Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailuropoda_20melanoleuca_20[refseq_20GCF_5F000004335.2_202009-12-15]
81,467 sequences; 2,299,509,015 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
seq328 143 2e-29
>seq328
Length=1672696
Score = 143 bits (158), Expect = 2e-29
Identities = 123/152 (81%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933
|| ||||| || ||||| || | || |||||||| |||||||||||||| |||||||||
Sbjct 136832 GGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACTTGGAGGAGGTGATG 136891
Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993
|| ||||| || || |||| || |||||||| |||||||| ||||| ||||| ||||||
Sbjct 136892 CCCCAGGCTGAGAACCACGACCCAGACATCAAGGAGCACGTGAACTCCCTGGGGGAAAAG 136951
Query 128994 CTCAAAACGCTGCGTCTTCGACTGCGTCGCTG 129025
|| || || ||||| || | ||||| |||||
Sbjct 136952 CTGAAGACTCTGCGGCTGAGGCTGCGCCGCTG 136983
Score = 82.4 bits (90), Expect = 7e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 129092 GCTGCAGGAACGAGGCGTTTACAAGGCCATGAGCGAGTTCGACATATTCATCAACTACAT 129151
||| || || |||| || ||||| |||||||| ||||| ||||| ||||||||||||||
Sbjct 139144 GCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACAT 139203
Query 129152 AGAATCATACATGAC 129166
|||| | ||||||||
Sbjct 139204 AGAAACCTACATGAC 139218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447294438977040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |