Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq460 104 2e-17 seq649 98.7 8e-16 seq692 95.1 1e-14 >seq460 Length=4635380 Score = 104 bits (114), Expect = 2e-17 Identities = 143/198 (72%), Gaps = 3/198 (2%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| || || | || || || |||| ||||| || || |||| Sbjct 1644397 GATGCAGATATTTGTGAAGACGG--ATGGGCAAGACCATCACCCTTGACGTTGAGACCAA 1644340 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 |||||| |||| | ||||| ||||| |||||||||||||| || || | || || Sbjct 1644339 TGATACCATGGAGAAGGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCGCTTGACCA 1644280 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 | ||||| || | ||| ||||||||| | ||||| ||| ||| |||| || ||||| Sbjct 1644279 GCGGCGTCTGAT-TGTGCGGGCAAACAGCTGGAGGACAACCACACTCTCTCAGACTACAA 1644221 Query 22398 CATTCAAAAAGAATCCAC 22415 || || ||||| ||||| Sbjct 1644220 TATCCAGAAAGAGTCCAC 1644203 >seq649 Length=3559941 Score = 98.7 bits (108), Expect = 8e-16 Identities = 171/248 (69%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 22202 TTTATACATTT---GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCA 22258 |||| || ||| || || |||||||| || || || || |||| || || || ||| Sbjct 3263732 TTTAAACGTTTTAGGTCAAAATGCAAATCTTCGTGAAGACCCTAACTGGCAAGACCATCA 3263791 Query 22259 CTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGG 22318 | || || ||||| ||| || ||| | || || | || || || || || |||| Sbjct 3263792 CCCTGGAGGTGGAGCCCAGTGACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGG 3263851 Query 22319 AGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACC 22378 |||| || || || || || || | || || ||||| ||||| ||| | || ||| || Sbjct 3263852 AGGGCATCCCCCCAGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCC 3263911 Query 22379 GCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGC 22438 |||| | || ||||||||||| || ||||| || ||| | || | ||| |||| || Sbjct 3263912 GCACTCTTTCTGATTACAACATCCAGAAAGAGTCGACCCTGCACCTGGTTCTGCGTCTGA 3263971 Query 22439 GCGGAGGT 22446 | || ||| Sbjct 3263972 GGGGTGGT 3263979 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || ||||| ||| Sbjct 3263980 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 3264039 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | || || || || || |||||||| || || || || || Sbjct 3264040 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCAGACCAG 3264099 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| ||||| ||| | || ||| |||||| | || ||||||||| Sbjct 3264100 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 3264159 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 || || ||||| ||||| | ||| | ||| Sbjct 3264160 ATCCAGAAAGAGTCCACTCTCCATCTGGTT 3264189 >seq692 Length=1323805 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 ||||||||||||||||| ||||| | || || || || ||| | |||| || ||| || Sbjct 820053 AAGATGCAAATTTTTGTGAAAACCCTTACAGGAAAGACCATCAGTGTTGAGGTTGAACCC 819994 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || ||| ||| || ||||| || ||||| | ||||| || ||| Sbjct 819993 TCGGATACAATAGAAAGTATGAAAGCCAAGATTCAGGATAAGGAAGAAATTCCTCCTGAT 819934 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 | || || | || ||||| ||||| || | || ||| || || | | || ||| Sbjct 819933 GAGCAGAGTTTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGCCTGACTAC 819874 Query 22396 AACATTCAAAAAGAATCCAC 22415 ||||||||||| || ||||| Sbjct 819873 AACATTCAAAAGGAGTCCAC 819854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419654424698395