Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13]
14,383 sequences; 2,372,553,907 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq969 95.1 3e-14
seq692 95.1 3e-14
seq331 93.3 1e-13
seq649 91.5 3e-13
>seq969
Length=292708
Score = 95.1 bits (104), Expect = 3e-14
Identities = 132/185 (71%), Gaps = 4/185 (2%)
Strand=Plus/Minus
Query 206206 ATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAA 206265
|||||| | || | ||| || || ||| | ||| |||||| ||||| |||||
Sbjct 250942 ATCACTCTTGAGATTGAACCCTCAGATACAATAGAAAATGTAAAGGCCAAGATCCAAGAT 250883
Query 206266 AAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGAT 206325
||||||||| || | || ||| ||||| |||||| | || ||||| ||||||||
Sbjct 250882 AAAGAAGGACTTCCTCTTGATCATCAGAGACTGATCTTCACTGGCAAGCAACTGGAAGAT 250823
Query 206326 GGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
||| | ||||| || |||||| | || || |||| |||||||| ||| | ||||||
Sbjct 250822 GGATGTACTTT----GACTACAACATTCAAAAGTAGTCCACTCTTCATCTTATGTTGAGA 250767
Query 206386 CTTCG 206390
||||
Sbjct 250766 TTTCG 250762
>seq692
Length=1323805
Score = 95.1 bits (104), Expect = 3e-14
Identities = 148/207 (71%), Gaps = 10/207 (5%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || |||||||| || |||| | | || || ||| || || ||| | ||| |
Sbjct 820035 AAAACCCTTACAGGAAAGACCATCAGTGTTGAGGTTGAACCCTCGGATACAATAGAA--A 819978
Query 206245 GTA---AAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATC 206301
||| |||| || |||||| || || |||| |||| || || | || || | |||
Sbjct 819977 GTATGAAAGCCAA-GATTCAGGATAAGGAAGAAATTCCTCCTGATGAGCAGAGTTTGATC 819919
Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361
|| || || ||||| ||||||||||| | |||||| | || |||||| | || || |||
Sbjct 819918 TTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGCCTGACTACAACATTCAAAAGGAG 819859
Query 206362 TCTACTCTTCACCTTGTTTTGAGACTT 206388
|| | ||||| || | |||||||||
Sbjct 819858 TC--CACTTCATCTCG--TTGAGACTT 819836
>seq331
Length=2979768
Score = 93.3 bits (102), Expect = 1e-13
Identities = 107/144 (74%), Gaps = 4/144 (3%)
Strand=Plus/Minus
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| ||||| ||||| || ||||||||| | || ||| ||||| |||||
Sbjct 1638257 GTAAAGGCCAAGATCCAAGATAAGGAAGGAATTCCTCTTGATCATCAGAGACTGATCTTG 1638198
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||| ||||||||||| | ||||| || |||||| | || || ||||
Sbjct 1638197 GCTGGCAAGCAACTGGAAGATGGATGTACTTT----GACTACAACATTCAAAAGTAGTCC 1638142
Query 206365 ACTCTTCACCTTGTTTTGAGACTT 206388
| |||||| ||||| |||||||||
Sbjct 1638141 ATTCTTCATCTTGTGTTGAGACTT 1638118
>seq649
Length=3559941
Score = 91.5 bits (100), Expect = 3e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| |||| ||||| |||||| |||||
Sbjct 3263767 AAGACCCTAACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAAAAT 3263826
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || || || ||| || || || |||||
Sbjct 3263827 GTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCAGACCAGCAGAGGCTCATCTTT 3263886
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| |||||||||| | ||| | | ||||||||| |||||||||||||
Sbjct 3263887 GCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCG 3263946
Query 206365 ACTCTTCACCTTGTTTTG 206382
|| || ||||| ||| ||
Sbjct 3263947 ACCCTGCACCTGGTTCTG 3263964
Score = 91.5 bits (100), Expect = 3e-13
Identities = 137/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| |||| ||||| |||||| |||||
Sbjct 3263995 AAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAAAAT 3264054
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || || || ||| || || || |||||
Sbjct 3264055 GTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCAGACCAGCAGAGGCTCATCTTT 3264114
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| |||||||||| | ||| | | ||||||||| |||||||||||||
Sbjct 3264115 GCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCC 3264174
Query 206365 ACTCTTCACCTTGTT 206379
||||| || || |||
Sbjct 3264175 ACTCTCCATCTGGTT 3264189
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181603011477743
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |