Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_016447.1 Length=219474 Score E Sequences producing significant alignments: (Bits) Value seq533 96.9 5e-15 >seq533 Length=971543 Score = 96.9 bits (106), Expect = 5e-15 Identities = 158/223 (71%), Gaps = 10/223 (4%) Strand=Plus/Plus Query 197419 ACAGATATTGAGAACGTGGCTTGGAACGG-CCCTAAAATCGCTTTAGCATTTGCCAATCC 197477 ||||| |||||| |||| | ||||| || ||| ||||| ||| | || || || | || Sbjct 511706 ACAGAGATTGAGCACGTCACCTGGAATGGTCCCCAAAAT-GCTCTTGCTTTAGC-AGTCA 511763 Query 197478 TAAAGAC----GTTACCATAATGGATAAAAGCTACCAGGGTCGTGTCAACATTAGCCAAA 197533 | | || |||| ||| ||||| |||||||||||| || | ||||| ||| Sbjct 511764 CAGAAACACAAGTTATCATTATGGACAAAAGCTACCAGAACCGACTGAACATCAGC---T 511820 Query 197534 CCAACTACTCTTTGTGCATTAGGAACCTGACCGTGAATGATGCTGGTTCGTATAAGGCCC 197593 |||||||| |||| || || |||||||| |||| || || || || || || |||| Sbjct 511821 GGAACTACTCCTTGTCTATCAGCAACCTGACTTTGAAAGACGCAGGATCCTACAAAGCCC 511880 Query 197594 AAATTAACAAAAATAATTCCCAAGTCACCACCAAGGAGGAATT 197636 | || ||| || ||||| ||||||||| | |||||||| Sbjct 511881 AGATAAACCCCAAGAATTCTAAAGTCACCATTGATGAGGAATT 511923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 702062555231120