Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq196 251 8e-62 seq110 174 2e-38 seq688 136 5e-27 seq667 122 1e-22 >seq196 Length=3934615 Score = 251 bits (278), Expect = 8e-62 Identities = 596/891 (67%), Gaps = 17/891 (2%) Strand=Plus/Minus Query 176358 CCCGCCCTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATT 176417 ||| | |||||| || ||||| | |||| || |||||||| | |||||| | Sbjct 726048 CCCCCACTGTATTCCCTGGTGTTCGTGGTTGGTCTGCTGGGCAATGCGATGGTGGTGGTG 725989 Query 176418 ATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCA 176477 || ||| || ||||| || | || | | | || ||||| || ||| | || ||||| Sbjct 725988 ATCCTCACAAAATACAGGAGGCTCCGGATCATGACCAACATCTTCCTGCTCAATTTGGCC 725929 Query 176478 ATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTAT 176537 || ||||||||||| || || || ||| ||| |||||||| ||||| | | | || Sbjct 725928 ATTTCTGACTTGCTCTTCCTGTTCACTCTGCTGTTTTGGATTCACTACA---GCAGGTGG 725872 Query 176538 CATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCA 176597 | || ||| || || | | ||||||| || ||| || | | ||||||| Sbjct 725871 AACGAGTGGGTGTTCGGCCACTTCATGTGTAAGCTCCTCTCCGGGCTTTATTACATGGGC 725812 Query 176598 CTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTC 176657 |||||||| || | || | |||||||||||| || ||||| |||| || || | ||| Sbjct 725811 TTGTACAGCGAGATTTTCTTCATCATCCTGCTGACCATAGACCGGTACCTGGCCATCGTC 725752 Query 176658 TATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGT 176717 | || || || || || | || || || | ||| || | | | || Sbjct 725751 CACGCCGTGTTCGCCCTGCGGACCCGGACCGTCACTTTTGGTATCATCATGAGCGTCCTC 725692 Query 176718 ACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAGAT 176777 |||||| ||||||||| | |||||||||||||| |||| ||| |||| || Sbjct 725691 ACCTGGGGCCTGGCAGGGATAGCAGCCCTCCCTGAATTTATCTTCCATCAGTCCCAAAAT 725632 Query 176778 GACAATGGTAGGGTTCAG-TGTGATCCTTACTACCCAGAGATGTCTACAA-ATGTTTGGA 176835 || || | || || ||| ||| || |||| || | | | | || |||| Sbjct 725631 GATGCTGA-ACAGTACATCTGTTTGCCTCTTTATCCAG-GAGGCCAAGAGGATAACTGGA 725574 Query 176836 GGCGCGCCCACGTTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGG 176895 ||| ||| | | | ||| || | ||||| ||||||||||||| |||| Sbjct 725573 AGCGTTTCCATGCTCTGAGCATGAACATCCTCAGTCTGGCCCTGCCTCTGCTCATCATGG 725514 Query 176896 CTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACA 176955 | ||||||||| | |||||| || | |||| |||| |||||| || | ||||||| Sbjct 725513 CCGTCTGCTACGCGGGAATTATTAGGACACTGCTGAGATGCCCCAATAAAACCAAGTACA 725454 Query 176956 AGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACA 177015 |||||||| ||||||| |||||||||||||||| || ||| | || ||||| ||||||| Sbjct 725453 AGGCCATCCGGCTCATTTTTGTCATCATGGTGGTCTTTTTCATGTTCTGGACCCCCTACA 725394 Query 177016 ACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTTAACCTGCAGTGTGCATTGA 177075 || | || ||||| || ||| | || || | | |||||| || || | ||| Sbjct 725393 ACCTGGTCCTCCTTCTCTCTGCTTTCCAAACGA-TCTTCTT----TGAGGTCAGTTGTGA 725339 Query 177076 GC--AGTAACT---TGGACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTG 177130 || || || | | || |||| ||| | | ||| | | |||||||| ||||| Sbjct 725338 GCAGAGCAAATGGCTCGATGTGGCCATGCAGGTGACAGAGGTGATCGCCTACACGCACTG 725279 Query 177131 TTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAGAAGACACCTGTACCA 177190 ||| | ||||| || |||||||| ||||| ||||||| ||| | ||||| ||| Sbjct 725278 CTGCGTTAACCCCGTCATCTACGCCTTCGTCGGGGAGAGGTTCCGGGAGCACCTCAGCCA 725219 Query 177191 CTTCTTCCACACCTACGTGGCCATCTACCTCTGCAAGTACATCCCCTTCCT 