Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq649 86.0 9e-12 seq110 84.2 3e-11 >seq649 Length=3559941 Score = 86.0 bits (94), Expect = 9e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 127443 GAATCCGTGCGTCAGGTGGCCTCCGTCGGGCAGATCGAGTCCCATGATTCTACCGTGCGG 127502 ||| ||||| ||||||||||| ||||||||||| ||||| |||||||| | ||||| || Sbjct 1618117 GAACCCGTGGGTCAGGTGGCCCCCGTCGGGCAGGTCGAGGCCCATGATGCGCCCGTGGGG 1618176 Query 127503 TTTAACGATTCCAGTGTACACGGCAAAGTTGGCCATCGAGCC 127544 || || | | || |||||||| ||||| ||| ||||| Sbjct 1618177 TTCCACCAGCGCGGTATACACGGCGAAGTTTGCCGGGGAGCC 1618218 >seq110 Length=1713729 Score = 84.2 bits (92), Expect = 3e-11 Identities = 123/169 (73%), Gaps = 10/169 (6%) Strand=Plus/Minus Query 70250 ATGGCACTACCACCGTGTCA--CTGTTTGGCTCAGTTTTAC-TCGT--ACGATGGCAAAT 70304 ||||| || || ||||| || || |||| | |||| ||| | || ||| || || Sbjct 1660818 ATGGCCCTGCCTCCGTGCCATGCTCTTTGCC--AGTTCTACGTGGTGAACGGTG---AAC 1660764 Query 70305 TGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTG 70364 |||| ||| |||| |||||| | ||||||||||| ||||||||||| ||||| | Sbjct 1660763 TGTCCTGCCAGCTGTACCAGAGGTCAGGAGACATGGGCCTGGGTGTACCCTTCAACATCG 1660704 Query 70365 CAAGCTATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAA 70413 | ||||| || || | || ||||||| || ||||| || |||||||| Sbjct 1660703 CCAGCTACTCCCTGCTCACCTACATGATCGCACACATCACAGGCCTGAA 1660655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740925966819080