Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_006146.1 Length=171096 Score E Sequences producing significant alignments: (Bits) Value seq667 113 5e-20 >seq667 Length=4639459 Score = 113 bits (124), Expect = 5e-20 Identities = 94/115 (82%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 10164 TGTCTGAAATGATCCAGTTTTACCTGGAGGAAGTAATGCCACAGGCTGAAAATCAGGACC 10223 |||| || ||||||||||||||| ||||||| || ||||| |||||||| || |||||| Sbjct 1405787 TGTCCGAGATGATCCAGTTTTACTTGGAGGAGGTGATGCCCCAGGCTGAGAACGAGGACC 1405728 Query 10224 CCCACGCCAAAGAGCACGTGAACTCTCTGGGCGAGAATCTAAAGACCCTAAGGCT 10278 | || |||| ||||||||||||| ||||| || || || |||||||| |||| Sbjct 1405727 CGGACATCAAACAGCACGTGAACTCCCTGGGAGAAAAGCTGAAGACCCTCCGGCT 1405673 Score = 95.1 bits (104), Expect = 1e-14 Identities = 72/85 (85%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 10359 AGCTGCAGGAAAAAGGAGTCTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTATA 10418 |||| || || ||||| ||||||||||||||| |||| |||||||| || || ||||| | Sbjct 1403499 AGCTCCAAGAGAAAGGTGTCTACAAAGCCATGGGTGAGTTTGACATCTTCATCAACTACA 1403440 Query 10419 TAGAAGCATACATGACCATGAAAAT 10443 ||||||| |||||||| ||||| || Sbjct 1403439 TAGAAGCTTACATGACAATGAAGAT 1403415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547280788062080