Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq649 154 4e-32 seq525 141 2e-28 seq692 116 9e-21 seq194 104 6e-17 seq316 98.7 2e-15 seq102 84.2 5e-11 >seq649 Length=3559941 Score = 154 bits (170), Expect = 4e-32 Identities = 176/234 (75%), Gaps = 7/234 (3%) Strand=Plus/Plus Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969 |||| ||||||| |||| |||||||| || || || || || || |||||||| |||| Sbjct 3263744 AGGTCAAAATGC---AAATCTTCGTGAAGACCCTAACTGGCAAGACCATCACCCTGGAGG 3263800 Query 177970 TGGAAAGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027 |||| || ||| |||||||||| || || || ||||| ||||| || || || || Sbjct 3263801 TGGA--GCCCAGTGACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCAT 3263858 Query 178028 CCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087 ||| || |||||||| | || ||||| || || || ||||| |||||||| | ||||| Sbjct 3263859 CCCCCCAGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCT 3263918 Query 178088 TGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141 | | ||||| ||| |||| ||||| || || ||||| || ||| || | || || Sbjct 3263919 TTCTGATTACAACATCCAGAAAGAGTCGACCCTGCACCTGGTTCTGCGTCTGAG 3263972 Score = 141 bits (156), Expect = 2e-28 Identities = 158/209 (76%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || || || || || || |||||||| |||||||| || ||| Sbjct 3263983 CAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 3264040 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||||||||| || || || ||||| ||||| || || || ||||| || ||||||| Sbjct 3264041 ACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCAGACCAGC 3264100 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| || || || ||||| |||||||| | |||||| | ||||| ||| Sbjct 3264101 AGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACA 3264160 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTT 178130 |||| ||||| || || || ||||| ||| Sbjct 3264161 TCCAGAAAGAGTCCACTCTCCATCTGGTT 3264189 >seq525 Length=1461377 Score = 141 bits (156), Expect = 2e-28 Identities = 165/221 (75%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || | || || || || |||||||| |||||||| || ||| Sbjct 453315 CAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 453372 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||| ||||| ||||| ||||||||||| || ||||| || ||||||| Sbjct 453373 ACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAGC 453432 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | | ||||| ||||| |||||||| |||||||| | || || | || || ||| Sbjct 453433 AGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACA 453492 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| || || || || ||||| || || | | |||||| Sbjct 453493 TCCAGAAGGAGTCCACGCTGCACCTGGTCCTCCGCCTCAGA 453533 Score = 141 bits (156), Expect = 2e-28 Identities = 165/221 (75%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || | || || || || |||||||| |||||||| || ||| Sbjct 453543 CAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 453600 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||| ||||| ||||| ||||||||||| || ||||| || ||||||| Sbjct 453601 ACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAGC 453660 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | | ||||| ||||| |||||||| |||||||| | || || | || || ||| Sbjct 453661 AGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACA 453720 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| || || || || ||||| || || | | |||||| Sbjct 453721 TCCAGAAGGAGTCCACGCTGCACCTGGTCCTCCGCCTCAGA 453761 Score = 141 bits (156), Expect = 2e-28 Identities = 165/221 (75%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || | || || || || |||||||| |||||||| || ||| Sbjct 453771 CAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 453828 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||| ||||| ||||| ||||||||||| || ||||| || ||||||| Sbjct 453829 ACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAGC 453888 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | | ||||| ||||| |||||||| |||||||| | || || | || || ||| Sbjct 453889 AGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACA 453948 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| || || || || ||||| || || | | |||||| Sbjct 453949 TCCAGAAGGAGTCCACGCTGCACCTGGTCCTCCGCCTCAGA 453989 Score = 136 bits (150), Expect = 1e-26 Identities = 164/221 (74%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || | || || || || |||||||| |||||||| || ||| Sbjct 453087 CAGATCTTTGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 453144 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||| ||||| ||||| ||||||||||| || ||||| || ||||||| Sbjct 453145 ACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAGC 453204 