Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq688 125 6e-24 >seq688 Length=229267 Score = 125 bits (138), Expect = 6e-24 Identities = 316/473 (67%), Gaps = 7/473 (1%) Strand=Plus/Plus Query 18870 CAAGGAATCGATCAGCTGCAAACTGTTATAGATACAATTAAAACAAACCCAGAAAGCCGA 18929 |||||| | || || ||||||| || | || ||||| ||||| ||| || | || Sbjct 106527 CAAGGAGTAGACCAACTGCAAAAGGTGACTGACACAATCAAAACCAACTGTGATGACAGA 106586 Query 18930 CGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCCTTAATGGTACTACCTCCATGT 18989 |||| || | | ||||||||||| ||| | || ||||||| || |||| || Sbjct 106587 AGAATCATCCTGTGTGGGTGGAATCCAAAAGATCTTCCTTTAATGG--CT-CCTCTCTGC 106643 Query 18990 CACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGA 19049 || | | || ||||| ||| | | ||| ||||| | ||||| || | |||| ||| Sbjct 106644 CATTCCCTTTGCCAGTTCTACCTGGAAAATGGTGAGCTGTCCTGTCAGCTGTACCGGAGC 106703 Query 19050 TCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTAC 19109 || || || |||||||| | || || | || | | | ||||| || || |||||| Sbjct 106704 TCAGGAGACATGGGCCTGGTTGTGCCCTCCAGTGTCACCAGCTATGCCCTGCTCACCTAC 106763 Query 19110 ATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAATTCATACAATGGGGGATGCA 19169 | | | || | ||||| || || || || || || ||||| |||| |||||| Sbjct 106764 AGGATGGTACACATCACAGGCCTGAAGCCCAATGACTTCATACATACTTTGGGAGATGCA 106823 Query 19170 CATATTTACTTGAATCATATAGATGCT-TTAAAAGTGCAGCTAGCTCGATCCCCAAAACC 19228 ||||||||| ||| |||| | || ||| | ||| ||||||| || |||| || Sbjct 106824 CATATTTACCTGAGTCATGTTGA-GCTGCTGAAAATGCAGCTTCAGTGAGAACCAAGGCC 106882 Query 19229 TTTTCCTTGCCTTAAAATTATTCGAAATGTAACAGA-TATAAACGACTTTAAATGGGACG 19287 ||| | ||||| || || |||| || ||| || | ||||| || | | Sbjct 106883 TTTCCAGAAGCTTAAGATCCTTTGAAAAGT-TGAGACAATTGATGACTTCAAGGTTAAAG 106941 Query 19288 ATTTTCAGCTTGATGGATATAATCCACAccccccccTAAAAATGGAAATGGCT 19340 | |||||| |||| || || ||||| |||| | ||||||||||||||||| Sbjct 106942 ACTTTCAGATTGAGGGGTACAATCCTCACCTTACTATAAAAATGGAAATGGCT 106994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399433969820235