Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq110 138 8e-28 >seq110 Length=1713729 Score = 138 bits (152), Expect = 8e-28 Identities = 129/164 (79%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || || |||| ||| || |||||||| ||||| || ||||||||||||||||| |||||| Sbjct 1660658 AGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGT 1660717 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || || || |||||||| || ||||||||||| ||||| || || || || || | Sbjct 1660718 ACACCCAGGCCCATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGTTCACCGTTCACC 1660777 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAG 27371 ||||| ||||| || | || ||||||||||| || ||||| || Sbjct 1660778 ACGTAGAACTGGCAAAGAGCATGGCACGGAGGCAGGGCCATCAG 1660821 Score = 82.4 bits (90), Expect = 6e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 27497 TGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTT 27556 |||| ||||| || ||||||||||| || || || || || || || | || || |||| Sbjct 1663381 TGTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATCCCCTTCTT 1663440 Query 27557 CCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCT 27616 | |||| ||| || ||||||| |||| || ||| || ||||| |||||||| | Sbjct 1663441 CTCTGTTGGAGAATCCTAGGCTGTCCAAGAAGTTTCGGGACCCATTGGCATCCCAGATTT 1663500 Query 27617 TTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 | || ||||| || || || || | |||||| || || Sbjct 1663501 TCACTCCCTTGGATGACAGTTCCTTAGCGTTTGTAGATCC 1663540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369442428043673