Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq969 86.0 5e-12 seq525 84.2 2e-11 >seq969 Length=292708 Score = 86.0 bits (94), Expect = 5e-12 Identities = 141/203 (69%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 |||||| || || | ||||| || ||||| || | ||| | |||| |||| ||| Sbjct 250779 ATGAAGAGTGGACTACTTTTGAATGTTGTAGTC----AAAGTACATCCATCTTCCAGTTG 250834 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || | || |||| | ||| ||||| | |||| |||||||||||||| || || Sbjct 250835 CTTGCCAGTGAAGATCAGTCTCTGATGATCAAGAGGAAGTCCTTCTTTATCTTGGATCTT 250894 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 |||||| |||||| || || || | ||| | |||||||||| | || || | Sbjct 250895 GGCCTTTACATTTTCTATTGTATCTGAGGGTTCAATCTCAAGAGTGATAATCTTCCCCAT 250954 Query 101446 TAAAGTTTTTACAAATATCTGCA 101468 |||||||| | | ||||||| Sbjct 250955 AAAAGTTTTCATGGAAATCTGCA 250977 >seq525 Length=1461377 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || || || || || || || || ||||| || | | || | |||| |||| || Sbjct 453286 TGCAGCGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGT 453227 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| ||||| | ||| || || || || ||||| ||||| || || || || Sbjct 453226 TTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTGGATCTTC 453167 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | |||||| | ||||| || || |||| || ||||| || Sbjct 453166 GCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTC 453107 Query 101447 AAAGTTTTTACAAATATCTGCATGGT 101472 || || || ||||| ||||||||||| Sbjct 453106 AAGGTCTTCACAAAGATCTGCATGGT 453081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396208935244731