Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq692 82.4 6e-11 >seq692 Length=1323805 Score = 82.4 bits (90), Expect = 6e-11 Identities = 141/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 42912 AGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCC 42971 |||| ||||||||| | ||||| || | ||| |||||| | || |||| ||| ||||| Sbjct 819853 AGTGGACTCCTTTTGAATGTTGTAGTCAGGCAAAGTACGTCCATCTTCCAGTTGCTTGCC 819912 Query 42972 GGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGA-TCAACTCTT 43030 ||||| ||||| | ||| | ||| | || | |||| || || |||| || ||| Sbjct 819913 AGCAAAGATCAAACTCTGCTCATCAGGAGGAATTTCTTCCTTATC-CTGAATCTTGGCTT 819971 Query 43031 TGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAG 43090 | | || | | ||| || | || || || || | || || ||||| || || | Sbjct 819972 TCATACTTTCTATTGTATCCGAGGGTTCAACCTCAACACTGATGGTCTTTCCTGTAAGGG 820031 Query 43091 TTTTCACAAAAATTTGCATTTT 43112 ||||||||||||||||||| || Sbjct 820032 TTTTCACAAAAATTTGCATCTT 820053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381302748650214