Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailuropoda_20melanoleuca_20[refseq_20GCF_5F000004335.2_202009-12-15] 81,467 sequences; 2,299,509,015 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq592 143 2e-29 >seq592 Length=1169299 Score = 143 bits (158), Expect = 2e-29 Identities = 141/182 (77%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 ||||||| |||| ||| || |||| || || || |||||||||||||||||||| || | Sbjct 485545 TCAGGCCGGTGATGTGCGCAATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGG 485604 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108 | || || ||||||||||| | ||||||||||||||||||||||||||||| || Sbjct 485605 GCACGCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCAGGACAGCTCGCCGTTCA 485664 Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGG 21168 ||||||| ||||| || | | || || ||||| || |||||| | | || || | || Sbjct 485665 CCACGTAGAACTGGCAGAGGGCATGGCACGGAGGAAGGGCCATCAGAGGAAGATCTGAGG 485724 Query 21169 GG 21170 || Sbjct 485725 GG 485726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427351270166160