Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailuropoda_20melanoleuca_20[refseq_20GCF_5F000004335.2_202009-12-15]
81,467 sequences; 2,299,509,015 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq328 118 9e-22
>seq328
Length=1672696
Score = 118 bits (130), Expect = 9e-22
Identities = 112/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230
|| |||||||| |||| |||||||| ||||| ||| | || ||||| ||||| |||||
Sbjct 136841 GGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACTTGGAGGAGGTGATGCCCCAGGCT 136900
Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290
|| || |||| || ||||| || || ||||| || |||||||| ||||||||||||||
Sbjct 136901 GAGAACCACGACCCAGACATCAAGGAGCACGTGAACTCCCTGGGGGAAAAGCTGAAGACT 136960
Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313
|| | || | ||||| |||||
Sbjct 136961 CTGCGGCTGAGGCTGCGCCGCTG 136983
Score = 89.7 bits (98), Expect = 4e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 127379 AGCTTCAGGAAAGAGGCGTGTACAAGGCCATGAGTGAGTTTGACATATTCATCAACTACA 127438
|||| || || ||||| || ||||| |||||||||||||||||||| |||||||||||||
Sbjct 139143 AGCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 139202
Query 127439 TCGAGACTTACATG 127452
| || || ||||||
Sbjct 139203 TAGAAACCTACATG 139216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429627407990504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |