Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailuropoda_20melanoleuca_20[refseq_20GCF_5F000004335.2_202009-12-15] 81,467 sequences; 2,299,509,015 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq590 111 2e-19 >seq590 Length=1172511 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 16224 CTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCT 16283 |||| ||||||||||| ||||| |||||||| || | || ||||| |||| ||||| Sbjct 827238 CTTCATCTCTGCTGATGAGTTCATTGGAAAACGTGAGTCCAGGCATAAGACCTCTTTTCT 827179 Query 16284 TTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAG 16343 ||| ||||||||| |||||||| || ||||| ||||| || || || |||| ||||||| Sbjct 827178 TTAGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATCCCTTCTACAGCAGCAAAAG 827119 Query 16344 CGATTAATCGTTCC 16357 | | | || |||| Sbjct 827118 CCACCACTCTTTCC 827105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510893607538440