Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq969 86.0 1e-11 >seq969 Length=292708 Score = 86.0 bits (94), Expect = 1e-11 Identities = 163/237 (69%), Gaps = 6/237 (3%) Strand=Plus/Plus Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCT-CTTTAGAAATAT 171891 |||| || || |||| | || || || | | ||| | ||| | || |||| ||| | | Sbjct 250746 TTTCTTAGTAACACCACGAAATCTCAACATAAGATGAAGAGTGGACTACTTTTGAA-TGT 250804 Query 171892 TATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTT 171951 | || || |||| | | | || |||| ||| || |||| || || | |||||| | Sbjct 250805 TGTAGTC----AAAGTACATCCATCTTCCAGTTGCTTGCCAGTGAAGATCAGTCTCTGAT 250860 Query 171952 GGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTG 172011 | ||| | || | ||||||||||||||| || || |||||||| ||| ||||||| Sbjct 250861 GATCAAGAGGAAGTCCTTCTTTATCTTGGATCTTGGCCTTTACATTTTCTATTGTATCTG 250920 Query 172012 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCA 172068 | | ||| | || ||||| || | || || | || ||||| ||| | ||||||| Sbjct 250921 AGGGTTCAATCTCAAGAGTGATAATCTTCCCCATAAAAGTTTTCATGGAAATCTGCA 250977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904973267861400