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | | ||||| ||||| |||||||| |||||||| | || || | || || ||| Sbjct 453205 AGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACA 453264 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| || || || || ||||| || || | | |||||| Sbjct 453265 TCCAGAAGGAGTCCACGCTGCACCTGGTCCTCCGCCTCAGA 453305 Score = 136 bits (150), Expect = 1e-26 Identities = 156/208 (75%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || | || || || || |||||||| |||||||| || ||| Sbjct 453999 CAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 454056 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||| ||||| ||||| ||||||||||| || ||||| || ||||||| Sbjct 454057 ACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAGC 454116 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | | ||||| ||||| |||||||| |||||||| | || || | || || ||| Sbjct 454117 AGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACA 454176 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || || || || Sbjct 454177 TCCAGAAGGAGTCCACGCTCCACCTGGT 454204 >seq692 Length=1323805 Score = 116 bits (128), Expect = 9e-21 Identities = 158/216 (73%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| |||||||| || |||||||| || |||| | ||||| ||| ||| || Sbjct 820047 CAAATTTTTGTGAAAACCCTTACAGGAAAGACCATCAGTGTTGAGGTTGAACCCTCGGAT 819988 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || | | ||| ||||||||||| || |||| ||| ||||| || |||| Sbjct 819987 ACAATAGAAAGTATGAAAGCCAAGATTCAGGATAAGGAAGAAATTCCTCCTGATGAGCAG 819928 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC-GATTATAACGT 178102 | | ||||| || || || || || ||||||||| | ||| ||||| || || ||| | Sbjct 819927 AGTTTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACT-TTGCCTGACTACAACAT 819869 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||| || || |||| ||||| | |||||||| Sbjct 819868 TCAAAAGGAGTC--CACTTCATCTCG--TTGAGACT 819837 >seq194 Length=5677166 Score = 104 bits (114), Expect = 6e-17 Identities = 151/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 177927 ATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACC 177986 ||||||||||||||||| | || || || ||||| || ||||| ||| ||| | || Sbjct 189256 ATTTTCGTGAAAACTCTTATGGGGAAGACCATCACTCTTGAGGTTGAACCTTCAAATACA 189197 Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046 || || || || || |||||||||| | ||||| | ||| || ||||| || Sbjct 189196 ATAGAAAATGTGAAGGCCAAGATTCAGG----ATCAGGAACTCTTCCTGATCAGCAGAGA 189141 Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106 | ||||| || || || || || ||||||||| | ||| | || || ||| | ||| Sbjct 189140 CCGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTTT----GACTACAACATTCAA 189085 Query 178107 AAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || || || || |||||||| ||| ||||| Sbjct 189084 AAGGAGTCCACTCTCCATCTTGTGTTGGGACTC 189052 >seq316 Length=5774657 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCAC-AGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGA 177982 || |||||| ||||||| | | ||||| | | ||||| |||||||| ||| || || Sbjct 2701467 CAGATTTTCATGAAAACCCATATGAGGAAGATC-ATCACTCTCGAGGTTGAACCCTTGGA 2701409 Query 177983 CACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042 || || || || || || ||||||||||| || |||||| ||||| || ||||| Sbjct 2701408 TACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGAAAGGAACTCCTCCTGATCAGCA 2701349 Query 178043 ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGT 178102 |||| |||||| | | || || || ||||||||| ||| | | || | || | | Sbjct 2701348 CAGACTGATCTTCTCTTGCAAGCAACTGGAAGATGGACATACTTTATCTGACTGTAGCAT 2701289 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||| || || || || |||||| | ||| |||| Sbjct 2701288 TCAAAAGGAGTCCACTCTTCATCTTCTGTTGCGACT 2701253 >seq102 Length=2770413 Score = 84.2 bits (92), Expect = 5e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 177927 ATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACC 177986 |||| |||| ||||||| | | || || ||||| |||||||||||| || || || Sbjct 1920998 ATTTCCGTGGAAACTCTTAGGGTGAAGACCATCACTCTCGAGGTGGAACCCTTGGATACA 1921057 Query 177987 ATCGAGAACGTCAAACAA-AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 || | || || ||| ||||||||||| || |||| ||| ||||| | ||||| | Sbjct 1921058 ATAGGAAATGTTAAAGGCCAAGATTCAGGATAAGGAAGAAATTCCTCCTGTTCAGCAGAG 1921117 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 ||| ||| | || || || | ||||||||| || | | || || ||| | || Sbjct 1921118 ACTGATCCTTGCTGGCCGGCA-ATTGAAGATGGACATCCTTTGACTGACTACAACATTCA 1921176 Query 178106 AAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||| || || | || ||||| || |||||||| Sbjct 1921177 AAAGGAGTCCATTCTTCATCTCGTGTTGAGACT 1921209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203509373781302