Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq525 84.2 2e-11 >seq525 Length=1461377 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || ||||| || || || || ||||| ||||| ||| | || |||| | | Sbjct 453084 ATGCAGATCTTTGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 453143 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || || ||||| || ||||| ||| | ||| || ||| Sbjct 453144 GACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAG 453203 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| | || | ||| || ||||||||||| || | || || | ||||||||| Sbjct 453204 CAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 453263 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGT 107764 || || |||||||| ||| ||||| |||| Sbjct 453264 ATCCAGAAGGAGTCCACGCTGCACCTGGT 453292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398806879763887