGCAAGGGTGGACTCTCTCTGGGTGTTGTAGTCGGACAG 30819978 Query 41698 GGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAAC 41757 |||||| | || || ||||| |||||||| || ||||| | ||| ||||| | |||| Sbjct 30819979 GGTGCGGCCATCCTCCAGCTGTTTGCCGGCAAAGATCAGTCTCTGCTGGTCAGGGGGACG 30820038 Query 41758 GCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGA-CACAGTG-TCGCTCGACTCCACC 41815 || ||| ||||| ||| || ||| ||| | | || || || ||||| ||| Sbjct 30820039 ACT-TCCATGTCCTGGATCTTGGCCTT----GACATTCTCGATGGTCACTGGACTCGACC 30820093 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || | || || || || ||| |||| ||||| ||||| ||||||||||| Sbjct 30820094 TCAAGAGTGATGGTCTTGCCCATCAGGGTCTTCACGAAGATCTGCATGTT 30820143 >seq243 Length=111246239 Score = 98.7 bits (108), Expect = 9e-16 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| || || | ||||||||||| ||| ||| ||||| ||||| ||| || Sbjct 82529586 GCCACCGCGCAGTCGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGCTGTCAGA 82529527 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| | || || || | ||||| | ||||||||| | ||| ||||| | || Sbjct 82529526 CAGAGTGCGGCCATCCTCCTGCCGTTTGCCAGAGAATATCAGCCTCTGCTGGTCAGGTGG 82529467 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 | || |||||||| ||| || ||||| | | ||||| || | ||| || Sbjct 82529466 GATGCCTTCCTTGTCTTGGATCTTGGCCTTCACTTTCTCAATGGTGTCTCTGGGCTCGAC 82529407 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||| | || || || || ||||||| ||||| ||||| | ||||| ||| Sbjct 82529406 CTCAAGAGTGATGGTCTTGCCCGTCA--GTCTTCACGAAGAACTGCACGTT 82529358 >seq80 Length=184226339 Score = 93.3 bits (102), Expect = 4e-14 Identities = 136/191 (71%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 41675 TTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATC 41734 ||||| |||| ||||| || |||||||| | || || ||||| ||| || |||||||| Sbjct 171061644 TTCTGGATGTCGTAGTCTGACAGGGTGCGGCCATCCTCCAGCTGTTTGTCGTCGAATATC 171061703 Query 41735 AGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC 41794 || | ||| ||||| | |||| ||| |||||||| ||| || ||| | Sbjct 171061704 AGCCTCTGGTGGTCAGGGGGA-CGCCTTCCTTGTCTTGGATCTTGGCCTTGATATTGTCT 171061762 Query 41795 ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAA 41854 | ||||| || | || ||||| | || || || || || ||||| ||||| ||||| Sbjct 171061763 ATGGTGTCACTGGGCTTGACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAG 171061822 Query 41855 ATCTGCATGTT 41865 ||||||||||| Sbjct 171061823 ATCTGCATGTT 171061833 >seq154 Length=133307652 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || |||| ||||| ||||| || ||| || ||| ||||| ||||| |||||||| Sbjct 35423259 CCACCGCACAGACGCAACACTAGGTGCCAGGTAGACTCTTTCTGGATGTTGTAGTCGGAA 35423318 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||| | | || || ||||| |||| |||||||||||| | ||||||||| | || Sbjct 35423319 AGGGTGTGGCCTTCCTCTAGCTGTTTGCTGGCGAATATCAGCCTCTGTTGGTCTGGTGGG 35423378 Query 41756 ACGCTCTCCTTGTC 41769 | | |||||||| Sbjct 35423379 ATTCCTTCCTTGTC 35423392 >seq312 Length=159970021 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/207 (70%), Gaps = 3/207 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| || ||| ||||| ||||| || || ||||||||| | | || || Sbjct 54028838 ACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGAGAGGGTGTGGCCATCTTCC 54028897 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA-ACGCTCTCCTTGTCCAT 41772 ||||||||||| || || || || | ||| ||||| | |||| || |||| || ||| Sbjct 54028898 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGATACCCTCT--TTATCCTG 54028955 Query 41773 GATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 ||| || |||| | | ||||| | | ||||||||||| || || | || Sbjct 54028956 GATCTTGGCATTCATGTTCTCGATGGTGTCATTGGGCTCCACCTCCAGGGTGATGATCTT 54029015 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTG 41859 | ||||| ||||| | ||| ||||| Sbjct 54029016 GCTGGTCAGGGTCTTCAAGAAGATCTG 54029042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462298481246000