Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13]
14,383 sequences; 2,372,553,907 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq1096 105 6e-18
>seq1096
Length=651278
Score = 105 bits (116), Expect = 6e-18
Identities = 96/121 (79%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953
|||||||||| ||||||||||| || |||||||| | || ||||||| || ||||| |
Sbjct 434580 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGGCCGCGTTTCT 434521
Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013
| | ||| ||||| | || || || || |||||||| ||||| || ||||||||||| |
Sbjct 434520 TGAGCCAGAATATCGACGCGAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAGG 434461
Query 14014 C 14014
|
Sbjct 434460 C 434460
Score = 100 bits (110), Expect = 3e-16
Identities = 107/139 (77%), Gaps = 2/139 (1%)
Strand=Plus/Minus
Query 13524 TAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTGT-TAGAAATAACGCCCATTTT 13582
|| || ||| |||| || | |||| ||| || | || | | || || || ||||| |
Sbjct 436090 TAGAAGTCAGCATCCAAGGTAAAAGAATTCTC-TGTTGGACTTGACATCACTCCCATCCT 436032
Query 13583 TTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13642
||||| || | ||||| || |||||||||||||| || ||||||||||| ||||| ||
Sbjct 436031 CTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTGCCTTCCAGTGAAATATTCTC 435972
Query 13643 CATAAAATCAAATGGATTT 13661
|||||| ||||||||||||
Sbjct 435971 CATAAAGTCAAATGGATTT 435953
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479641750902200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |