Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq692 89.7 4e-13 >seq692 Length=1323805 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| | |||||| | || || ||||| |||||||| || | | | | | ||||| Sbjct 819843 AACGAGATGAAGTG--GACTCCTTTTGAATGTTGTAGTCAGGCAAAGTACGTCCATCTTC 819900 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | ||| |||||||| | ||||||| ||| | || |||||| ||||||| || Sbjct 819901 CAGTTGCTTGCCAGCAAAGATCAAACTCTGCTCATCAGGAGGAATTTCTTCCTTATCCTG 819960 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 ||| ||| ||| | | ||||||| ||||| ||| || || | | ||||| || Sbjct 819961 AATCTTGGCTTTCATACTTTCTATTGTATCCGAGGGTTCAACCTCAACACTGATGGTCTT 820020 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 ||||| || ||||| |||||||||||||| || Sbjct 820021 TCCTGTAAGGGTTTTCACAAAAATTTGCATCTT 820053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357329351751155