Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq386 170 3e-37 >seq386 Length=6704978 Score = 170 bits (188), Expect = 3e-37 Identities = 271/382 (71%), Gaps = 10/382 (3%) Strand=Plus/Plus Query 13659 TATCTCGTGAGGCCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTG 13718 ||| |||| |||||| || ||||||| ||||||||||| || || || || ||| Sbjct 14389 TATATCGTAGAGCCCCTTAGTAAAGAAGAGGCGGAGTTTCCCATTGCGTATTCTATAGTG 14448 Query 13719 ATCCACCACAAGATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAAC 13778 | || ||||| ||||| ||| | || | ||||||||||||||||| || ||||| Sbjct 14449 GTTCATCACAAAATCGAAATGCTTGACAGGCTCCTGAGGGCCATCTATATGCCTCAGAAT 14508 Query 13779 CTCTACTGCGTCCACGTGGACTCCAAGTCCGGCGA--CGAGTTCATCCGGGGCGTCTCGG 13836 ||||||||| | ||||||||| || || | || | || ||| | || || Sbjct 14509 CTCTACTGCATTCACGTGGACAGAAAATCAGAGGATTCCTTTTTGGCCGCG--GTGATGG 14566 Query 13837 CCATCGCCAGGTGCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACG 13896 ||||||| |||||| |||||| | ||||| | |||| | ||||||||| | Sbjct 14567 GCATCGCCTCCTGCTTCAGTAACGTCTTCGTGGCCAGTCAGCTGGAGAGCGTGGTGTATG 14626 Query 13897 GCTCCTGGAGTCGCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGAC-GCCTCCCCC 13955 ||| |||||||| || ||||||||||||| ||||||| ||||| || | | Sbjct 14627 CCTCTTGGAGTCGGGTTCAGGCCGACCTCAACTGCATGCAAGACCTCTACAGGAT---GA 14683 Query 13956 GT-CA-AGTGGAGGTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACC 14013 || || | ||||||||| || | || || ||||| ||||| ||||| | || ||||||| Sbjct 14684 GTGCAGACTGGAGGTACTTGATAAATCTTTGCGGCATGGATTTCCCTATTAAAACCAACC 14743 Query 14014 TGGAGATCGTGCGGGCGCTGAA 14035 ||||||| || ||| ||| || Sbjct 14744 TGGAGATTGTCCGGAAGCTCAA 14765 Score = 87.8 bits (96), Expect = 2e-12 Identities = 135/191 (71%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 14358 AAGTACGACACCTCGGACATGTGGGCCAAGGTCAGGTTCGTCAAGTGGCACTACTACGAG 14417 ||||| |||| || |||||| ||| | | ||||||||||||||||| |||| || Sbjct 15085 AAGTATGACATGTCTGACATGCAGGCGATTGCGAGGTTCGTCAAGTGGCAGTACTTTGAA 15144 Query 14418 GGGGATATCAAGAAAGGGGCCCTGTACCCGCCTTGCGACGGCATCCACGTCCACGCCATC 14477 || ||| || || ||||||| |||||||| ||| ||| ||||||| | | | Sbjct 15145 GGTGATGTCTCCAAGGGGGCCCCCTACCCGCCCTGCAGCGGGGTCCACGTGCGTTCTGTG 15204 Query 14478 TGCATCTTCGGGTCCGGCGACGTGAAGTGGCTG--AAGAGCGTCCCGCACCTGTTCGCCA 14535 || ||||||| | || ||| |||| ||| || | || | | ||| |||| |||| Sbjct 15205 TGTGTCTTCGGAGCAGGTGACTTGAACTGGATGCTACGAAAG--CACCACTTGTTTGCCA 15262 Query 14536 ACAAGTTCGAC 14546 ||||||| ||| Sbjct 15263 ACAAGTTTGAC 15273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658620766926080