177241 |||||||| || |||| |||| | |||| |||| |||||||| ||||| Sbjct 725218 CTTCTTCCGCAGGCACGTCGCCACCAACCTGGGCAAATACATCCCGTTCCT 725168 Score = 251 bits (278), Expect = 8e-62 Identities = 596/891 (67%), Gaps = 17/891 (2%) Strand=Plus/Minus Query 9472 CCCGCCCTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATT 9531 ||| | |||||| || ||||| | |||| || |||||||| | |||||| | Sbjct 726048 CCCCCACTGTATTCCCTGGTGTTCGTGGTTGGTCTGCTGGGCAATGCGATGGTGGTGGTG 725989 Query 9532 ATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCA 9591 || ||| || ||||| || | || | | | || ||||| || ||| | || ||||| Sbjct 725988 ATCCTCACAAAATACAGGAGGCTCCGGATCATGACCAACATCTTCCTGCTCAATTTGGCC 725929 Query 9592 ATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTAT 9651 || ||||||||||| || || || ||| ||| |||||||| ||||| | | | || Sbjct 725928 ATTTCTGACTTGCTCTTCCTGTTCACTCTGCTGTTTTGGATTCACTACA---GCAGGTGG 725872 Query 9652 CATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCA 9711 | || ||| || || | | ||||||| || ||| || | | ||||||| Sbjct 725871 AACGAGTGGGTGTTCGGCCACTTCATGTGTAAGCTCCTCTCCGGGCTTTATTACATGGGC 725812 Query 9712 CTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTC 9771 |||||||| || | || | |||||||||||| || ||||| |||| || || | ||| Sbjct 725811 TTGTACAGCGAGATTTTCTTCATCATCCTGCTGACCATAGACCGGTACCTGGCCATCGTC 725752 Query 9772 TATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGT 9831 | || || || || || | || || || | ||| || | | | || Sbjct 725751 CACGCCGTGTTCGCCCTGCGGACCCGGACCGTCACTTTTGGTATCATCATGAGCGTCCTC 725692 Query 9832 ACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAGAT 9891 |||||| ||||||||| | |||||||||||||| |||| ||| |||| || Sbjct 725691 ACCTGGGGCCTGGCAGGGATAGCAGCCCTCCCTGAATTTATCTTCCATCAGTCCCAAAAT 725632 Query 9892 GACAATGGTAGGGTTCAG-TGTGATCCTTACTACCCAGAGATGTCTACAA-ATGTTTGGA 9949 || || | || || ||| ||| || |||| || | | | | || |||| Sbjct 725631 GATGCTGA-ACAGTACATCTGTTTGCCTCTTTATCCAG-GAGGCCAAGAGGATAACTGGA 725574 Query 9950 GGCGCGCCCACGTTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGG 10009 ||| ||| | | | ||| || | ||||| ||||||||||||| |||| Sbjct 725573 AGCGTTTCCATGCTCTGAGCATGAACATCCTCAGTCTGGCCCTGCCTCTGCTCATCATGG 725514 Query 10010 CTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACA 10069 | ||||||||| | |||||| || | |||| |||| |||||| || | ||||||| Sbjct 725513 CCGTCTGCTACGCGGGAATTATTAGGACACTGCTGAGATGCCCCAATAAAACCAAGTACA 725454 Query 10070 AGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACA 10129 |||||||| ||||||| |||||||||||||||| || ||| | || ||||| ||||||| Sbjct 725453 AGGCCATCCGGCTCATTTTTGTCATCATGGTGGTCTTTTTCATGTTCTGGACCCCCTACA 725394 Query 10130 ACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTTAACCTGCAGTGTGCATTGA 10189 || | || ||||| || ||| | || || | | |||||| || || | ||| Sbjct 725393 ACCTGGTCCTCCTTCTCTCTGCTTTCCAAACGA-TCTTCTT----TGAGGTCAGTTGTGA 725339 Query 10190 GC--AGTAACT---TGGACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTG 10244 || || || | | || |||| ||| | | ||| | | |||||||| ||||| Sbjct 725338 GCAGAGCAAATGGCTCGATGTGGCCATGCAGGTGACAGAGGTGATCGCCTACACGCACTG 725279 Query 10245 TTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAGAAGACACCTGTACCA 10304 ||| | ||||| || |||||||| ||||| ||||||| ||| | ||||| ||| Sbjct 725278 CTGCGTTAACCCCGTCATCTACGCCTTCGTCGGGGAGAGGTTCCGGGAGCACCTCAGCCA 725219 Query 10305 CTTCTTCCACACCTACGTGGCCATCTACCTCTGCAAGTACATCCCCTTCCT 10355 |||||||| || |||| |||| | |||| |||| |||||||| ||||| Sbjct 725218 CTTCTTCCGCAGGCACGTCGCCACCAACCTGGGCAAATACATCCCGTTCCT 725168 Score = 113 bits (124), Expect = 5e-20 Identities = 224/327 (69%), Gaps = 6/327 (2%) Strand=Plus/Plus Query 9991 TTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGC 10050 ||||||||||| | ||| ||||||||| | || | || | ||| | ||||| Sbjct 763682 TTGCCTCTGCTGGTCATGATCGTCTGCTACACCGAGATCGTAAGGATTCTGCTCAGGCGA 763741 Query 10051 CCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTT 10110 |||| | |||||||| ||| ||| || | || || || ||||||||| | | || ||| Sbjct 763742 CCCAACGAGAAGAAGGCCAAAGCCGTCCGCCTGATTTTCGTCATCATGATCGTCTTCTTT 763801 Query 10111 GTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTT 10170 | || ||||| || |||||| | | | || | ||| | || || | |||||| || Sbjct 763802 CTCTTCTGGACCCCTTACAACCTGGCCATGCTGGTCTCTGCTTTCCAAGACACCCTT-TT 763860 Query 10171 AACCTGC-AGTGT--GCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACA 10227 ||| | ||||| ||| ||||| | ||||| |||| ||| | | || | Sbjct 763861 CACCGACGAGTGTCGGCA--GAGCAAACAGCTGGACGTGGCCATGCAGGTGACGGAGGTG 763918 Query 10228 GTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTT 10287 | |||||||| ||||| ||| ||||||| || ||||| || |||||||| |||| ||| Sbjct 763919 ATCGCCTACACGCACTGCTGCGTCAACCCCGTCATCTATGCCTTCGTGGGAGAGAGGTTC 763978 Query 10288 AGAAGACACCTGTACCACTTCTTCCAC 10314 | || ||||| ||| | |||||| Sbjct 763979 CGCAGGTACCTGCGCCAGCTGTTCCAC 764005 Score = 113 bits (124), Expect = 5e-20 Identities = 224/327 (69%), Gaps = 6/327 (2%) Strand=Plus/Plus Query 176877 TTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGC 176936 ||||||||||| | ||| ||||||||| | || | || | ||| | ||||| Sbjct 763682 TTGCCTCTGCTGGTCATGATCGTCTGCTACACCGAGATCGTAAGGATTCTGCTCAGGCGA 763741 Query 176937 CCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTT 176996 |||| | |||||||| ||| ||| || | || || || ||||||||| | | || ||| Sbjct 763742 CCCAACGAGAAGAAGGCCAAAGCCGTCCGCCTGATTTTCGTCATCATGATCGTCTTCTTT 763801 Query 176997 GTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTT 177056 | || ||||| || |||||| | | | || | ||| | || || | |||||| || Sbjct 763802 CTCTTCTGGACCCCTTACAACCTGGCCATGCTGGTCTCTGCTTTCCAAGACACCCTT-TT 763860 Query 177057 AACCTGC-AGTGT--GCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACA 177113 ||| | ||||| ||| ||||| | ||||| |||| ||| | | || | Sbjct 763861 CACCGACGAGTGTCGGCA--GAGCAAACAGCTGGACGTGGCCATGCAGGTGACGGAGGTG 763918 Query 177114 GTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTT 177173 | |||||||| ||||| ||| ||||||| || ||||| || |||||||| |||| ||| Sbjct 763919 ATCGCCTACACGCACTGCTGCGTCAACCCCGTCATCTATGCCTTCGTGGGAGAGAGGTTC 763978 Query 177174 AGAAGACACCTGTACCACTTCTTCCAC 177200 | || ||||| ||| | |||||| Sbjct 763979 CGCAGGTACCTGCGCCAGCTGTTCCAC 764005 >seq110 Length=1713729 Score = 174 bits (192), Expect = 2e-38 Identities = 135/161 (84%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 ||||| |||| ||| |||| ||||||||| ||||||||||||||||| ||||||||||| Sbjct 1660658 AGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGT 1660717 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || ||||| |||||||| || || | |||||||||||||||||| || || ||| | || Sbjct 1660718 ACACCCAGGCCCATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGTTCACCGTTCACC 1660777 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 |||||||||||||| || ||||| || ||||||||||| Sbjct 1660778 ACGTAGAACTGGCAAAGAGCATGGCACGGAGGCAGGGCCAT 1660818 >seq688 Length=229267 Score = 136 bits (150), Expect = 5e-27 Identities = 232/333 (70%), Gaps = 4/333 (1%) Strand=Plus/Minus Query 145566 GTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCTGAAGTCATCTATGTCCTCCAC 145625 ||| || | ||| ||||| | | |||||| | || |||||||||| || ||| || Sbjct 106970 GTGAGGATTGTACCCCTCAATCTGAAAGTCTTTAACCTTGAAGTCATCAATTGTCTCAAC 106911 Query 145626 CCGCCTCAGGATCCTGAGCCTG-GGAAAGGGCCGGGGGCTC-CTGGTCAGCTGGAGCTTC 145683 | |||||| | ||| | ||||||| | || ||| ||| ||||| | ||| Sbjct 106910 TTTTCAAAGGATCTTAAGCTTCTGGAAAGGCCTTGGTTCTCACTGA--AGCTGCATTTTC 106853 Query 145684 AGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCG 145743 || |||| || || | ||||| | || || || |||| || |||||||| | Sbjct 106852 AGCAGCTCAACATGACTCAGGTAAATATGTGCATCTCCCAAAGTATGTATGAAGTCATTG 106793 Query 145744 GGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTG 145803 |||| ||||| |||| ||| | | | ||||||| ||||||| ||||||| | || Sbjct 106792 GGCTTCAGGCCTGTGATGTGTACCATCCTGTAGGTGAGCAGGGCATAGCTGGTGACACTG 106733 Query 145804 AAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCG 145863 ||||||| |||| |||||||| || |||| | |||||||||| ||||| ||||| || Sbjct 106732 GAGGGCACAACCAGGCCCATGTCTCCTGAGCTCCGGTACAGCTGACAGGACAGCTCACCA 106673 Query 145864 CCCGCCACGTAGAACTGGCACAGGAGGTGGCAG 145896 ||| |||||||||||| ||| |||||| Sbjct 106672 TTTTCCAGGTAGAACTGGCAAAGGGAATGGCAG 106640 >seq667 Length=4639459 Score = 122 bits (134), Expect = 1e-22 Identities = 108/133 (81%), Gaps = 3/133 (2%) Strand=Plus/Plus Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141 ||||||| ||| |||| || |||||| || |||||||| |||||||||||||| | | Sbjct 1405658 CAGCGCCGCAGTCTCAGCCGGAGGGTCTTCAGCTTTTCTCCCAGGGAGTTCACGTGCTG- 1405716 Query 138142 TTTTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACTGG 138201 ||| || ||| | | |||||| |||||||||||||||||||||| |||||||||| Sbjct 1405717 -TTTGATGTCCGGGTCC-TCGTTCTCAGCCTGGGGCATCACCTCCTCCAAGTAAAACTGG 1405774 Query 138202 ATCATCTCAGACA 138214 |||||||| |||| Sbjct 1405775 ATCATCTCGGACA 1405787 Score = 113 bits (124), Expect = 5e-20 Identities = 82/95 (86%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 137922 TCAGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACTC 137981 |||| |||||||||| | |||||||| || ||||||||||| ||||||||||||||||| Sbjct 1403405 TCAGATTTTCATCTTCATTGTCATGTAAGCTTCTATGTAGTTGATGAAGATGTCAAACTC 1403464 Query 137982 GCTCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016 | |||||| |||||||| ||||| || ||||||| Sbjct 1403465 ACCCATGGCTTTGTAGACACCTTTCTCTTGGAGCT 1403499 Score = 96.9 bits (106), Expect = 4e-15 Identities = 135/182 (74%), Gaps = 8/182 (4%) Strand=Plus/Plus Query 138297 AAAGAAGGTCTTTACCCTGCTGAAGGCGGCCCTGAGCTCGTGGAGCATGTGGGGCAGGCT 138356 |||||| ||||| ||| ||| |||||| || | |||||| ||||||||||||||||||| Sbjct 1408599 AAAGAACGTCTTCACCTTGCCGAAGGCAGCTCGGAGCTCTCGGAGCATGTGGGGCAGGCT 1408658 Query 138357 G-GTGGGCAATGTAGGGCAGTCGTCCCCAGACTCACTGTCATAT-TTGTTGTC-GGCCCA 138413 | || | | || | ||||| |||| |||| || || | | ||| | | ||| | Sbjct 1408659 GACTGAGAAGTG-GGTGCAGTTGTCCTCAGA--CAGGGTGCTCTGGTGTCGGCTGGCTCC 1408715 Query 138414 CACCCCGGCCAGGAGAACCAGGCAACACAGCAGCGATGCCCTGAACATGGCTAA--TCTG 138471 ||||||||||||| |||||| ||||||| || | || ||| |||||| || |||| Sbjct 1408716 TACCCCGGCCAGGAAGACCAGGAAACACAGAAGTGCTGGGCTGGGCATGGCGAAGCTCTG 1408775 Query 138472 CC 138473 || Sbjct 1408776 CC 1408777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589970711567320