Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq289 284 1e-71 seq196 181 1e-40 seq110 172 6e-38 seq688 125 8e-24 seq667 116 4e-21 >seq289 Length=10330243 Score = 284 bits (314), Expect = 1e-71 Identities = 255/320 (80%), Gaps = 0/320 (0%) Strand=Plus/Plus Query 171072 GTGGTGACCCAGGATGAGAGGGTGCTGCTGAACACGCCAGCCTCCCTGAAATGCTCCCTG 171131 ||||||||||| ||||| | |||||||||||| || || ||| | | |||||| ||| Sbjct 9458576 GTGGTGACCCAAGATGAAGAAGAGCTGCTGAACACACCTGCTTCCTTAAGATGCTCTCTG 9458635 Query 171132 CAGACTTCTCAGGAGGTGCTGATTGTCACCTGGCAGAAAATCAAGCCCACCATTCCAGAG 171191 || | ||| |||| || ||||||| || ||||||||||||||| | | ||||| Sbjct 9458636 CAAAATTCCGAGGAAGTCTTGATTGTGACATGGCAGAAAATCAAGGCTGTAAGCCCAGAA 9458695 Query 171192 AACATGATAACTTTTAGCAAAGACCACGGGGTGGTGGTCCAGCCGGCTTATAAGGACAAG 171251 |||||| | || || ||||| |||| ||||| || |||||||| || |||||||||||| Sbjct 9458696 AACATGGTCACCTTCAGCAAGAACCATGGGGTTGTAGTCCAGCCTGCCTATAAGGACAAG 9458755 Query 171252 ATAAACATCACCCAGCTTGGACTCCAAAACTCAACCATCACTTTTTGGAATACCACCTTA 171311 ||||||||||||||||| | |||| | ||||||||||| || || |||||||||||| | Sbjct 9458756 ATAAACATCACCCAGCTGGAACTCAAGAACTCAACCATTACATTCTGGAATACCACCCTG 9458815 Query 171312 GAGGACGAGGGGTGCTACAACTGCCTCTTTAACACCTTTGGGTCTGGGAAAATCTCGGGG 171371 ||||| || ||||| ||||| |||||||| || || ||||| || ||||| ||||| || Sbjct 9458816 GAGGATGAAGGGTGTTACAAGTGCCTCTTCAATACTTTTGGTTCCGGGAAGATCTCAGGA 9458875 Query 171372 GTGGCCTGCCTCACCCTCTC 171391 ||||||||||||||||| Sbjct 9458876 AAAGCCTGCCTCACCCTCTC 9458895 Score = 217 bits (240), Expect = 2e-51 Identities = 217/282 (77%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 171388 TCTCNGTGCAGCCCACTGTGTTTCTGCATTATAAATTTTTTGATGACCACCTGAACATCA 171447 || | || |||||||| ||||| || || ||||||||||| || |||||| | || |||| Sbjct 9461344 TCCCAGTACAGCCCACAGTGTTCCTTCACTATAAATTTTTCGAAGACCACGTAAATATCA 9461403 Query 171448 CCTGTTCTGCCAATGCCCGCCCGCCACCTCAGATTTTTTGGAAGATTTCGGGGTCAGAAA 171507 | || ||||||||||||||||| | ||| ||| | |||||| | || ||||||| | Sbjct 9461404 CTTGCTCTGCCAATGCCCGCCCAGCCCCTGTGATCTCCTGGAAGGTCTCTGGGTCAGGGA 9461463 Query 171508 TTGAAAACAGTAGCGAGGTTCTTTCCCATTCTAATGGAACTACTTCTGTAACCAGTGTAC 171567 |||||||||||| ||| |||| || || | ||||| || || ||||| || ||||| | Sbjct 9461464 TTGAAAACAGTACTGAGATTCTCTCACACCCCAATGGGACCACGTCTGTCACGAGTGTCC 9461523 Query 171568 TCCAAGTTAAAGACCCCAAGAGTCAGTTGGGAAAGGAGGTTATCTGCCAAGTGTGGCACC 171627 |||| || |||||||||||||| ||| |||| |||||||| |||||||| ||| |||| Sbjct 9461524 TCCAGGTCAAAGACCCCAAGAGCCAGGTGGGGAAGGAGGTAATCTGCCAGGTGCTACACC 9461583 Query 171628 TGGGAAATGTAACTAACTTAAGGGAAACTGTAAGCAAGGGTA 171669 |||| | | | || | | | ||| ||||| | ||| |||| Sbjct 9461584 TGGGGACTATGACCAGCGTCAGGCAAACTTTGGACAAAGGTA 9461625 >seq196 Length=3934615 Score = 181 bits (200), Expect = 1e-40 Identities = 544/825 (66%), Gaps = 41/825 (5%) Strand=Plus/Minus Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669 ||| || |||||||| || |||| || | |||||||| ||||| | | |||||| Sbjct 726040 GTATTCCCTGGTGTTCGTGGTTGGTCTGCTGGGCAATGCGATGGTGGTGGTGATCCTCAC 725981 Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729 ||| |||| ||||||| ||||||||||||||||||||||| |||| ||||| || ||| Sbjct 725980 AAAATACAGGAGGCTCCGGATCATGACCAACATCTTCCTGCTCAATTTGGCCATTTCTGA 725921 Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACTTCCACTCGGGGGGAACTGGTGG 8789 | |||| | | ||||| || | ||||||||||||| | | || ||||| |||| Sbjct 725920 CTTGCTCTTCCTGTTCACTCTGCTGTTTTGGATTCACTAC--AGCAGGTGGAACGAGTGG 725863 Query 8790 GTGGGACGCCGACCACCACATGTGTAAGTTTATAGTGGGCCTTTGCAACGTGGCACTGTA 8849 ||| || |||| |||||||||| | | || |||| || ||| |||| Sbjct 725862 GTG----TTCGGCCACTTCATGTGTAAGCTCCTCTCCGGGCTTTATTACATGGGCTTGTA 725807 Query 8850 CAGCGAAGTCCTGTTTATCATCCTGTTGACTCTGGACAGGTATCTTGCAGTTGTGTACGC 8909 |||||| | | || ||||||||| |||| | ||| |||| || || | || |||| Sbjct 725806 CAGCGAGATTTTCTTCATCATCCTGCTGACCATAGACCGGTACCTGGCCATCGTCCACGC 725747 Query 8910 GGTGGCTTACAGGCTGGTCCGCGTGGTACCAATAGGCATCCTCGCCAGCCTCCTGGCCTG 8969 ||| | || | ||| || | | || ||| || ||| |||| |||| Sbjct 725746 CGTGTTCGCCCTGCGGACCCGGACCGTCACTTTTGGTATCATCATGAGCGTCCTCACCTG 725687 Query 8970 GATTCTGGCTGTGTTGGGAACCATGCCAGAGTTTATCTTTTATGAATCC---AATAATGC 9026 | ||||| | | | | | || | || || |||||||| || | ||| ||| |||| Sbjct 725686 GGGCCTGGCAGGGATAGCAGCCCTCCCTGAATTTATCTTCCATCAGTCCCAAAATGATGC 725627 Query 9027 --CACAG-GCA--AGGGGGTCT-----GCCAAGCCTCCTACACAGACTTTTGGAAGGGGG 9076 |||| || | | || ||| | || | | || |||||| | Sbjct 725626 TGAACAGTACATCTGTTTGCCTCTTTATCCAGGAGGCCAAGA-GGATAACTGGAAGCGTT 725568 Query 9077 TTGATGTTACCAGCATGACCATGGTCACCCTCATCCTGCCTTTGCTTATCATGGCCTTCT 9136 | ||| | ||||||| ||| ||| || ||||||| |||| ||||||||| ||| Sbjct 725567 TCCATGCTCTGAGCATGAACATCCTCAGTCTGGCCCTGCCTCTGCTCATCATGGCCGTCT 725508 Query 9137 GCTACTGGAAAATCATCAAGGTCCTCCTCA-AGGCCCACAACAGGTCGAGAAACC---TG 9192 ||||| | ||| || | | || || | | |||| ||| | ||||| | Sbjct 725507 GCTACGCGGGAATTATTAGGACACTGCTGAGATGCCC-CAATA-------AAACCAAGTA 725456 Query 9193 C-ACGCCGTCAAGCTCATTTTGATCATGGTGGTGCTTTATTTTGTCTTTTGGATCCCCTA 9251 | | ||| || ||||||||| |||| ||||| | | ||| | || |||| |||||| Sbjct 725455 CAAGGCCATCCGGCTCATTTTTGTCATCATGGTGGTCTTTTTCATGTTCTGGACCCCCTA 725396 Query 9252 CAACGTCCTGCTCATTTTACACACCTACCAAGAGGCCATTTTTG-GGCCAGACTGTGAAG 9310 |||| | | ||| || | | | |||| | | | |||| || ||| ||||| Sbjct 725395 CAACCTGGTCCTCCTTCTCTCTGCTTTCCAAACGATCTTCTTTGAGGTCAG-TTGTGA-- 725339 Query 9311 CGCGGCGCA---GGGTGGACATGGCCCTCTTGGTGGCTGAGATGATCGCCTGCACCCACT 9367 || | ||| || | || ||||| | |||| | ||| ||||||||| ||| |||| Sbjct 725338 -GCAGAGCAAATGGCTCGATGTGGCCATGCAGGTGACAGAGGTGATCGCCTACACGCACT 725280 Query 9368 GCTGCGTCAACCCCGTCATCTACGCGTTTGTGGGCGAAAAGTTCC 9412 ||||||| ||||||||||||||||| || || || || | ||||| Sbjct 725279 GCTGCGTTAACCCCGTCATCTACGCCTTCGTCGGGGAGAGGTTCC 725235 Score = 122 bits (134), Expect = 1e-22 Identities = 253/373 (68%), Gaps = 8/373 (2%) Strand=Plus/Plus Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669 |||||| |||||||| | | || || | ||||| ||||||| || | ||||| || Sbjct 763174 GTACTCGCTGGTGTTCGTCGTCGGCCTGGTGGGCAACATCCTGGTGCTCTTGGTCCTGAT 763233 Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729 ||||||||||||||| || ||||||| ||||| ||| ||||||||||| | ||| Sbjct 763234 GCAGTACAAGAGGCTCAAGAGTATGACCAGCATCTACCTCCTCAACCTGGCCATCTCTGA 763293 Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACTTCCA-CTCGGGGGGAACTGGTG 8788 |||||| | | ||||| || ||||| |||||| ||| | | || || ||||| Sbjct 763294 CCTGCTTTTCCTCTTCACGCTGCCCTTCTGGATTGACTACAAGCTGAAGGATGACTGGAT 763353 Query 8789 GGTGGGACGCCGACCACCACATGTGTAAGTTTATAGTGGGCCTTTGCAACGTGGCACTGT 8848 | | || || |||| || ||| | | ||| |||| || | | ||| Sbjct 763354 TTTCAG-CGACG-GCACC-----TGCAAGCTGCTCTCGGGGCTTTATTACATAGGCTTGT 763406 Query 8849 ACAGCGAAGTCCTGTTTATCATCCTGTTGACTCTGGACAGGTATCTTGCAGTTGTGTACG 8908 ||||||| || | || ||||||||| |||| |||||||||| || || | ||| ||| Sbjct 763407 ACAGCGAGATCTTTTTCATCATCCTGCTGACGGTGGACAGGTACCTGGCCATCGTGCACG 763466 Query 8909 CGGTGGCTTACAGGCTGGTCCGCGTGGTACCAATAGGCATCCTCGCCAGCCTCCTGGCCT 8968 | ||| | || ||| ||| || | | ||| ||||| |||| | |||||| Sbjct 763467 CCGTGTTCGCCCTGCGGGTTCGCACCGTCCTCTTCGGCGTCCTCAGCAGCGCCGTGGCCT 763526 Query 8969 GGATTCTGGCTGT 8981 ||| ||||| || Sbjct 763527 GGAGCCTGGCCGT 763539 Score = 91.5 bits (100), Expect = 2e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 9323 TGGACATGGCCCTCTTGGTGGCTGAGATGATCGCCTGCACCCACTGCTGCGTCAACCCCG 9382 ||||| ||||| | |||| | ||| ||||||||| ||| ||||||||||||||||||| Sbjct 763890 TGGACGTGGCCATGCAGGTGACGGAGGTGATCGCCTACACGCACTGCTGCGTCAACCCCG 763949 Query 9383 TCATCTACGCGTTTGTGGGCGAAAAGTTCC 9412 ||||||| || || ||||| || | ||||| Sbjct 763950 TCATCTATGCCTTCGTGGGAGAGAGGTTCC 763979 >seq110 Length=1713729 Score = 172 bits (190), Expect = 6e-38 Identities = 137/165 (83%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| ||||| || | ||| || | ||||||||||||||| ||||||||||| |||||||| Sbjct 1660654 CTTCAGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAA 1660713 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 ||| || |||||||||||||| || |||||||||||||||||||| || || || |||| Sbjct 1660714 GGGTACACCCAGGCCCATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGTTCACCGTT 1660773 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 ||||||| |||||||| || |||||||| ||||| ||||| Sbjct 1660774 CACCACGTAGAACTGGCAAAGAGCATGGCACGGAGGCAGGGCCAT 1660818 >seq688 Length=229267 Score = 125 bits (138), Expect = 8e-24 Identities = 192/269 (71%), Gaps = 6/269 (2%) Strand=Plus/Minus Query 146867 TCAAA--ATCTTGAGCTTGGGGAAGGGTCGGGGGT-TC-CTGGCCAGCTGAATTTTCAGG 146922 ||||| ||||| ||||| |||| || | || | || ||| ||||| |||||||| Sbjct 106907 TCAAAGGATCTTAAGCTTCTGGAAAGGCCTTGGTTCTCACTGA--AGCTGCATTTTCAGC 106850 Query 146923 GGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGC 146982 |||| || || | ||||| | || || || |||| || || | ||||| ||| Sbjct 106849 AGCTCAACATGACTCAGGTAAATATGTGCATCTCCCAAAGTATGTATGAAGTCATTGGGC 106790 Query 146983 TTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAG 147042 || ||||| || | ||| ||| | ||||||||||||| | ||||||| | || || Sbjct 106789 TTCAGGCCTGTGATGTGTACCATCCTGTAGGTGAGCAGGGCATAGCTGGTGACACTGGAG 106730 Query 147043 GGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCG 147102 || || ||||||||||||| || || ||| |||||||||| || || ||||| || | Sbjct 106729 GGCACAACCAGGCCCATGTCTCCTGAGCTCCGGTACAGCTGACAGGACAGCTCACCATTT 106670 Query 147103 GCCACGTAAAACTGGCACAGGATGTGGCA 147131 ||| ||| |||||||| ||| ||||| Sbjct 106669 TCCAGGTAGAACTGGCAAAGGGAATGGCA 106641 Score = 82.4 bits (90), Expect = 9e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 147372 GGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGA 147431 |||||| | | ||||||||| ||||||||||| || || ||| || || ||||| Sbjct 106418 GGACCCATTTGAGTCCCAGATTTTCACTCCCTTGGAAGACAGTTCCCAAGCGTTTGTGGA 106359 Query 147432 GCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGT 147491 ||| ||| ||||| |||| |||||||||||| ||| || | | || ||||| || Sbjct 106358 TCCCTTGATAAACCACAGCAACTCCTCCAAAACACCCTTCTAGGATACAGGTTTGGTTGT 106299 Query 147492 CAGCAGGGGGAACTGGTCCC 147511 |||||| || || | |||| Sbjct 106298 CAGCAGAGGAAATTCATCCC 106279 >seq667 Length=4639459 Score = 116 bits (128), Expect = 4e-21 Identities = 111/143 (78%), Gaps = 12/143 (8%) Strand=Plus/Minus Query 178255 TGTCAGAGATGATTCAGTTTTACTTGGAGGAGGTGATGCCTCAGGCCGAGAATCACAGCG 178314 |||| |||||||| |||||||||||||||||||||||||| ||||| ||||| || Sbjct 1405787 TGTCCGAGATGATCCAGTTTTACTTGGAGGAGGTGATGCCCCAGGCTGAGAA------CG 1405734 Query 178315 GGGGTGGAGGCCCGGACATTAAGGAGCATGTAAACTCTCTGGGGGAAAAGCTAAAGACCC 178374 | | ||||||||| || |||| || ||||| ||||| |||||||| ||||||| Sbjct 1405733 AG------GACCCGGACATCAAACAGCACGTGAACTCCCTGGGAGAAAAGCTGAAGACCC 1405680 Query 178375 TTAGAGTGAGGCTGCGGCGATGT 178397 | | |||| |||||||| ||| Sbjct 1405679 TCCGGCTGAGACTGCGGCGCTGT 1405657 Score = 98.7 bits (108), Expect = 1e-15 Identities = 74/87 (85%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 178462 AGCTTCAAGAAAAGGGTGTTTACAAAGCTATGAGTGAGTTTGATATTTTTATTAACTACA 178521 |||| ||||| || ||||| |||||||| ||| |||||||||| || || || ||||||| Sbjct 1403499 AGCTCCAAGAGAAAGGTGTCTACAAAGCCATGGGTGAGTTTGACATCTTCATCAACTACA 1403440 Query 178522 TAGAAGCTTACATGACAACAAAAATGA 178548 |||||||||||||||||| || |||| Sbjct 1403439 TAGAAGCTTACATGACAATGAAGATGA 1403413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583383096151200