Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13]
14,383 sequences; 2,372,553,907 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq649 154 4e-32
seq525 141 2e-28
seq692 116 9e-21
seq194 104 6e-17
seq316 98.7 2e-15
seq102 84.2 5e-11
>seq649
Length=3559941
Score = 154 bits (170), Expect = 4e-32
Identities = 176/234 (75%), Gaps = 7/234 (3%)
Strand=Plus/Plus
Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969
|||| ||||||| |||| |||||||| || || || || || || |||||||| ||||
Sbjct 3263744 AGGTCAAAATGC---AAATCTTCGTGAAGACCCTAACTGGCAAGACCATCACCCTGGAGG 3263800
Query 177970 TGGAAAGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027
|||| || ||| |||||||||| || || || ||||| ||||| || || || ||
Sbjct 3263801 TGGA--GCCCAGTGACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCAT 3263858
Query 178028 CCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087
||| || |||||||| | || ||||| || || || ||||| |||||||| | |||||
Sbjct 3263859 CCCCCCAGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCT 3263918
Query 178088 TGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
| | ||||| ||| |||| ||||| || || ||||| || ||| || | || ||
Sbjct 3263919 TTCTGATTACAACATCCAGAAAGAGTCGACCCTGCACCTGGTTCTGCGTCTGAG 3263972
Score = 141 bits (156), Expect = 2e-28
Identities = 158/209 (76%), Gaps = 4/209 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || |||||||| || || || || || || |||||||| |||||||| || |||
Sbjct 3263983 CAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 3264040
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
|||||||||| || || || ||||| ||||| || || || ||||| || |||||||
Sbjct 3264041 ACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCAGACCAGC 3264100
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | || ||||| || || || ||||| |||||||| | |||||| | ||||| |||
Sbjct 3264101 AGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACA 3264160
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTT 178130
|||| ||||| || || || ||||| |||
Sbjct 3264161 TCCAGAAAGAGTCCACTCTCCATCTGGTT 3264189
>seq525
Length=1461377
Score = 141 bits (156), Expect = 2e-28
Identities = 165/221 (75%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || |||||||| || | || || || || |||||||| |||||||| || |||
Sbjct 453315 CAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 453372
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||||||||| ||||| ||||| ||||||||||| || ||||| || |||||||
Sbjct 453373 ACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAGC 453432
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | | ||||| ||||| |||||||| |||||||| | || || | || || |||
Sbjct 453433 AGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACA 453492
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||| || || || || ||||| || || | | ||||||
Sbjct 453493 TCCAGAAGGAGTCCACGCTGCACCTGGTCCTCCGCCTCAGA 453533
Score = 141 bits (156), Expect = 2e-28
Identities = 165/221 (75%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || |||||||| || | || || || || |||||||| |||||||| || |||
Sbjct 453543 CAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 453600
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||||||||| ||||| ||||| ||||||||||| || ||||| || |||||||
Sbjct 453601 ACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAGC 453660
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | | ||||| ||||| |||||||| |||||||| | || || | || || |||
Sbjct 453661 AGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACA 453720
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||| || || || || ||||| || || | | ||||||
Sbjct 453721 TCCAGAAGGAGTCCACGCTGCACCTGGTCCTCCGCCTCAGA 453761
Score = 141 bits (156), Expect = 2e-28
Identities = 165/221 (75%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || |||||||| || | || || || || |||||||| |||||||| || |||
Sbjct 453771 CAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 453828
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||||||||| ||||| ||||| ||||||||||| || ||||| || |||||||
Sbjct 453829 ACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAGC 453888
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | | ||||| ||||| |||||||| |||||||| | || || | || || |||
Sbjct 453889 AGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACA 453948
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||| || || || || ||||| || || | | ||||||
Sbjct 453949 TCCAGAAGGAGTCCACGCTGCACCTGGTCCTCCGCCTCAGA 453989
Score = 136 bits (150), Expect = 1e-26
Identities = 164/221 (74%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || ||||| || | || || || || |||||||| |||||||| || |||
Sbjct 453087 CAGATCTTTGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 453144
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||||||||| ||||| ||||| ||||||||||| || ||||| || |||||||
Sbjct 453145 ACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAGC 453204
