Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq1581 89.7 5e-13 >seq1581 Length=403015 Score = 89.7 bits (98), Expect = 5e-13 Identities = 112/151 (74%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 ||||| ||||| || | || || ||| | ||| |||| ||| |||| ||||| |||| Sbjct 376264 AGCATATGGGGACCAACGTGTGACGGCCTTGATCGCATCGTTGAGCGCTGTGACTTGCCC 376323 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244 ||| | || |||||||| ||| | | |||||||||||||| ||||||| || | || Sbjct 376324 GAGATGCACGTGGGCGATTGGATGCTCTTTGAAAACATGGGTGCTTACA-CTGTTGCTGC 376382 Query 21245 T-CTTCAACCTTTAACGGCTTCCCAAAGCCA 21274 | |||| || || ||||| |||| | |||| Sbjct 376383 TGCTTCTACTTTCAACGGGTTCCAGAGGCCA 376413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463462260295440