Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailuropoda_20melanoleuca_20[refseq_20GCF_5F000004335.2_202009-12-15]
81,467 sequences; 2,299,509,015 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq497 102 8e-17
>seq497
Length=1337528
Score = 102 bits (112), Expect = 8e-17
Identities = 95/121 (79%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953
|||||||||| ||||||||||| || ||||| || | || ||||||| || ||||| |
Sbjct 317827 CCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCACGTTTCT 317768
Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013
| | ||| ||||||| ||||| || || |||||||| ||||| || || || ||||| |
Sbjct 317767 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCGGCAAAGG 317708
Query 14014 C 14014
|
Sbjct 317707 C 317707
Score = 100 bits (110), Expect = 3e-16
Identities = 107/139 (77%), Gaps = 2/139 (1%)
Strand=Plus/Minus
Query 13524 TAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTGT-TAGAAATAACGCCCATTTT 13582
|| || ||| |||| || | |||| ||| || | || | | || || || ||||| |
Sbjct 319049 TAGAAGTCAGCATCCAAGGTAAAAGAATTCTC-TGTTGGACTTGACATCACTCCCATCCT 318991
Query 13583 TTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13642
||||| || | ||||| || |||||||||||||| || ||||||||||| ||||| ||
Sbjct 318990 CTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTC 318931
Query 13643 CATAAAATCAAATGGATTT 13661
|||||| ||||||||||||
Sbjct 318930 CATAAAGTCAAATGGATTT 318912
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479239474987800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |