Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq292 107 6e-18 >seq292 Length=2472376 Score = 107 bits (118), Expect = 6e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666 |||||| || ||| || ||||| || || || || || | ||||| ||||| ||||| Sbjct 1291213 ACCAGTCTCAGCTGTCTTGACAGCAGTGTCGATGAGCCCCTCGCGACCCCCCATGGCATG 1291154 Query 302667 GAAGAATAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCG 302725 |||||| | ||| || ||| || || | | ||||| |||| ||||| || || Sbjct 1291153 GAAGAAGAACTCGGTGGG-CGTGAGGCCGGCCAGGTAGGAGTTCTCCACGAAGCCTCGGC 1291095 Query 302726 CCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATG 302785 ||||||| | |||| |||| | ||||| |||||||||| || || ||||| | | Sbjct 1291094 TCTCGGGCCCGTAGTCGTCCTTGATGAAGTGGGGCAGGGTCCGGTGCTTGAAGCCGAACG 1291035 Query 302786 GGATACGCTTTCCATCAACGTTCTGCTGTCC 302816 |||| ||||| || || ||||||||||| || Sbjct 1291034 GGATCCGCTTGCCCTCTACGTTCTGCTGCCC 1291004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471546370233071