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | | ||||| ||||| |||||||| |||||||| | || || | || || |||
Sbjct 453205 AGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACA 453264
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||| || || || || ||||| || || | | ||||||
Sbjct 453265 TCCAGAAGGAGTCCACGCTGCACCTGGTCCTCCGCCTCAGA 453305
Score = 136 bits (150), Expect = 1e-26
Identities = 156/208 (75%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || |||||||| || | || || || || |||||||| |||||||| || |||
Sbjct 453999 CAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 454056
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||||||||| ||||| ||||| ||||||||||| || ||||| || |||||||
Sbjct 454057 ACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAGC 454116
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | | ||||| ||||| |||||||| |||||||| | || || | || || |||
Sbjct 454117 AGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACA 454176
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| || || || || || || || ||
Sbjct 454177 TCCAGAAGGAGTCCACGCTCCACCTGGT 454204
>seq692
Length=1323805
Score = 116 bits (128), Expect = 9e-21
Identities = 158/216 (73%), Gaps = 6/216 (3%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| |||||||| || |||||||| || |||| | ||||| ||| ||| ||
Sbjct 820047 CAAATTTTTGTGAAAACCCTTACAGGAAAGACCATCAGTGTTGAGGTTGAACCCTCGGAT 819988
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || | | ||| ||||||||||| || |||| ||| ||||| || ||||
Sbjct 819987 ACAATAGAAAGTATGAAAGCCAAGATTCAGGATAAGGAAGAAATTCCTCCTGATGAGCAG 819928
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC-GATTATAACGT 178102
| | ||||| || || || || || ||||||||| | ||| ||||| || || ||| |
Sbjct 819927 AGTTTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACT-TTGCCTGACTACAACAT 819869
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||||| || || |||| ||||| | ||||||||
Sbjct 819868 TCAAAAGGAGTC--CACTTCATCTCG--TTGAGACT 819837
>seq194
Length=5677166
Score = 104 bits (114), Expect = 6e-17
Identities = 151/213 (71%), Gaps = 8/213 (4%)
Strand=Plus/Minus
Query 177927 ATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACC 177986
||||||||||||||||| | || || || ||||| || ||||| ||| ||| | ||
Sbjct 189256 ATTTTCGTGAAAACTCTTATGGGGAAGACCATCACTCTTGAGGTTGAACCTTCAAATACA 189197
Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046
|| || || || || |||||||||| | ||||| | ||| || ||||| ||
Sbjct 189196 ATAGAAAATGTGAAGGCCAAGATTCAGG----ATCAGGAACTCTTCCTGATCAGCAGAGA 189141
Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106
| ||||| || || || || || ||||||||| | ||| | || || ||| | |||
Sbjct 189140 CCGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTTT----GACTACAACATTCAA 189085
Query 178107 AAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
|| || || || || |||||||| ||| |||||
Sbjct 189084 AAGGAGTCCACTCTCCATCTTGTGTTGGGACTC 189052
>seq316
Length=5774657
Score = 98.7 bits (108), Expect = 2e-15
Identities = 153/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCAC-AGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGA 177982
|| |||||| ||||||| | | ||||| | | ||||| |||||||| ||| || ||
Sbjct 2701467 CAGATTTTCATGAAAACCCATATGAGGAAGATC-ATCACTCTCGAGGTTGAACCCTTGGA 2701409
Query 177983 CACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042
|| || || || || || ||||||||||| || |||||| ||||| || |||||
Sbjct 2701408 TACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGAAAGGAACTCCTCCTGATCAGCA 2701349
Query 178043 ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGT 178102
|||| |||||| | | || || || ||||||||| ||| | | || | || | |
Sbjct 2701348 CAGACTGATCTTCTCTTGCAAGCAACTGGAAGATGGACATACTTTATCTGACTGTAGCAT 2701289
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||||| || || || || |||||| | ||| ||||
Sbjct 2701288 TCAAAAGGAGTCCACTCTTCATCTTCTGTTGCGACT 2701253
>seq102
Length=2770413
Score = 84.2 bits (92), Expect = 5e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 177927 ATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACC 177986
|||| |||| ||||||| | | || || ||||| |||||||||||| || || ||
Sbjct 1920998 ATTTCCGTGGAAACTCTTAGGGTGAAGACCATCACTCTCGAGGTGGAACCCTTGGATACA 1921057
Query 177987 ATCGAGAACGTCAAACAA-AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045
|| | || || ||| ||||||||||| || |||| ||| ||||| | ||||| |
Sbjct 1921058 ATAGGAAATGTTAAAGGCCAAGATTCAGGATAAGGAAGAAATTCCTCCTGTTCAGCAGAG 1921117
Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105
||| ||| | || || || | ||||||||| || | | || || ||| | ||
Sbjct 1921118 ACTGATCCTTGCTGGCCGGCA-ATTGAAGATGGACATCCTTTGACTGACTACAACATTCA 1921176
Query 178106 AAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||| || || | || ||||| || ||||||||
Sbjct 1921177 AAAGGAGTCCATTCTTCATCTCGTGTTGAGACT 1921209
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203509373781302
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |