Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq110 105 5e-18 >seq110 Length=1713729 Score = 105 bits (116), Expect = 5e-18 Identities = 114/150 (76%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || |||||||| ||||| || |||||||||||||||| |||||||| || | |||||| Sbjct 1660673 GCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGTACACCCAGGCCCATG 1660732 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625 | | || ||||||||||| ||||| || || || || ||| |||||| ||||| || Sbjct 1660733 T-CTCCTGACCTCTGGTACAGCTGGCAGGACAGTTCACCGTTCACCACGTAGAACTGGCA 1660791 Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAG 25655 | | | ||||||||| || || || || Sbjct 1660792 AAGAGCATGGCACGGAGGCAGGGCCATCAG 1660821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340077976323459