Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailuropoda_20melanoleuca_20[refseq_20GCF_5F000004335.2_202009-12-15] 81,467 sequences; 2,299,509,015 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq328 118 9e-22 >seq328 Length=1672696 Score = 118 bits (130), Expect = 9e-22 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230 || |||||||| |||| |||||||| ||||| ||| | || ||||| ||||| ||||| Sbjct 136841 GGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACTTGGAGGAGGTGATGCCCCAGGCT 136900 Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290 || || |||| || ||||| || || ||||| || |||||||| |||||||||||||| Sbjct 136901 GAGAACCACGACCCAGACATCAAGGAGCACGTGAACTCCCTGGGGGAAAAGCTGAAGACT 136960 Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313 || | || | ||||| ||||| Sbjct 136961 CTGCGGCTGAGGCTGCGCCGCTG 136983 Score = 89.7 bits (98), Expect = 4e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 127379 AGCTTCAGGAAAGAGGCGTGTACAAGGCCATGAGTGAGTTTGACATATTCATCAACTACA 127438 |||| || || ||||| || ||||| |||||||||||||||||||| ||||||||||||| Sbjct 139143 AGCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 139202 Query 127439 TCGAGACTTACATG 127452 | || || |||||| Sbjct 139203 TAGAAACCTACATG 139216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429627407990504