Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq525 161 1e-34 seq649 140 3e-28 seq460 114 1e-20 seq321 100 3e-16 seq226 95.1 1e-14 seq1096 93.3 4e-14 seq1340 82.4 8e-11 >seq525 Length=1461377 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | |||||||| ||||||||| | || || || ||| Sbjct 453996 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 454055 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || || | |||||||||||||||||| | |||||| Sbjct 454056 GACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAG 454115 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| || || ||||||||||| || | ||||||||| ||||||||| Sbjct 454116 CAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 454175 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| ||||||| || || || ||||||||||||| || Sbjct 454176 ATCCAGAAGGAGTCCACGCTCCACCTGGTCCTGCGCTTGAGGGGAGG 454222 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | |||||||| ||||||||| | || || || ||| Sbjct 453312 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 453371 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || || | |||||||||||||||||| | |||||| Sbjct 453372 GACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAG 453431 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| || || ||||||||||| || | ||||||||| ||||||||| Sbjct 453432 CAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 453491 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| |||||||||| || || | ||| | || || ||| Sbjct 453492 ATCCAGAAGGAGTCCACGCTGCACCTGGTCCTCCGCCTCAGAGGGGGC 453539 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | |||||||| ||||||||| | || || || ||| Sbjct 453540 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 453599 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || || | |||||||||||||||||| | |||||| Sbjct 453600 GACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAG 453659 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| || || ||||||||||| || | ||||||||| ||||||||| Sbjct 453660 CAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 453719 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| |||||||||| || || | ||| | || || ||| Sbjct 453720 ATCCAGAAGGAGTCCACGCTGCACCTGGTCCTCCGCCTCAGAGGGGGC 453767 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | |||||||| ||||||||| | || || || ||| Sbjct 453768 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 453827 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || || | |||||||||||||||||| | |||||| Sbjct 453828 GACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAG 453887 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| || || ||||||||||| || | ||||||||| ||||||||| Sbjct 453888 CAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 453947 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| |||||||||| || || | ||| | || || ||| Sbjct 453948 ATCCAGAAGGAGTCCACGCTGCACCTGGTCCTCCGCCTCAGAGGGGGC 453995 Score = 145 bits (160), Expect = 8e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || | |||||||| ||||||||| | || || || ||| Sbjct 453084 ATGCAGATCTTTGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 453143 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || || | |||||||||||||||||| | |||||| Sbjct 453144 GACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAG 453203 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| || || ||||||||||| || | ||||||||| ||||||||| Sbjct 453204 CAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 453263 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| |||||||||| || || | ||| | || || ||| Sbjct 453264 ATCCAGAAGGAGTCCACGCTGCACCTGGTCCTCCGCCTCAGAGGGGGC 453311 >seq649 Length=3559941 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||||||||||| ||||| || || || || ||||| ||||||||| | || || || || Sbjct 3263749 AAAATGCAAATCTTCGTGAAGACCCTAACTGGCAAGACCATCACCCTGGAGGTGGAGCCC 3263808 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | ||| | |||| || || | || || |||||||||||| | ||| Sbjct 3263809 AGTGACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCAGAC 3263868 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | ||||||| || ||||| |||||||| || | ||||| || || ||| Sbjct 3263869 CAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTAC 3263928 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||| ||| | || ||||| || || |||| ||||||| || Sbjct 3263929 AACATCCAGAAAGAGTCGACCCTGCACCTGGTTCTGCGTCTGAGGGGTGG 3263978 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||||||| | || || || ||| Sbjct 3263980 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 3264039 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| | |||| || || | || || |||||||||||| | |||||| Sbjct 3264040 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCAGACCAG 3264099 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | ||||||| || ||||| |||||||| || | ||||| || || |||||| Sbjct 3264100 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 3264159 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||| ||| |||| || ||||| || | || ||||||| ||| Sbjct 3264160 ATCCAGAAAGAGTCCACTCTCCATCTGGTTCTTCGTCTGAGGGGTGGC 3264207 >seq460 Length=4635380 Score = 114 bits (126), Expect = 1e-20 Identities = 145/197 (74%), Gaps = 3/197 (2%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| ||||| || || ||| | |||||| ||||||||| | ||||| || ||| Sbjct 1644396 ATGCAGATATTTGTGAAGACGG--ATGGGCAAGACCATCACCCTTGACGTTGAGACCAAT 1644339 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | || | | | |||| | ||||| | ||||| ||||||||||| |||||| Sbjct 1644338 GATACCATGGAGAAGGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCGCTTGACCAG 1644279 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 | || || || | ||||||||||||||||| ||| | | ||| ||| |||||||| Sbjct 1644278 CGGCGTCTGAT-TGTGCGGGCAAACAGCTGGAGGACAACCACACTCTCTCAGACTACAAT 1644220 Query 40870 ATCCAGAAGGAGGCCAC 40886 |||||||| ||| |||| Sbjct 1644219 ATCCAGAAAGAGTCCAC 1644203 >seq321 Length=5251196 Score = 100 bits (110), Expect = 3e-16 Identities = 160/226 (71%), Gaps = 3/226 (1%) Strand=Plus/Plus Query 40693 CAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGAC 40752 || || || || || || || | ||||||| ||| |||| || ||| | ||| ||| Sbjct 2386081 CAGATCTTTGTGAAGACCCTGATGGGCAAAGCCACCACCCCTGAGGTCAAGCCCAGTGAC 2386140 Query 40753 AGCG-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCA 40811 | | || || | |||| | ||||| | ||||||||||||| ||| | | |||||| Sbjct 2386141 ACCACTGACAATG-TCAAAGTCAAAATCCAAGACAAAGAGGGCACCCCACCTGTCCAGCA 2386199 Query 40812 ACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACAT 40871 | || || | |||||||||||||||||| | | | ||| || |||||||| || Sbjct 2386200 GCATCTGATTTTCGCGGGCAAACAGCTGGAGGCTGGCCACACTCTGTCAGACTACAATAT 2386259 Query 40872 CCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||| ||| |||| ||||| || ||| | ||| |||||||| Sbjct 2386260 CCAGAAAGAGTCCACCCTGCA-CTGGTGCTTCGCCCATGGGGCGGC 2386304 >seq226 Length=3090976 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/202 (72%), Gaps = 5/202 (2%) Strand=Plus/Minus Query 40693 CAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGAC 40752 ||||| || || || || || | |||||| ||||||||| || | ||||| ||| ||| Sbjct 1604444 CAAATCTTTGTGAAGACCCTGATGGGCAAGACCATCACCCTCAAGGTCGAGCCCAGTGAC 1604385 Query 40753 AGCG-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCA 40811 | | || || | ||| | ||||| | ||||| |||||||||| | |||||||| Sbjct 1604384 ACCACTGAGAATGG-CAAAGCCAAAATCCAAGACAAGGAGGGCATCCTGCCTGACCAGCA 1604326 Query 40812 ACGACTCATCTACGCGGG-CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 40870 | || || | || || |||||||||||| |||| ||| | ||| ||| |||| | Sbjct 1604325 GCATCTGATTTTTGCAGGACAAACAGCTGGAGGACGGCCGCCCTCTCCCAGACCACAATA 1604266 Query 40871 TCCAGAAGGAGGCCACGCTGCA 40892 |||||| ||| |||| ||||| Sbjct 1604265 TCCAGA--GAGTCCACCCTGCA 1604246 >seq1096 Length=651278 Score = 93.3 bits (102), Expect = 4e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 117032 GGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCC 117091 || ||||| | |||||||| || || || || || |||||||||| || |||||| Sbjct 434445 GGAGAGCGGGTTGTGGCCTTTGCTGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTCGCG 434504 Query 117092 GCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTC 117151 | ||||| |||||||||||||||||||| ||||| ||||| || || ||| || || Sbjct 434505 TCGATATTCTGGCTCAAGAAACGCGGCCTGATGCCTGGCCTCACATTTTCCAATGAACTT 434564 Query 117152 ATCTCCAGGGACGAGG 117167 || ||| || |||| Sbjct 434565 ATTAGCAGAGATGAGG 434580 >seq1340 Length=194060 Score = 82.4 bits (90), Expect = 8e-11 Identities = 131/188 (70%), Gaps = 10/188 (5%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || | || | ||| || || |||||| || | ||| ||||||| Sbjct 124035 ATGCAGATCTTTGTGAAGCCTCTGATGGGTAAGACTATCACCCTCAAGGTC-AAGCCACT 124093 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | || |||| ||||| | ||||| ||||||||||| | ||||| Sbjct 124094 GAGAATGTCAAAACC---------AAAATCCAAGACAAGGAGGGCATCCCACCTCACCAG 124144 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||| | | ||||||||||||||| || | ||||| ||| | |||||| Sbjct 124145 CAGCGTCTCATTTTTGTGGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGGCTACAAT 124204 Query 40870 ATCCAGAA 40877 ||||||| Sbjct 124205 CTCCAGAA 124212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515126570028080