Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq194 138 3e-27 seq649 132 1e-25 seq692 127 5e-24 seq525 127 5e-24 seq969 100 7e-16 seq331 89.7 1e-12 seq446 84.2 5e-11 seq316 84.2 5e-11 >seq194 Length=5677166 Score = 138 bits (152), Expect = 3e-27 Identities = 158/212 (75%), Gaps = 8/212 (4%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 |||| || ||||| |||||||| ||||||||||| | |||||||||| |||| | | Sbjct 189053 AGTCCCAACACAAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCA----AAGTACAT 189108 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||||||||| ||||| || || ||||| | | |||||| || |||| | ||||| Sbjct 189109 CCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTCTGCTGATCAGGAAGAGTTCCT--- 189165 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 | ||||||||||| |||||| ||| | || | || | ||| || || | ||| Sbjct 189166 -GATCCTGAATCTTGGCCTTCACATTTTCTATTGTATTTGAAGGTTCAACCTCAAGAGTG 189224 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAAT 199623 || ||||| ||| | ||||||||||| ||||| Sbjct 189225 ATGGTCTTCCCCATAAGAGTTTTCACGAAAAT 189256 >seq649 Length=3559941 Score = 132 bits (146), Expect = 1e-25 Identities = 161/219 (74%), Gaps = 3/219 (1%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| || ||||| || |||||||| || |||| |||||| |||| | ||| | ||||| Sbjct 3263964 CAGAACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATC 3263905 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| || || |||||||| | ||||||||| || || || || || Sbjct 3263904 TTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATC 3263845 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| |||||| ||||| |||||| | | || || |||| ||||| || Sbjct 3263844 CTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 3263785 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 ||| || || || || ||||| || ||||| |||||| Sbjct 3263784 CTTGCCAGTTAGGGTCTTCACGAAGATTTG---CATTTT 3263749 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || || |||||||| ||||| || |||| |||||| |||| | ||| | |||||| Sbjct 3264191 AGAACCAGATGGAGAGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 3264132 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || || |||||||| | ||||||||| || || || || ||| Sbjct 3264131 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCC 3264072 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| ||||| |||||| | | || || |||| ||||| ||| Sbjct 3264071 TGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 3264012 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| || || || Sbjct 3264011 TTGCCGGTCAGGGTCTTCACGAAGATCTG 3263983 >seq692 Length=1323805 Score = 127 bits (140), Expect = 5e-24 Identities = 159/216 (74%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470 |||||||| || || || || | ||||||||||| | ||||||||||| |||||| | Sbjct 819836 AAGTCTCA--ACGAGATGAAGTG--GACTCCTTTTGAATGTTGTAGTCAGGCAAAGTACG 819891 Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 |||||||||||| ||||| || || ||||| | || ||||| || ||| |||| |||| Sbjct 819892 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAAACTCTGCTCATCAGGAGGAATTTCTTC 819951 Query 199531 TCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 ||||||||||| |||| ||| | || || | | ||| || || | | Sbjct 819952 CTTATCCTGAATCTTGGCTTTCATACTTTCTATTGTATCCGAGGGTTCAACCTCAACACT 820011 Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| ||||| || || || ||||||||||||||||| Sbjct 820012 GATGGTCTTTCCTGTAAGGGTTTTCACAAAAATTTG 820047 >seq525 Length=1461377 Score = 127 bits (140), Expect = 5e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| |||||||| || |||||||| |||| ||||||||||| || || | ||||| Sbjct 454208 CAGGACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 454149 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||||||||| || ||||| ||||| | | ||||||||| || || || ||| || Sbjct 454148 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTC 454089 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||| || |||| |||||| | | || || |||| ||||| || Sbjct 454088 CTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 454029 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| ||||| | || ||||| || || || Sbjct 454028 CTTGCCCGTCAAGGTCTTCACGAAGATCTG 453999 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || || |||||||| |||| ||||||||||| || || | |||||| Sbjct 453295 AGGACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 453236 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || ||||| ||||| | | ||||||||| || || || ||| ||| Sbjct 453235 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCC 453176 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| |||||| | | || || |||| ||||| ||| Sbjct 453175 TGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 453116 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| | || |||||||| || || Sbjct 453115 TTGCCCGTCAAGGTCTTCACAAAGATCTG 453087 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || || |||||||| |||| ||||||||||| || || | |||||| Sbjct 453523 AGGACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 453464 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || ||||| ||||| | | ||||||||| || || || ||| ||| Sbjct 453463 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCC 453404 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| |||||| | | || || |||| ||||| ||| Sbjct 453403 TGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 453344 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| | || ||||| || || || Sbjct 453343 TTGCCCGTCAAGGTCTTCACGAAGATCTG 453315 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || || |||||||| |||| ||||||||||| || || | |||||| Sbjct 453751 AGGACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 453692 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || ||||| ||||| | | ||||||||| || || || ||| ||| Sbjct 453691 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCC 453632 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| |||||| | | || || |||| ||||| ||| Sbjct 453631 TGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 453572 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| | || ||||| || || || Sbjct 453571 TTGCCCGTCAAGGTCTTCACGAAGATCTG 453543 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || || |||||||| |||| ||||||||||| || || | |||||| Sbjct 453979 AGGACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 453920 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || ||||| ||||| | | ||||||||| || || || ||| ||| Sbjct 453919 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCC 453860 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| |||||| | | || || |||| ||||| ||| Sbjct 453859 TGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 453800 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| | || ||||| || || || Sbjct 453799 TTGCCCGTCAAGGTCTTCACGAAGATCTG 453771 >seq969 Length=292708 Score = 100 bits (110), Expect = 7e-16 Identities = 147/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 |||| ||||| | ||| || ||||| |||| |||||| | |||||||||| |||| Sbjct 250762 CGAAATCTCAACATAAGATGAAGAGTGGACTACTTTTGAATGTTGTAGTCA----AAGTA 250817 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||||| ||||| || | |||||| || | ||| || || || || |||| Sbjct 250818 CATCCATCTTCCAGTTGCTTGCCAGTGAAGATCAGTCTCTGATGATCAAGAGGAAGTCCT 250877 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || ||||| ||| || ||| | || |||| | ||| | || | Sbjct 250878 TCTTTATCTTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAATCTCAAGA 250937 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCA 199616 ||||| |||| ||| | | |||||||| Sbjct 250938 GTGATAATCTTCCCCATAAAAGTTTTCA 250965 >seq331 Length=2979768 Score = 89.7 bits (98), Expect = 1e-12 Identities = 92/120 (77%), Gaps = 4/120 (3%) Strand=Plus/Plus Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470 |||||||| ||||| || ||| | |||| |||||| | |||||||||| |||| | Sbjct 1638118 AAGTCTCAACACAAGATGAAGAATGGACTACTTTTGAATGTTGTAGTCA----AAGTACA 1638173 Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 |||||||||||| ||||| || || ||||| || | ||| || || || ||||||||| Sbjct 1638174 TCCATCTTCCAGTTGCTTGCCAGCCAAGATCAGTCTCTGATGATCAAGAGGAATTCCTTC 1638233 >seq446 Length=4047392 Score = 84.2 bits (92), Expect = 5e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 ||||||| | ||||||||||| |||||| | |||||||||||| ||||| || || |||| Sbjct 3781833 CCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGA 3781892 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | | | |||||| || ||| ||||||| Sbjct 3781893 TCAATCTCTGCTGATCAGGAGGAATTCCT 3781921 >seq316 Length=5774657 Score = 84.2 bits (92), Expect = 5e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470 ||||| || | ||| || ||||| ||||||||||| | | | |||||| ||||| Sbjct 2701252 AAGTCGCAACAGAAGATGAAGAGTGGACTCCTTTTGAATGCTACAGTCAGATAAAGTATG 2701311 Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 |||||||||||| ||||| | | |||||| || | ||||| || ||| | |||||| Sbjct 2701312 TCCATCTTCCAGTTGCTTGCAAGAGAAGATCAGTCTGTGCTGATCAGGAGGAGTTCCTTT 2701371 Query 199531 TCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 ||||||||||| ||| || ||| | || || | ||| || || | || Sbjct 2701372 CTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCAAGGGTTCAACCTCGAGAGT 2701431 Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| |||| | | | | ||||||| ||||| || Sbjct 2701432 GATGATCTTCCTCATATGGGTTTTCATGAAAATCTG 2701467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178704345748661