Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq649 140 8e-28 seq525 136 9e-27 seq14383 122 2e-22 seq969 118 3e-21 seq331 116 9e-21 seq345 100 7e-16 seq194 96.9 8e-15 seq303 91.5 4e-13 seq891 87.8 4e-12 seq499 87.8 4e-12 >seq649 Length=3559941 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || || ||||||||||| ||||| |||| |||||||| | | ||| | |||||| Sbjct 3264191 AGAACCAGATGGAGAGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 3264132 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || | || ||||| || || || || ||||| || Sbjct 3264131 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCC 3264072 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| |||||||||||| || ||||| || | ||||| ||| Sbjct 3264071 TGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 3264012 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| || || | ||| | ||||| Sbjct 3264011 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 3263980 Score = 138 bits (152), Expect = 3e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||| || ||||| || || || ||||| |||| |||||||| | | ||| | ||||| Sbjct 3263964 CAGAACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATC 3263905 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| |||||||| || || ||||| || | || ||||| || || || || ||||| || Sbjct 3263904 TTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATC 3263845 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||||||| |||||||||||| || ||||| || | ||||| || Sbjct 3263844 CTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 3263785 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 |||||| || | || || | ||| | ||||||||| Sbjct 3263784 CTTGCCAGTTAGGGTCTTCACGAAGATTTGCATTTT 3263749 >seq525 Length=1461377 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| |||||||| ||||| || || |||| ||||| || | || || | |||||| Sbjct 454208 CAGGACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 454149 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| ||||| ||||| || ||||| | | || ||||| || || || || || ||||| Sbjct 454148 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTC 454089 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||| ||| ||||||||||| || ||||| || | ||||| || Sbjct 454088 CTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 454029 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||||| || || | ||| | ||||| Sbjct 454028 CTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 453996 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || ||||| || || |||| ||||| || | || || | ||||||| Sbjct 453523 AGGACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 453464 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| ||||| || ||||| | | || ||||| || || || || || ||||| Sbjct 453463 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCC 453404 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||||||||| || ||||| || | ||||| ||| Sbjct 453403 TGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 453344 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||||||||| || || | ||| | ||||| Sbjct 453343 TTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 453312 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || ||||| || || |||| ||||| || | || || | ||||||| Sbjct 453751 AGGACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 453692 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| ||||| || ||||| | | || ||||| || || || || || ||||| Sbjct 453691 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCC 453632 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||||||||| || ||||| || | ||||| ||| Sbjct 453631 TGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 453572 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||||||||| || || | ||| | ||||| Sbjct 453571 TTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 453540 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || ||||| || || |||| ||||| || | || || | ||||||| Sbjct 453979 AGGACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 453920 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| ||||| || ||||| | | || ||||| || || || || || ||||| Sbjct 453919 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCC 453860 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||||||||| || ||||| || | ||||| ||| Sbjct 453859 TGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 453800 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||||||||| || || | ||| | ||||| Sbjct 453799 TTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 453768 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || ||||| || || |||| ||||| || | || || | ||||||| Sbjct 453295 AGGACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 453236 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| ||||| || ||||| | | || ||||| || || || || || ||||| Sbjct 453235 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCC 453176 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||||||||| || ||||| || | ||||| ||| Sbjct 453175 TGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 453116 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||||||||| || || Sbjct 453115 TTGCCCGTCAAGGTCTT 453099 >seq14383 Length=17047 Score = 122 bits (134), Expect = 2e-22 Identities = 137/183 (75%), Gaps = 3/183 (2%) Strand=Plus/Plus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| ||||||| || || |||| || ||||| ||||| ||||||||||| | |||||| Sbjct 6393 CAAATTTACAATGTAATCGTTACAGCCCATGCTTTTGTAATGATTTTCTTCATAGTTATG 6452 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || |||| || || || ||||| || ||||| || || ||||||||||| |||||||| Sbjct 6453 CCTATTATAATTGGAGGATTCGGTAACTGATTGGTCCCATTAATGATTGGAGCTCCTGAC 6512 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGC---CTTCCTTATTT 7728 || || || || | | || |||||||| || || | || || | ||| |||| || Sbjct 6513 ATAGCATTCCCCCGAATGAATAATATAAGCTTCTGGCTCCTTCCTCCCTCTTTCTTACTT 6572 Query 7729 CTA 7731 ||| Sbjct 6573 CTA 6575 Score = 87.8 bits (96), Expect = 4e-12 Identities = 82/103 (80%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 370673 TCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGAT 370732 || || || |||||||||||||||| |||||| || | ||||||||| ||||| || | Sbjct 6964 TCTGGGTGGCCAAAAAATCAGAATAGATGTTGGTATAAGATAGGATCTCCTCCTCCAGCA 6905 Query 370733 GGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA-AACA 370774 ||||| || || | ||||| ||||||| ||| ||||| |||| Sbjct 6904 GGATCGAAGAATGTGGTATTTAAATTTCGATCTGTTAATAACA 6862 >seq969 Length=292708 Score = 118 bits (130), Expect = 3e-21 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||| ||||| | ||| || |||||||| | ||||| | ||||| || ||||| Sbjct 250761 ACGAAATCTCAACATAAGATGAAGAGTGGACTACTTTTGAATGTTGTAGTC----AAAGT 250816 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || ||||| |||| |||||| |||| || || || | |||| || Sbjct 250817 ACATCCATCTTCCAGTTGCTTGCCAGTGAAGATCAGTCTCTGATGATCAAGAGGAAGTCC 250876 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| || ||||||||||| ||| ||| ||| || || ||||||| ||| | || | Sbjct 250877 TTCTTTATCTTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAATCTCAAG 250936 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATG 225702 ||||| |||| ||| | |||||||| ||| Sbjct 250937 AGTGATAATCTTCCCCATAAAAGTTTTCATG 250967 >seq331 Length=2979768 Score = 116 bits (128), Expect = 9e-21 Identities = 161/225 (72%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 || |||||||| ||||| || ||| |||| | ||||| | ||||| || ||||| Sbjct 1638115 ACCAAGTCTCAACACAAGATGAAGAATGGACTACTTTTGAATGTTGTAGTC----AAAGT 1638170 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || ||||| ||||| ||||| |||| || || || | ||||| || Sbjct 1638171 ACATCCATCTTCCAGTTGCTTGCCAGCCAAGATCAGTCTCTGATGATCAAGAGGAATTCC 1638230 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| ||||||||||| ||| ||| ||| || | || ||| ||| | || | Sbjct 1638231 TTCCTTATCTTGGATCTTGGCCTTTACATTTTCTATTATATCCAAGGGTTCAATCTCGAG 1638290 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| |||| ||| | |||||||| ||| | | ||||| || Sbjct 1638291 AGTGATAATCTTCCCCATAAAAGTTTTCATGGAAATCTGCATCTT 1638335 >seq345 Length=2187959 Score = 100 bits (110), Expect = 7e-16 Identities = 125/170 (74%), Gaps = 1/170 (1%) Strand=Plus/Minus Query 7556 TTTACAACGTTATTATTACGGCGCATGCCTTTGT-TATGATTTTCTTTTTTGTTATGCCG 7614 |||| || || || | || || ||||||||||| || ||| ||||| | || || || Sbjct 169200 TTTATAATGTGGTTGTCACTGCCCATGCCTTTGTAAATAATTCTCTTTATGGTGATACCC 169141 Query 7615 GTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATG 7674 ||||||| || || | |||||| ||||| || || ||||| ||||| || || || ||| Sbjct 169140 ATTATGATTGGAGGATACGGAAACTGATTGGTACCATTAATAATTGGGGCACCCGACATG 169081 Query 7675 GCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTT 7724 || || || || | || ||||||| ||| ||| | || || || ||||| Sbjct 169080 GCATTCCCTCGGATAAATAATATAAATTTCTGACTTCTGCCTCCATCCTT 169031 >seq194 Length=5677166 Score = 96.9 bits (106), Expect = 8e-15 Identities = 147/209 (70%), Gaps = 8/209 (4%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 |||| || ||||| ||||||||||| || ||||| | ||||| | |||||| | Sbjct 189053 AGTCCCAACACAAGATGGAGAGTGGACTCCTTTTGAATGTTGTA----GTCAAAGTACAT 189108 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| || ||||| ||||| ||||| ||| || || || || || |||| Sbjct 189109 CCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTCTGCTGATCAGGAAGA----GTTCC 189164 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 | || || ||||| ||||||| ||| || || | ||| | ||| || || | ||| Sbjct 189165 TGATCCTGAATCTTGGCCTTCACATTTTCTATTGTATTTGAAGGTTCAACCTCAAGAGTG 189224 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 || ||||| ||| | | |||||| | ||| Sbjct 189225 ATGGTCTTCCCCATAAGAGTTTTCACGAA 189253 >seq303 Length=5752584 Score = 91.5 bits (100), Expect = 4e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530 |||| || |||||||| || || || |||||||| || || |||||||| |||||||| Sbjct 2110256 AATACCTGTCCATCAGTGATGGAAATGACATTTGTTGGAATGTAAGCAGACACATCACCA 2110197 Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578 ||||||||||| | || ||||| || || | || ||||| |||||| Sbjct 2110196 GCTTGTGTTTCTATGACTGGTAAAGCAGTCAAGGAGCCACCGCCAAAA 2110149 >seq891 Length=1390736 Score = 87.8 bits (96), Expect = 4e-12 Identities = 82/103 (80%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 370673 TCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGAT 370732 || || || |||||||||||||||| |||||| || | ||||||||| ||||| || | Sbjct 1174295 TCTGGGTGGCCAAAAAATCAGAATAGATGTTGGTATAAGATAGGATCTCCTCCTCCAGCA 1174354 Query 370733 GGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA-AACA 370774 ||||| || || | ||||| ||||||| ||| ||||| |||| Sbjct 1174355 GGATCGAAGAATGTGGTATTTAAATTTCGATCTGTTAATAACA 1174397 >seq499 Length=1547906 Score = 87.8 bits (96), Expect = 4e-12 Identities = 82/103 (80%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 370673 TCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGAT 370732 || || || |||||||||||||||| |||||| || | ||||||||| ||||| || | Sbjct 1385299 TCTGGGTGGCCAAAAAATCAGAATAGATGTTGGTATAAGATAGGATCTCCTCCTCCAGCA 1385240 Query 370733 GGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA-AACA 370774 ||||| || || | ||||| ||||||| ||| ||||| |||| Sbjct 1385239 GGATCGAAGAATGTGGTATTTAAATTTCGATCTGTTAATAACA 1385197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192311437741802