Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1096 87.8 2e-12 >seq1096 Length=651278 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||| || || || | ||| |||||| |||||||||| || ||||| ||||||||| Sbjct 432392 ATGTAAGTGTCAATGAGGAGACTATACATCTCAGAATGGATGTTTTCCATGGCAATTTGG 432333 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTG 93462 || || |||||||| | ||||| || ||||| |||||||| Sbjct 432332 AAGCCATAGAAACAGCGGGCTTCAGTAATCTGAACTTCTTG 432292 Score = 87.8 bits (96), Expect = 2e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193 |||||| ||||| | || || | ||| || |||||||||||||| ||||| || || Sbjct 434560 TCATTGGAAAATGTGAGGCCAGGCATCAGGCCGCGTTTCTTGAGCCAGAATATCGACGCG 434501 Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAA 93239 ||| ||||||||| || || |||||||| || ||||| ||||||| Sbjct 434500 AAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAGGCCACAA 434455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556760683388920