Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailuropoda_20melanoleuca_20[refseq_20GCF_5F000004335.2_202009-12-15]
81,467 sequences; 2,299,509,015 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq456 87.8 2e-12
>seq456
Length=1409724
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || ||||| || ||||||||||| | ||| || |||||| || || || ||
Sbjct 1113607 GTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 1113548
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| ||||||| | ||| ||||| || || ||||| ||||| || ||||| ||
Sbjct 1113547 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTGGCCTTC 1113488
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||| ||| || || |||| ||| | || ||||| ||||| ||
Sbjct 1113487 ACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTC 1113428
Query 114366 TTTACAAAAATCTGCATG 114383
|| || || |||||||||
Sbjct 1113427 TTCACGAAGATCTGCATG 1113410
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || ||||| || ||||||||||| | ||| || |||||| || || || ||
Sbjct 1113835 GTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 1113776
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| ||||||| | ||| ||||| || || ||||| ||||| || ||||| ||
Sbjct 1113775 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTGGCCTTC 1113716
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||| ||| || || |||| ||| | || ||||| ||||| ||
Sbjct 1113715 ACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTC 1113656
Query 114366 TTTACAAAAATCTGCATG 114383
|| || || |||||||||
Sbjct 1113655 TTCACGAAGATCTGCATG 1113638
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || ||||| || ||||||||||| | ||| || |||||| || || || ||
Sbjct 1114063 GTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 1114004
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| ||||||| | ||| ||||| || || ||||| ||||| || ||||| ||
Sbjct 1114003 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTGGCCTTC 1113944
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||| ||| || || |||| ||| | || ||||| ||||| ||
Sbjct 1113943 ACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTC 1113884
Query 114366 TTTACAAAAATCTGCATG 114383
|| || || |||||||||
Sbjct 1113883 TTCACGAAGATCTGCATG 1113866
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || ||||| || ||||||||||| | ||| || |||||| || || || ||
Sbjct 1114291 GTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 1114232
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| ||||||| | ||| ||||| || || ||||| ||||| || ||||| ||
Sbjct 1114231 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTGGCCTTC 1114172
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||| ||| || || |||| ||| | || ||||| ||||| ||
Sbjct 1114171 ACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTC 1114112
Query 114366 TTTACAAAAATCTGCATG 114383
|| || || |||||||||
Sbjct 1114111 TTCACGAAGATCTGCATG 1114094
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || ||||| || ||||||||||| | ||| || |||||| || || || ||
Sbjct 1113379 GTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 1113320
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| ||||||| | ||| ||||| || || ||||| ||||| || ||||| ||
Sbjct 1113319 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTGGCCTTC 1113260
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||| ||| || || |||| ||| | || ||||| ||||| ||
Sbjct 1113259 ACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTC 1113200
Query 114366 TTTACAAAAATCTGCAT 114382
|| || || ||||||||
Sbjct 1113199 TTCACGAAGATCTGCAT 1113183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419717257350804
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |