Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq122 183 2e-40 seq983 178 1e-38 seq507 174 1e-37 seq203 172 4e-37 seq808 168 5e-36 seq66 143 2e-28 seq439 122 7e-22 seq692 98.7 8e-15 seq15 96.9 3e-14 seq338 93.3 3e-13 >seq122 Length=2516998 Score = 183 bits (202), Expect = 2e-40 Identities = 358/522 (69%), Gaps = 8/522 (2%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || ||||| || ||||| ||||||| | | | ||||| ||| Sbjct 1066971 GGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTTTTCTAGCACAGGAAAGTGGAA 1067030 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || |||||||| |||| || ||| |||| || ||| |||||| | || || || || Sbjct 1067031 ATAATTGCCAACAATCAGGGAAACTGAACCACCCCAAGTTATGTCGCCTTTACTGACACC 1067090 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGC--CACTGGTAATCCTACCAATACTA 550175 ||| || | |||||||| ||||| |||||| || || || || ||||| || Sbjct 1067091 GAATGATTGATCGGTGATGCTGCAAAGAATCAAGTTGCAATG--AACCCCACCAACACAG 1067148 Query 550176 TTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATA 550235 |||||||||| ||| |||||||| | || || | ||| | ||| || | |||| Sbjct 1067149 TTTTTGATGCCAAATACCTAATTGGACGTAGATTCGACGATGCTGTTGTCCAATCTGATA 1067208 Query 550236 TGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTC 550295 ||||||||||||| ||| | || |||| | |||| | || | || ||| || Sbjct 1067209 TGAAGCATTGGCCCTTCATGGTGGTGAATGATGCTGGCAGGCCCAAGATCCAAG-TAGAA 1067267 Query 550296 ATGAAGGATCTGTTAAACAATTTTCA-CCAGAACAAATTTCATCTATGGTTTTAATGAAA 550354 |||| | || | ||| | ||| | | | || ||||||||||| | || Sbjct 1067268 TACAAGGGAGAGACCAAAAGTTTCTATCCAAAGGAGGTATCTTCTATGGTTTTGACAAAG 1067327 Query 550355 ATGAAACAAA-CAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGT 550413 ||||| ||| || || |||| |||| | ||||| |||| ||| | || || Sbjct 1067328 ATGAAGGAAATCACAGAG-GCTTACCTTGGGAAGCCTGTTACCAATGCTGTAGTCACAGT 1067386 Query 550414 ACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGG 550473 ||| || ||||||||||| || || ||||| ||||| |||||||||||| |||||||| Sbjct 1067387 ACCTGCCTATTTTAATGATTCTCAGCGTCAGGCTACCAAAGATGCTGGAACTATTGCTGA 1067446 Query 550474 ACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGC 550515 |||||||| || || || || ||||| || || |||||||| Sbjct 1067447 TCTTAATGTACTACGAATCATGAATGAGCCAACCGCTGCTGC 1067488 >seq983 Length=695854 Score = 178 bits (196), Expect = 1e-38 Identities = 372/545 (68%), Gaps = 16/545 (3%) Strand=Plus/Minus Query 550049 AAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTC 550108 ||||| ||||| |||||||| ||||| || ||| |||| || ||| |||||| | || Sbjct 46632 AAAGTGGAAATAATTGCCAACGATCAGGGAAACTGAACCACCCCAAGTTATGTAGCCTTT 46573 Query 550109 ACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGC--CACTGGTAATCCTA 550166 || || ||||||| || | |||||||| ||||| |||||| || || || || | Sbjct 46572 ACTGACACTGAACGATTGATCGGTGATGCTGCAAAGAATCAAGTTGCAATG--AACCCCA 46515 Query 550167 CCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTC 550226 |||| || |||||||||| ||||| | | ||| | | ||| ||||| | ||| | Sbjct 46514 CCAACACAGTTTTTGATGCCAAACGCCTGACTGGGCGTGGATTTGATGATGCTGTTGTCC 46455 Query 550227 AGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTG 550286 | | ||||||||||| ||||| || | || |||| | |||| | || | | Sbjct 46454 AATCTGATATGAAGCACTGGCCCCTCATGGTGGTGAATGATGCTGGCAGGCCCAAGGTCC 46395 Query 550287 AAGCTACTCATGAAGGATCTGTTAAACAATTTTCA-CCAGAACAAATTTCATCTATGGTT 550345 ||| || |||| | || | ||| | ||||| | | || ||||||||| Sbjct 46394 AAG-TAGAATACAAGGGAGAGACCAAAAGTTTCTATCCAGAGGAGGTGTCTTCTATGGTT 46336 Query 550346 TTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGT 550404 || | || ||||| ||| || |||| |||| |||| ||||| |||| || Sbjct 46335 TTGACAAAGATGAAGGAAATCGCAGAGGCTTACCTTGGG-AAGACTGTTACCAATGCTGT 46277 Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 | | || ||||| || |||||||| | | || ||||| ||||| |||||||||||| Sbjct 46276 AGTCACAGTACCTGCCTATTTTAACAATGCTCAGCGTCAGGCTACCAAAGATGCTGGAAC 46217 Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATG------AACCTACTGCTGCTGCACT 550518 ||||||||| |||||||| ||| | || ||||| | | || ||||||||||| | Sbjct 46216 TATTGCTGGTCTTAATGTACTTTGAATCATCAAAGTACAGCAGCCAACTGCTGCTGCTAT 46157 Query 550519 TGCATATGGACTTGATAAACATAAT-GATCAAGAACTTAATGTACTCATCTTTGATTGTG 550577 ||| ||||| | || ||| | | || | | || ||||| || |||||||| | | Sbjct 46156 TGCTTATGGCTTAGAGAAAAAGGTTGGAGCCA-AAAGGAATGTGCTGATCTTTGACTTGG 46098 Query 550578 GAGGT 550582 ||||| Sbjct 46097 GAGGT 46093 >seq507 Length=1353185 Score = 174 bits (192), Expect = 1e-37 Identities = 383/563 (68%), Gaps = 11/563 (2%) Strand=Plus/Minus Query 550025 TGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGA 550084 ||||| ||||| | || | || ||||| ||||| |||||||| ||||| || ||| | Sbjct 695406 TGTGTGGGTGTCTTCCAGCACGGGAAAGTGGAAATAATTGCCAACGATCAGGGAAACCAA 695347 Query 550085 ACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAA 550144 || || ||| |||||| | || || || || |||| || |||||||||| ||||| Sbjct 695346 ACCACCCCAAGTTATGTCACCTTTACTGACACAGAACGATTGATTGGTGATGCTGCAAAG 695287 Query 550145 TATCAAGC--CACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAA 550202 |||||| || || || || ||| | || |||||||||| ||||| | | |||| Sbjct 695286 AATCAAGTTGCAATG--AACCCCACCGACACAGTTTTTGATGCCAAACGCCTGACTGGAC 695229 Query 550203 GAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTA 550262 | || ||| ||||| | ||| || | ||||||||||||||||| ||| || | Sbjct 695228 GTAGATTTGATGATGCTGTTGTCCAATCTGATATGAAGCATTGGCCCTTCATGGCGGTGA 695169 Query 550263 ATGTTTCTGGAAAACCTTATATTGAAGCTACTCATG-AAGGATCTGTTAAACAATTT-TC 550320 | | | |||| | || | | ||| || ||| |||| | || | ||| | Sbjct 695168 ACGATGCTGGCAGGCCCAAGGTCCAAG-TA-GAATGCAAGGGAGAGACCAAAAGTTTCTA 695111 Query 550321 ACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGT 550380 ||||| | | || | ||||||||| | || ||||| ||| || |||| | Sbjct 695110 TCCAGAGGAGGTGTCTTTTATGGTTTTGACAAAGATGAAGGAAATCGCAGAGGCTTACCT 695051 Query 550381 TGGTCAAGA-AGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAAC 550439 ||| | || ||||| |||| ||| | || ||||| || |||||||| || || || Sbjct 695050 TGG-GAGGACTGTTACCAATGCTGTAGTCACAGTACCTGCCTATTTTAACGATTCTCAGT 694992 Query 550440 GTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATG 550499 |||| ||||| |||||||||||| || |||| | ||||| || ||| | || |||| | Sbjct 694991 GTCAGGCTACCAAAGATGCTGGAACTACTGCTCGTCTTAAGGTACTTTGAATCATCACCG 694932 Query 550500 AACCTACTGCTGCTGCACTTGCATATGGACTTGATAAACATAATGATCAAGAACTTAATG 550559 | || ||||||||| | |||| ||||| | || ||| | || ||| |||| Sbjct 694931 AGCCCACTGCTGCTAC-TTTGCTTATGGCTTAGACAAAAAGGTTGGAGCCGAAAGGAATG 694873 Query 550560 TACTCATCTTTGATTGTGGAGGT 550582 | || |||||||| | |||||| Sbjct 694872 TGCTGATCTTTGACTTGGGAGGT 694850 Score = 105 bits (116), Expect = 5e-17 Identities = 259/391 (66%), Gaps = 4/391 (1%) Strand=Plus/Minus Query 552210 AATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAA 552269 || || ||||||||||| || || ||||| || | || ||||| || ||||||||| | Sbjct 694366 AACCCTGATGAGGCTGTCGCTTACGGTGCAGCTGTCCAGGCAGCCATCCTTTCTGGAGAC 694307 Query 552270 ACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTA 552329 | ||||||| | ||| | | | || | ||||| |||| ||| |||||||| | Sbjct 694306 AAATATGAAAATGTTCAAGGTTTGCTGCTGTTGGATGTCACTCGTCTTTCTCTTGGCGTT 694247 Query 552330 GAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAA 552389 ||||| | || || | |||||| ||| ||| | | |||||||| |||||| ||| Sbjct 694246 GAAACTGCCGGTGGAGTCATGACTGTTCTCATCAAGCGCAATACTACCATTCCTACCAAA 694187 Query 552390 AAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTT 552449 | | | || || | || || || || || ||| ||| | || ||| | Sbjct 694186 CAGACCCAAACCTTCACTTCCTACTCTGACAACCAGCCTGGTGTGCTCACTCGGGTTTAT 694127 Query 552450 GAAG--GAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAG 552507 |||| ||| | | | | || || |||| || | |||||| | ||| | | || Sbjct 694126 GAAGGTGAGCATGCCA--TGACCAAGAATAACAACCTACTTGGCAAGTTTGAACTCACAG 694069 Query 552508 GTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCA 552567 | || |||||| || | ||| || || || ||||| || || || ||||| ||| | | Sbjct 694068 GCATATGTCCTGCCCCCCATGGTGTTCCTCAGATTGAGGTCACCTTTGATATTGATACTA 694009 Query 552568 ATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 |||| ||| | ||||| ||||| ||||| Sbjct 694008 ATGGCATTCTCAATGTCTCTGCTGTGGATAA 693978 >seq203 Length=2358883 Score = 172 bits (190), Expect = 4e-37 Identities = 399/591 (68%), Gaps = 28/591 (5%) Strand=Plus/Plus Query 550001 ATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATT 550060 || ||| | || ||||| || ||||| ||||| | || | || ||||| ||||| Sbjct 1894688 ATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTCTTCCAGCACGGGAAAGTGGAAATA 1894747 Query 550061 ATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAA 550120 |||||||| ||||| || ||| |||| || ||| |||||| | || || || |||||| Sbjct 1894748 ATTGCCAACGATCAGGGAAACCGAACCACCCCAAGTTATGTCACCTTTACTGACACTGAA 1894807 Query 550121 CATTTAGTTGGTGATGCAGCAAAATATCAAGC--CACTGGTAATCCTACCAATACTATTT 550178 | || ||||| ||||| |||||| || || ||||| ||| || ||| Sbjct 1894808 CTATT-------GATGCTGCAAAGAATCAAGTTGCAATG--AATCC---CAACACAGTTT 1894855 Query 550179 TTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGA 550238 ||||||| |||| | | |||||| | || ||| | || | | || | ||||||| Sbjct 1894856 TTGATGCCAAACATCTGATTGGAGGTAGATTTGACAATGCTGTCATCCAATCTGATATGA 1894915 Query 550239 AGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC----TACT 550294 |||||||||| ||| | || || | | |||| | || | | ||| ||| Sbjct 1894916 AGCATTGGCCCTTCATGGTGGTGAACGATGCTGGCAGGCCCAAGGTCCAAGTAGAATACG 1894975 Query 550295 CATGAAG-GATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAA 550353 | |||| || | ||| || | ||||| | | || ||||||||||| | || Sbjct 1894976 -AGGAAGAGACC----AAAAGTTTCTATCCAGAGGAGGTGTCCTCTATGGTTTTGACAAA 1895030 Query 550354 AATGAAACAAA-CAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTAATAACT 550411 ||||| ||| || || |||| |||| |||| ||||| |||| ||| | || Sbjct 1895031 GATGAAGGAAATCACAGAG-GCTTACCTTGGG-AAGACTGTTACCAATGCTGTAGTCACA 1895088 Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471 ||||| || |||||||| |||| || | | | ||||| || |||||||| ||||||| Sbjct 1895089 GTACCTGCCTATTTTAACAACTCTCAGCATTAGGCTACCGAACATGCTGGAAATATTGCT 1895148 Query 550472 GGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTT 550531 || |||||||| || || || |||| ||| || ||||||||||| |||| ||||| | Sbjct 1895149 GGTCTTAATGTACTACGAATCATCAGTGAGCCAACTGCTGCTGCTATTGCTTATGGCTTA 1895208 Query 550532 GATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 || ||| | || ||| ||||| || |||||||| | |||||| Sbjct 1895209 GACAAAAAGGTTGGAGCTGAAAGGAATGTGCTGATCTTTGACTTGGGAGGT 1895259 Score = 165 bits (182), Expect = 7e-35 Identities = 455/687 (66%), Gaps = 14/687 (2%) Strand=Plus/Plus Query 551913 ACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTA 551972 ||||||||||| | |||| || | ||||| || | || || ||| |||||| || Sbjct 1895443 ACTGCTTGCGAGTGCACCAAGCGCACACTTTCTTCCAGCACCCAGGCCAGTATTGAGGTT 1895502 Query 551973 GATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGAT 552032 ||||| ||| ||| ||||| || | | |||| ||||| | | ||| |||||||| Sbjct 1895503 GATTCTCTATATGAAGGAATGGACTTTTATACCTCTATTACTCGTGCCTGGTTTGAAGAA 1895562 Query 552033 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCA 552092 | | |||| || || | | | || || ||||| ||| | | ||| | Sbjct 1895563 TTAAATGCTGACCTGTTCCGTGGCATCCTGGACCCTGTAGAGAAAGCCCTTCGGGATGCC 1895622 Query 552093 AAGATTGATAAATCCAAAGTACATGAAATTGTGCTTG-TTGGTGGATCTACAAGAATTCC 552151 ||| |||| || || | | || || ||||| |||| | ||||| ||| |||| || || Sbjct 1895623 AAGTTTGACAAGTCTCAGATCCACGATATTGT-CTTGATGGGTGGTTCTGCAAGTATCCC 1895681 Query 552152 TAAAATTCGCGAAATGTTA-AGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTA 552210 || |||| || | || | ||| ||||||||| || || | ||| | || | | Sbjct 1895682 CAAGATTCAGAAACTTCTACAAGACTT-TTTCAATGGGAAGGAACTGAATAAGAGCATCA 1895740 Query 552211 ATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCT----ATTCTTTCTG-- 552264 | || ||||||||||| || |||||||| || | || |||||| || ||||||| Sbjct 1895741 ACCCTGATGAGGCTGTCGCTTATGGTGCAGCTGTCCAGGCAGCTGTCCATCCTTTCTGGA 1895800 Query 552265 GACAAA-CTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTT 552323 |||||| |||| || ||| ||| || | | || | ||||| |||| ||| |||||| Sbjct 1895801 GACAAATCTGA--AAGTACT-CAAGATTTGCTGCTGTTGGATGTCACTCGTCTTTCTCTT 1895857 Query 552324 GGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCT 552383 | | ||| | | ||| || | |||||| ||| ||| | |||||||| |||||| Sbjct 1895858 CGCATTGAAGCTGCTGGTGGAGTCATGACTGTTCTCATCAAGCACAATACTACCATTCCT 1895917 Query 552384 TGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAA 552443 ||| | | | || |||| || || || || || ||| ||| ||||| Sbjct 1895918 ACCAAACATACCCAAACCTTCACTACCTACTCTGACAACCAGCCTGGTGTGCTCATTCAG 1895977 Query 552444 ATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTA 552503 ||| |||||| || | | || || ||||| || | |||||| | ||| | | Sbjct 1895978 GTTTATGAAGGTGAGCGTGCCATGACCAAGGATAACAACCTACTTGGCAAGTTTGAACTC 1896037 Query 552504 GAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGAT 552563 ||| || |||||||| || | || || || || |||| || || || ||||| ||| Sbjct 1896038 ACAGGCATACCTCCTGCCCCCTGGGGTGTTCCTCAGATTGGGGTCACCTTTGATATTGAT 1896097 Query 552564 GCCAATGGAATTTTGAATGTGACTGCT 552590 || ||||| ||| | ||||| ||||| Sbjct 1896098 GCTAATGGCATTCTCAATGTCTCTGCT 1896124 >seq808 Length=258708 Score = 168 bits (186), Expect = 5e-36 Identities = 372/552 (67%), Gaps = 12/552 (2%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || || || || | || ||||| || ||||| || || | || | ||||| Sbjct 11890 GCCATTGGCATCGACCTGGGCACCACCTACTCATGTGTGGGGGTGTTCCAGCACGGTAAG 11949 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || || ||||||||||| || || ||| | || || || ||||| | ||||| Sbjct 11950 GTAGAGATCATTGCCAATGACCAGGGCAACCGCACCACCCCCAGCTATGTGGCCTTCACC 12009 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTACC 550168 || || |||| | |||| ||||| || || | || ||||| || ||||| Sbjct 12010 GACACGGAACGGCTCATTGGGGATGCGGCCAAGAACCAGGTAGCCA-TG--AATCCCCAG 12066 Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228 || ||| | ||||| || |||||| | ||||| || | ||||||||| | || ||| Sbjct 12067 AACACTGTCTTTGACGCCAAACGTCTGATTGGCAGGAAATTTAATGATCCTGTAGTGCAG 12126 Query 550229 GCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAA 550288 ||||||||||| || |||||||| ||| | | |||| || || || | | | Sbjct 12127 GCAGATATGAAACACTGGCCTTTTCAAGTAATCAATGAAGGAGGCAAGCCCAAGGTAACA 12186 Query 550289 GCTACTCATGAAGGATCTGTTAAACAAT-TTTCA--CCAGAACAAATTTCATCTATGGTT 550345 | | | |||| | ||| || |||| || || |||| || |||||||| Sbjct 12187 GTGTCCTACAAAGGG---GAGAAAAAAGCTTTCTATCCTGAGGAAATCTCTTCTATGGTA 12243 Query 550346 TTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTA 550405 | | || ||||| | || || || ||| | || || || || |||| || Sbjct 12244 CTGACAAAGATGAAGGAGACTGCTGAGGCCTTTTTGGGCCACCCTGTCACCAATGCTGTG 12303 Query 550406 ATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT 550465 |||||||| ||||| ||||| ||||| || || |||||||| || || ||||| || Sbjct 12304 ATAACTGTGCCAGCTTATTTCAATGATTCTCAGCGTCAAGCCACCAAGGATGCAGGTGTG 12363 Query 550466 ATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525 ||||| || || ||||| || | |||||||||||||| || |||||||| |||||||| Sbjct 12364 ATTGCGGGTCTGAATGTGCTAAGAATTATCAATGAACCCACAGCTGCTGCCATTGCATAT 12423 Query 550526 GGACTTGATAAA 550537 || | |||||| Sbjct 12424 GGCTTAGATAAA 12435 >seq66 Length=2327887 Score = 143 bits (158), Expect = 2e-28 Identities = 286/421 (68%), Gaps = 2/421 (0%) Strand=Plus/Minus Query 552179 TTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGC 552238 |||| |||| || || | ||| | || |||| || ||||||||||| | |||||||| Sbjct 480363 TTTCTATGGGAAGGAACTGAATAAGAGCATTAACCCTGATGAGGCTGTCACTTATGGTGC 480304 Query 552239 CGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACT 552298 || | || ||||| || ||||||||| | | |||||| | ||| || | | || Sbjct 480303 AGCTGTCCAGGCAGCCATCCTTTCTGGAGACAAATCTGAAAATGTTCAAGATTTGCTGCT 480244 Query 552299 TGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCT 552358 | ||||| ||||| || |||||||| | |||| | ||| || | |||||| ||| Sbjct 480243 GTTGGATGTCACTCCCCTTTCTCTTGGCATTGAAAATGCTGGTGGAGTCATGACTGTTCT 480184 Query 552359 TATCGATAGAAATACTACTATTCCTTGTAAA-AAATCTCGTGTATTTTCTACGTATTCAG 552417 | | | | |||||||| |||||| ||| | | || | | || |||| |||| | Sbjct 480183 CACCAAGCGTAATACTACCATTCCTACCAAACAGACCTAGACT-TTAACTACCTATTTTG 480125 Query 552418 ATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATA 552477 | || || ||| ||| ||||| ||| |||||| || || | || || | || Sbjct 480124 ACAACCAGCCTGGTGTGCTCATTCAGGTTTATGAAGGTGAGCGAGCCATGACCAAGGGTA 480065 Query 552478 ATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGC 552537 | || | |||||||| ||| | | ||| || ||||||| || | ||| | || | Sbjct 480064 ACAACCTACTTGGTAAGTTTGAACTCACAGGCATACCTCCTGTCCCCCATGGCATTCCTC 480005 Query 552538 AAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATA 552597 | ||||| || || || ||||| ||||| ||||| ||| | ||||| ||||| |||| Sbjct 480004 AGATTGAGGTCACCTTTGATATTGATGCTAATGGCATTCTCAATGTCTCTGCTGTGGATA 479945 Query 552598 A 552598 | Sbjct 479944 A 479944 >seq439 Length=4022111 Score = 122 bits (134), Expect = 7e-22 Identities = 102/125 (82%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| |||| ||| | || ||||| || |||||||| || || || ||||| ||||| Sbjct 2427112 GTTACTAATGCTGTAGTCACAGTACCTGCCTATTTTAACGATTCTCAGCGTCAGGCTACC 2427171 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 |||||||||||| ||||||||| |||||||| ||||| || |||||||| || || ||| Sbjct 2427172 AAAGATGCTGGAACTATTGCTGGTCTTAATGTACTTCGAATCATCAATGAGCCAACAGCT 2427231 Query 550511 GCTGC 550515 ||||| Sbjct 2427232 GCTGC 2427236 >seq692 Length=1323805 Score = 98.7 bits (108), Expect = 8e-15 Identities = 150/211 (71%), Gaps = 6/211 (3%) Strand=Plus/Plus Query 563266 ACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCA 563325 || |||||||| | ||| |||| ||| ||||| |||| | ||| | | |||||| Sbjct 819844 ACGAGATGAAGTGGACTCCTTTTG--AATGTTGTAGTCAGGCAAAGTACGTCCATCTTCC 819901 Query 563326 AGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGA 563385 ||||| || || ||||| || | || |||| ||||||||||||| |||| ||||| ||| Sbjct 819902 AGTTGCTTGCCAGCAAAGATCAAACTCTGCTCATCAGGAGGAATTTCTTCCTTATCCTGA 819961 Query 563386 ATTTTTTGTTT--TACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTT 563443 || || ||| |||| || |||||||| | | | | || | | | | || | Sbjct 819962 ATCTTGGCTTTCATACT--TTCTATTGTATCCGAGGGTTCAACCTCAACACTGATGGTCT 820019 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || ||||| ||||| || ||||||||||| Sbjct 820020 TTCCTGTAAGGGTTTTCACAAAAATTTGCAT 820050 >seq15 Length=4502700 Score = 96.9 bits (106), Expect = 3e-14 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| ||||||| | ||||||||||| ||||| ||||| | ||||| || || || Sbjct 2597154 GTTACCCATGCAGTTGTTACTGTACCAGCCTATTTCAATGATGCCCAACGCCAGGCAACC 2597095 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACC 550503 |||||||||||| |||||||||| | |||||| | | || |||||||| || Sbjct 2597094 AAAGATGCTGGAACTATTGCTGGATTGAATGTTATGAGAATCATCAATGAGCC 2597042 >seq338 Length=7395759 Score = 93.3 bits (102), Expect = 3e-13 Identities = 184/270 (68%), Gaps = 2/270 (1%) Strand=Plus/Plus Query 552114 CATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGT 552173 ||||| ||||| || || ||||| |||| ||||| || || || | || | Sbjct 3131429 CATGATATTGTCCTGGTGGGTGGTTCTATCCATATTCCCAAGTTTATAGACTTCTTCAAG 3131488 Query 552174 TCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTAT 552233 ||| || |||||| || || | ||| | | | || || ||||| |||||||| ||| Sbjct 3131489 ACTTCTT-CAATGGAAAGGAACTGAATAAGACCATCAACCCTGATGAAGCTGTTGCTTAT 3131547 Query 552234 GGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATT 552293 | ||| || || ||||| |||||||||||| ||| |||||| | ||| || | Sbjct 3131548 GATGCAGCTGCCCAGGCAGCCATTCTTTCTGGAGAAATATCTGAAAATGTTCAAGATTTG 3131607 Query 552294 GTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACT 552353 | || | |||| |||||||| |||||||| | ||||| | | |||| | |||||| Sbjct 3131608 CTGCTGTTGAATGTCACTCCTCTTTCTCTTGGCATTGAAACTGGTAGAGGAGTCATGACT 3131667 Query 552354 AATCTTATCGATAGAAATACTACTATTCCT 552383 |||||| | | |||| || |||||| Sbjct 3131668 -GCCTTATCAAGGGCGATACCACCATTCCT 3131696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028535362092670