Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailuropoda_20melanoleuca_20[refseq_20GCF_5F000004335.2_202009-12-15]
81,467 sequences; 2,299,509,015 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq137 95.1 2e-14
>seq137
Length=2511308
Score = 95.1 bits (104), Expect = 2e-14
Identities = 103/133 (77%), Gaps = 4/133 (3%)
Strand=Plus/Minus
Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116
|||||||||||||| ||||| ||||| || |||||||| ||||||||| | || |||||
Sbjct 222073 GCATTTTTTGGAGCACAGCTGAATTCCTTCATCCATGTGATTATGTACTCATACTATGGG 222014
Query 52117 ATGGCCGCTTGTGGTCCTATG--TTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTA 52174
| | || | ||| || ||| | ||||| |||||| ||||||||||| || | || |
Sbjct 222013 TTAACTGCATTTGGCCC-ATGGATCCAGAA-GTATCTTTGGTGGAAACGATACTTGACCA 221956
Query 52175 TAATGCAGTTGGT 52187
| ||||| ||||
Sbjct 221955 TGTTGCAGCTGGT 221943
Score = 93.3 bits (102), Expect = 8e-14
Identities = 107/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 52185 GGTACAGTTCCATATAGCTATAGGACATACTGCTATGTCCATTTACATAGATTGCCCGTT 52244
||| ||||||||| | | || ||||| || || |||| |||||| ||||| || ||
Sbjct 219513 GGTTCAGTTCCATGTGACCATTGGACACACAGCACTGTCTCTTTACACGGATTGTCCCTT 219454
Query 52245 TCCAAAATGGATACAGTGGTCAGTTATTATCTATTCTATTAGTTTCATATTACTGTTTGG 52304
||||||||||| || ||| | | ||| ||| | || || |||||||| || |||
Sbjct 219453 CCCAAAATGGATGCACTGGGCCCTCATTGCCTACGCGATCAGCTTCATATTTCTCTTTCT 219394
Query 52305 TAACTTCTATTTTAGAACATACAA 52328
|||||||||| || | ||||||||
Sbjct 219393 TAACTTCTATGTTCGGACATACAA 219370
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 922256674078680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |