Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailuropoda_20melanoleuca_20[refseq_20GCF_5F000004335.2_202009-12-15]
81,467 sequences; 2,299,509,015 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq3057 96.9 9e-15
seq497 84.2 6e-11
>seq3057
Length=47849
Score = 96.9 bits (106), Expect = 9e-15
Identities = 113/153 (74%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170
|| ||| |||| |||| ||||||||| || || |||| |||||||| || || || |||
Sbjct 3998 GCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACAGAGACAGGTACCCCGTACATG 4057
Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230
| ||||||||||| || || || ||| |||||||||| |||| || || || |
Sbjct 4058 CTCTACAAAGATTCCTGTAATCGGAAGAGCAACCAGCAGAACCTGGGAACGATCAAATGC 4117
Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263
|||||||| || || || || | || || |||
Sbjct 4118 AGCAACCTGTGCACAGAAATAGTAGAGTATACC 4150
Score = 95.1 bits (104), Expect = 3e-14
Identities = 109/147 (74%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897
||||| |||||||| || || |||||| ||| || ||||||||||||||||| |
Sbjct 2506 GGGGCATTTGCTATTTACCTGGAGCCTTGGCATTTAGACATTTTTGAGTTTCTTGATTTA 2565
Query 363898 CGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTT 363957
||| ||||| ||||| || ||| |||||| | || || |||| ||| |||||| ||
Sbjct 2566 AAGAAGAACACAGGAAAGGAAGAACAGCGTGCCAGGGACCTTTTCTTTGCGCTTTGGATT 2625
Query 363958 TCTGACCATTTTATGAAGCGCGTGGAG 363984
| || | || ||||| || ||||||
Sbjct 2626 CCAGATCTCTTCATGAAACGAGTGGAG 2652
>seq497
Length=1337528
Score = 84.2 bits (92), Expect = 6e-11
Identities = 91/121 (75%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 22501 GCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTa 22560
|| ||||| | || ||||| || ||||||||||| | ||| |||| || |||||
Sbjct 317707 GCCTTTGCCGCTGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCAATATTCTGGCTC 317766
Query 22561 aaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAG 22620
|| ||||||| | ||||| || || |||||||| ||||| | |||||| ||||||||
Sbjct 317767 AAGAAACGTGGCCTGATGCCTGGCCTCACGTTTTCCAATGAACTTATTAGCAGAGATGAG 317826
Query 22621 G 22621
|
Sbjct 317827 G 317827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1301993164807194
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |