Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13]
14,383 sequences; 2,372,553,907 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq525 145 6e-30
seq649 96.9 3e-15
seq226 89.7 4e-13
>seq525
Length=1461377
Score = 145 bits (160), Expect = 6e-30
Identities = 158/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||||||| ||||||||| ||||||||||| ||| ||| | || |||
Sbjct 453292 ACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 453233
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| ||||| ||||| || ||||||| ||| ||||| || || | ||||| ||||||
Sbjct 453232 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTGG 453173
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | | |||| | ||||||||||| ||| || ||||||
Sbjct 453172 ATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 453113
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
||||||| |||||||||||||| ||||||
Sbjct 453112 CCCGTCAAGGTCTTCACAAAGATCTGCATG 453083
Score = 140 bits (154), Expect = 3e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||||||| ||||||||| ||||||||||| ||| ||| | || |||
Sbjct 453520 ACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 453461
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| ||||| ||||| || ||||||| ||| ||||| || || | ||||| ||||||
Sbjct 453460 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTGG 453401
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | | |||| | ||||||||||| ||| || ||||||
Sbjct 453400 ATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 453341
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
||||||| |||||||| ||||| ||||||
Sbjct 453340 CCCGTCAAGGTCTTCACGAAGATCTGCATG 453311
Score = 140 bits (154), Expect = 3e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||||||| ||||||||| ||||||||||| ||| ||| | || |||
Sbjct 453748 ACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 453689
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| ||||| ||||| || ||||||| ||| ||||| || || | ||||| ||||||
Sbjct 453688 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTGG 453629
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | | |||| | ||||||||||| ||| || ||||||
Sbjct 453628 ATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 453569
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
||||||| |||||||| ||||| ||||||
Sbjct 453568 CCCGTCAAGGTCTTCACGAAGATCTGCATG 453539
Score = 140 bits (154), Expect = 3e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||||||| ||||||||| ||||||||||| ||| ||| | || |||
Sbjct 453976 ACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 453917
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| ||||| ||||| || ||||||| ||| ||||| || || | ||||| ||||||
Sbjct 453916 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTGG 453857
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | | |||| | ||||||||||| ||| || ||||||
Sbjct 453856 ATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 453797
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
||||||| |||||||| ||||| ||||||
Sbjct 453796 CCCGTCAAGGTCTTCACGAAGATCTGCATG 453767
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|| || ||||| | | |||| ||| |||||| ||||||||| ||||||||||| |
Sbjct 454222 CCTCCCCTCAAGCGCAGGACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGAC 454163
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| ||| | || ||||| ||||| ||||| || ||||||| ||| ||||| || ||
Sbjct 454162 AGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 454103
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| ||||| |||||| || || ||| || | | | | |||| | |||||||
Sbjct 454102 ATGCCCTCTTTGTCCTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACC 454043
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|||| ||| || ||||||||||||| |||||||| ||||| ||||||
Sbjct 454042 TCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCATG 453995
>seq649
Length=3559941
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||| |||| | | |||| |||||| || ||| ||||| |||||||| ||
Sbjct 3263978 CCACCCCTCAGACGCAGAACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAA 3263919
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| ||| | || ||||| || || || || || || | || ||| ||||| || ||
Sbjct 3263918 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 3263859
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| |||||||| ||| || || ||| || | | | |||| | |||||||
Sbjct 3263858 ATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 3263799
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
|||| ||| || |||||||| || || |||||||| ||||||||||| |||
Sbjct 3263798 TCCAGGGTGATGGTCTTGCCAGTTAGGGTCTTCACGAAGATTTGCATTTTG 3263748
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168
|||||| |||| | | |||| || || ||| ||| ||||| |||||||| ||
Sbjct 3264207 GCCACCCCTCAGACGAAGAACCAGATGGAGAGTGGACTCTTTCTGGATGTTGTAATCAGA 3264148
Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| ||| | || ||||| || || || || || || | || ||| ||||| || ||
Sbjct 3264147 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGG 3264088
Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288
| |||||||| ||| || || ||| || | | | |||| | ||||||
Sbjct 3264087 GATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCAC 3264028
Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| ||| || |||||||| ||||| |||||||| ||||| |||||
Sbjct 3264027 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 3263980
>seq226
Length=3090976
Score = 89.7 bits (98), Expect = 4e-13
Identities = 159/227 (70%), Gaps = 5/227 (2%)
Strand=Plus/Plus
Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168
|||||||| || | || ||| ||||||| ||| ||| |||| || |||| |||
Sbjct 1604221 GCCACCTCGCAGGCGTAGCACCCAGTGCAGGGTGGACTC--TCTGGATATTGTGGTCTGG 1604278
Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTT-TCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
|| |||| |||| ||||| ||||| ||| || || |||| |||| ||||| ||
Sbjct 1604279 GAGAGGGCGGCCGTCCTCCAGCTGTTTGTCCTGCAAAAATCAGATGCTGCTGGTCAGGCA 1604338
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCAC-GCTGTCCCCACCCTCC 45286
| | ||||||||||| ||||| |||| || || | |||| | |||
Sbjct 1604339 GGATGCCCTCCTTGTCTTGGATTTTG-GCTTTGCCATTCTCAGTGGTGTCACTGGGCTCG 1604397
Query 45287 ACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTG 45333
|||| | ||| || ||||||||| |||| |||||||||||||||||
Sbjct 1604398 ACCTTGAGGGTGATGGTCTTGCCCATCAGGGTCTTCACAAAGATTTG 1604444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395005946157043
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |