Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq525 122 8e-23 seq692 91.5 1e-13 seq969 82.4 7e-11 >seq525 Length=1461377 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || || || || || || || || || ||| Sbjct 453996 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 454055 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| |||||||| || || || || || || Sbjct 454056 GACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAG 454115 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||||||||||||||||||| ||| | | | | |||| || || ||| Sbjct 454116 CAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 454175 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || || ||| |||| |||| ||| | ||||| Sbjct 454176 ATCCAGAAGGAGTCCACGCTCCACCTGGTCCTGCGCTTGAGGGGAGG 454222 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || |||||||||||| | || || | || || || || || || || || || || || Sbjct 453081 ACCATGCAGATCTTTGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCC 453140 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | || | || || |||||||| |||||||| || || || || || Sbjct 453141 AGTGACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGAC 453200 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || | |||||||||||||||||||||||||| ||| | | | | |||| || || Sbjct 453201 CAGCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTAC 453260 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| || ||||| || || || ||| |||| Sbjct 453261 AACATCCAGAAGGAGTCCACGCTGCACCTGGT 453292 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || || || || || || || || || ||| Sbjct 453312 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 453371 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| |||||||| || || || || || || Sbjct 453372 GACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAG 453431 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||||||||||||||||||| ||| | | | | |||| || || ||| Sbjct 453432 CAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 453491 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || || ||| |||| Sbjct 453492 ATCCAGAAGGAGTCCACGCTGCACCTGGT 453520 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || || || || || || || || || ||| Sbjct 453540 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 453599 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| |||||||| || || || || || || Sbjct 453600 GACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAG 453659 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||||||||||||||||||| ||| | | | | |||| || || ||| Sbjct 453660 CAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 453719 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || || ||| |||| Sbjct 453720 ATCCAGAAGGAGTCCACGCTGCACCTGGT 453748 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || || || || || || || || || ||| Sbjct 453768 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 453827 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| |||||||| || || || || || || Sbjct 453828 GACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAG 453887 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||||||||||||||||||| ||| | | | | |||| || || ||| Sbjct 453888 CAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 453947 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || || ||| |||| Sbjct 453948 ATCCAGAAGGAGTCCACGCTGCACCTGGT 453976 >seq692 Length=1323805 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || ||| | ||||| || || || || || || | | || || ||| || | Sbjct 820051 GATGCAAATTTTTGTGAAAACCCTTACAGGAAAGACCATCAGTGTTGAGGTTGAACCCTC 819992 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| |||||| | ||| ||||| || || || |||| ||| ||||| ||| | Sbjct 819991 GGATACAATAGAAAGTATGAAAGCCAAGATTCAGGATAAGGAAGAAATTCCTCCTGATGA 819932 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||||||||||||| || || || ||||| ||| | | || | || || || Sbjct 819931 GCAGAGTTTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGCCTGACTACAA 819872 Query 24883 CATTCAAAAGGAATCGAC 24900 |||||||||||| || || Sbjct 819871 CATTCAAAAGGAGTCCAC 819854 >seq969 Length=292708 Score = 82.4 bits (90), Expect = 7e-11 Identities = 153/223 (69%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764 ||||||| | || ||||| | | || || | ||| || || || | ||| || | | Sbjct 250977 TGCAGATTTCCATGAAAACTTTTATGGGGAAGATTATCACTCTTGAGATTGAACCCTCAG 250918 Query 24765 ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824 | ||| |||||| ||||| ||||||||||| ||||||||| | |||| ||||| | Sbjct 250917 ATACAATAGAAAATGTAAAGGCCAAGATCCAAGATAAAGAAGGACTTCCTCTTGATCATC 250858 Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884 | | ||||||| | || || || ||||| || | || || | || || |||| Sbjct 250857 AGAGACTGATCTTCACTGGCAAGCAACTGGAAGA-TGGATGTAC---TTTGACTACAACA 250802 Query 24885 TTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGG 24927 |||||||| | || || || || | ||||| |||| || || Sbjct 250801 TTCAAAAGTAGTCCACTCTTCATCTTATGTTGAGATTTCGTGG 250759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449816714035240