Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailuropoda_20melanoleuca_20[refseq_20GCF_5F000004335.2_202009-12-15] 81,467 sequences; 2,299,509,015 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq497 93.3 3e-14 >seq497 Length=1337528 Score = 93.3 bits (102), Expect = 3e-14 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 |||||||||| ||||| ||||| || | |||||||| || ||||| | |||||||||| Sbjct 317705 TGGCCTTTGCCGCTGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCAATATTCTGGC 317764 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 | ||||||||| || ||||| || | |||||||||| || | |||||| | || | Sbjct 317765 TCAAGAAACGTGGCCTGATGCCTGGCCTCACGTTTTCCAATGAACTTATTAGCAGAGATG 317824 Query 22868 A 22868 | Sbjct 317825 A 317825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355879903117201