Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq649 113 4e-20 seq692 89.7 5e-13 >seq649 Length=3559941 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||||||||| | | || || | || ||||||||||| || ||||| Sbjct 3264171 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAA 3264112 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | || | || |||||| ||| |||||| ||||| | | Sbjct 3264111 GATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATT 3264052 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| || | |||||||||| ||||| || || || |||| || ||||| Sbjct 3264051 TTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 3263992 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 3263991 GAAGATCTGCAT 3263980 Score = 105 bits (116), Expect = 6e-18 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||||||||| | | || || | || ||||||||||| || ||||| Sbjct 3263943 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAA 3263884 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | || | || |||||| ||| |||||| ||||| | | Sbjct 3263883 GATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATT 3263824 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| || | |||||||||| ||||| || || || || | || ||||| Sbjct 3263823 TTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTTAGGGTCTTCAC 3263764 Query 35725 AAATATCTGCATTCTG 35740 || || |||||| || Sbjct 3263763 GAAGATTTGCATTTTG 3263748 >seq692 Length=1323805 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||||||||||||||| || | ||| || || | || ||||| ||||| || ||||| Sbjct 819859 CTCCTTTTGAATGTTGTAGTCAGGCAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAA 819918 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| | ||||| || | ||||| ||||| ||| ||||| |||| | | Sbjct 819919 GATCAAACTCTGCTCATCAGGAGGAATTTCTTCCTTATCCTGAATCTTGGCTTTCATACT 819978 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | || || | ||| ||||| || |||| || || || || | |||||||| Sbjct 819979 TTCTATTGTATCCGAGGGTTCAACCTCAACACTGATGGTCTTTCCTGTAAGGGTTTTCAC 820038 Query 35725 AAATATCTGCAT 35736 ||| || ||||| Sbjct 820039 AAAAATTTGCAT 820050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450712552945640