Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailuropoda_20melanoleuca_20[refseq_20GCF_5F000004335.2_202009-12-15]
81,467 sequences; 2,299,509,015 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq592 123 2e-23
>seq592
Length=1169299
Score = 123 bits (136), Expect = 2e-23
Identities = 127/165 (77%), Gaps = 1/165 (1%)
Strand=Plus/Plus
Query 25491 AGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGT 25550
|| ||||| | || || |||||||| ||||| || ||||||||||||||| |||||
Sbjct 485547 AGGCCGGTGATGTGCGCAATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 485606
Query 25551 ACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCT 25610
|| || | ||||||| |||||||||||||||| ||||| || || ||||| |||
Sbjct 485607 ACGCCCAGGCCCATGT-CCCCCGACCTCTGGTACAGCTGGCAGGACAGCTCGCCGTTCAC 485665
Query 25611 CACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAG 25655
|||||| ||||| || | || | |||||||||||| || || ||
Sbjct 485666 CACGTAGAACTGGCAGAGGGCATGGCACGGAGGAAGGGCCATCAG 485710
Score = 104 bits (114), Expect = 2e-17
Identities = 126/169 (75%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832
||| || |||| ||||| || |||| ||||||||| || || || || || |||| ||
Sbjct 488136 CATATCTTTGTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATC 488195
Query 25833 TCCATCTTCCCTG-TGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGT 25891
|| ||||| ||| ||| || || || ||||| ||||||| || ||||||||||
Sbjct 488196 CCCTTCTTCTCTGCTGCAGAATCCCAGGCTG-TCCAAGAAGTCTCGAGACCCATTGGCGT 488254
Query 25892 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940
||||||| || || ||||| || ||||| || | ||||||||||||
Sbjct 488255 CCCAGATTTTCACTCCCTTGGAAGACAGCTCCTTAGCGTTTGTGGACCC 488303
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 339799884498591
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |