Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq692 93.3 8e-14 seq969 87.8 4e-12 >seq692 Length=1323805 Score = 93.3 bits (102), Expect = 8e-14 Identities = 144/203 (71%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 192338 AAGTAGCCTC-TTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTA 192396 |||| | ||| ||| || || || || |||| || || ||| |||| |||| ||| || Sbjct 819852 AAGTGGACTCCTTTTGA-ATGTTGTAGTCAGGCAAAGTACGTCCATCTTCCAGTTGCTTG 819910 Query 192397 CCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTT 192456 ||||||||||| || ||||| | |||||| || ||| |||| ||||| || || || | Sbjct 819911 CCAGCAAAGATCAAACTCTGCTCATCAGGAGGAATTTCTTCCTTATCCTGAATCTTGGCT 819970 Query 192457 TTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAAT 192516 || | | | ||| | ||| || | ||| || || | | | ||||| || || || | Sbjct 819971 TTCATACTTTCTATTGTATCCGAGGGTTCAACCTCAACACTGATGGTCTTTCCTGTAAGG 820030 Query 192517 GTTTTAATAAATATCTGCATTTT 192539 ||||| | ||| || ||||| || Sbjct 820031 GTTTTCACAAAAATTTGCATCTT 820053 >seq969 Length=292708 Score = 87.8 bits (96), Expect = 4e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439 |||| |||| ||| || |||| ||||| | |||||| |||||| | || | |||||||| Sbjct 250822 CATCTTCCAGTTGCTTGCCAGTGAAGATCAGTCTCTGATGATCAAGAGGAAGTCCTTCTT 250881 Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499 ||||||| || || |||||||| ||| | |||||| | ||| | || ||||| | Sbjct 250882 TATCTTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAATCTCAAGAGTGA 250941 Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCA 192535 | | || || | || ||||| || | ||||||| Sbjct 250942 TAATCTTCCCCATAAAAGTTTTCATGGAAATCTGCA 250977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984298577872050